| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is nitA [H]
Identifier: 77458796
GI number: 77458796
Start: 2947716
End: 2948639
Strand: Direct
Name: nitA [H]
Synonym: Pfl01_2571
Alternate gene names: 77458796
Gene position: 2947716-2948639 (Clockwise)
Preceding gene: 77458794
Following gene: 77458800
Centisome position: 45.78
GC content: 64.5
Gene sequence:
>924_bases ATGCCCAAATCAATCGTTGCCGCCCTGCAGATCGGCGCCTTGCCCGGTGGCAAGGCTGAAACCCTGGAACAGATCCTGAG CTGGGAAACCGCGATCATCGAATCCGGCGCCGCGCTGGTGGTAATGCCCGAAGCCTTGCTCGGTGGTTACCCGAAAGGCG AGGGCTTCGGCACGCAGCTGGGTTATCGCTTGCCGGAAGGCCGCGAGGCCTACGCCCGTTACTTCGCCAACGCTATCGAC GTGCCGGGGGCGGAAACCGAAGCGCTGGCCGGTCTGTCGGCACGTACCGGGGCCAATCTGGTGATCGGCGTGATCGAACG GGCCGGCAGCACTTTGCATTGCACCGCGCTGTATTTCGACCCGCAGGCCGGCCTAGTGGCCAAGCACCGCAAGTTGATGC CGACCGGCACCGAGCGGCTGATCTGGGGCAAGGGCGACGGTTCAACGTTGCCGGTGCTCGACACGCAGGTCGGCAAGCTC GGCGCAGTGATCTGCTGGGAAAACATGATGCCGCTGCTGCGCACGGCGATGTACGCCAAGGGCATTGAAGTGTGGTGTGC GCCGACTGTGGATGAGCGCGAGATGTGGCAGGTCAGCATGCGTCACATCGCCCATGAAGGGCGCTGCTTCGTGGTCAGCG CCTGTCAGGTGCAGGCCTCGCCGAATGATCTGGGCGTGGAAATTGACAACTGGCCGGGAGATCGACCGCTGATCGCCGGC GGCAGCGTGATCGTCGGGCCGATGGGCGACGTATTGGCCGGGCCGTTGCGCGGCGAGGCCGGCTTGCTCACCGCCGAGAT CGACACGGAAGAACTGGTGCGCGCCCGCTACGACTACGACGTGGTCGGCCACTATGCACGGCCCGATGTGTTCGAGCTGA GCGTCGATGAGCGGGCTAAACCCGGTGTACGTTTCACCACTTGA
Upstream 100 bases:
>100_bases TATTCATTTGGCTCATATCATTCAGCAGTGGATCGGTCTTTATTCATGATCCCGTGGCGTCGGAGAATCAGCAACACCTG AACTTCACGGAGTGACCGCC
Downstream 100 bases:
>100_bases CGACGGTGCGGTTTACCAGGTGGCAGCACTGGCCCTGGGCAGACTGAGCTTGCCGGTATCGACAAAGCGCATCGTGCCAA ACAACCCGCCCGCCAGTTTG
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPKSIVAALQIGALPGGKAETLEQILSWETAIIESGAALVVMPEALLGGYPKGEGFGTQLGYRLPEGREAYARYFANAID VPGAETEALAGLSARTGANLVIGVIERAGSTLHCTALYFDPQAGLVAKHRKLMPTGTERLIWGKGDGSTLPVLDTQVGKL GAVICWENMMPLLRTAMYAKGIEVWCAPTVDEREMWQVSMRHIAHEGRCFVVSACQVQASPNDLGVEIDNWPGDRPLIAG GSVIVGPMGDVLAGPLRGEAGLLTAEIDTEELVRARYDYDVVGHYARPDVFELSVDERAKPGVRFTT
Sequences:
>Translated_307_residues MPKSIVAALQIGALPGGKAETLEQILSWETAIIESGAALVVMPEALLGGYPKGEGFGTQLGYRLPEGREAYARYFANAID VPGAETEALAGLSARTGANLVIGVIERAGSTLHCTALYFDPQAGLVAKHRKLMPTGTERLIWGKGDGSTLPVLDTQVGKL GAVICWENMMPLLRTAMYAKGIEVWCAPTVDEREMWQVSMRHIAHEGRCFVVSACQVQASPNDLGVEIDNWPGDRPLIAG GSVIVGPMGDVLAGPLRGEAGLLTAEIDTEELVRARYDYDVVGHYARPDVFELSVDERAKPGVRFTT >Mature_306_residues PKSIVAALQIGALPGGKAETLEQILSWETAIIESGAALVVMPEALLGGYPKGEGFGTQLGYRLPEGREAYARYFANAIDV PGAETEALAGLSARTGANLVIGVIERAGSTLHCTALYFDPQAGLVAKHRKLMPTGTERLIWGKGDGSTLPVLDTQVGKLG AVICWENMMPLLRTAMYAKGIEVWCAPTVDEREMWQVSMRHIAHEGRCFVVSACQVQASPNDLGVEIDNWPGDRPLIAGG SVIVGPMGDVLAGPLRGEAGLLTAEIDTEELVRARYDYDVVGHYARPDVFELSVDERAKPGVRFTT
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17557111, Length=305, Percent_Identity=46.8852459016393, Blast_Score=285, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6322027, Length=197, Percent_Identity=63.9593908629442, Blast_Score=258, Evalue=8e-70, Organism=Saccharomyces cerevisiae, GI6322026, Length=119, Percent_Identity=46.218487394958, Blast_Score=103, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000132 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.5.7 [H]
Molecular weight: Translated: 32889; Mature: 32758
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00921 NITRIL_CHT_2 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSIVAALQIGALPGGKAETLEQILSWETAIIESGAALVVMPEALLGGYPKGEGFGTQL CCCHHEEHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCCCCCC GYRLPEGREAYARYFANAIDVPGAETEALAGLSARTGANLVIGVIERAGSTLHCTALYFD CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEHHHCCCEEEEEEEEEC PQAGLVAKHRKLMPTGTERLIWGKGDGSTLPVLDTQVGKLGAVICWENMMPLLRTAMYAK CCCCHHHHHHCCCCCCCCEEEEECCCCCCCCEECCCCCHHEEEEEHHHHHHHHHHHHHHC GIEVWCAPTVDEREMWQVSMRHIAHEGRCFVVSACQVQASPNDLGVEIDNWPGDRPLIAG CCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCEEEC GSVIVGPMGDVLAGPLRGEAGLLTAEIDTEELVRARYDYDVVGHYARPDVFELSVDERAK CCEEECCCHHHHCCCCCCCCCEEEEECCHHHHHHHHCCHHHCCCCCCCCEEEECCCCCCC PGVRFTT CCCEECC >Mature Secondary Structure PKSIVAALQIGALPGGKAETLEQILSWETAIIESGAALVVMPEALLGGYPKGEGFGTQL CCHHEEHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCCCCCC GYRLPEGREAYARYFANAIDVPGAETEALAGLSARTGANLVIGVIERAGSTLHCTALYFD CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEHHHCCCEEEEEEEEEC PQAGLVAKHRKLMPTGTERLIWGKGDGSTLPVLDTQVGKLGAVICWENMMPLLRTAMYAK CCCCHHHHHHCCCCCCCCEEEEECCCCCCCCEECCCCCHHEEEEEHHHHHHHHHHHHHHC GIEVWCAPTVDEREMWQVSMRHIAHEGRCFVVSACQVQASPNDLGVEIDNWPGDRPLIAG CCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCEEEC GSVIVGPMGDVLAGPLRGEAGLLTAEIDTEELVRARYDYDVVGHYARPDVFELSVDERAK CCEEECCCHHHHCCCCCCCCCEEEEECCHHHHHHHHCCHHHCCCCCCCCEEEECCCCCCC PGVRFTT CCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400390 [H]