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The map label for this gene is ydeR [H]

Identifier: 77458674

GI number: 77458674

Start: 2802343

End: 2803542

Strand: Direct

Name: ydeR [H]

Synonym: Pfl01_2449

Alternate gene names: 77458674

Gene position: 2802343-2803542 (Clockwise)

Preceding gene: 77458669

Following gene: 77458675

Centisome position: 43.53

GC content: 65.75

Gene sequence:

>1200_bases
ATGCTTACGGGCAATCCGGCAGCGGCGGCCAAGGCCGAACCATCCGCTTCTCTTTCCGGCCTGATGGTCGCGTTCCTGGC
ATTCTGCTGCGGCGCGGTCGTGGCCAACCTTTATTACGCTCAGCCGATCGTCGAACTGATCGCGCCGCAGATCGGCCTGT
CCAGTGCCAATGCCAGTCTGATCGTTTCCCTCACGCAGTTCGGTTATGCATTGGGCCTGCTGTTGCTGGTGCCGCTGGCC
GACCTGATGGAAAACCGTCGGCTGGTGGTGGGCTTTACCCTGGCGGCGAGCGTGACCCTGTTGTGCGCCGGCCTGACGCA
CTCGCCGTCGATGTTCCTGGTCCTGTCGTTGCTGATCGGCCTCACTTCGGTGGCGGTGCAGATTCTGGTGCCGTTGGCCG
CGCATCTGGCGCCCGAGGCGACCCGTGGGCGGGTGGTGGGCAACATCATGAGCGGCCTGTTGCTGGGCATTCTGCTGTCG
CGGCCACTGTCGAGTCTGCTGGTGGAAGTGTTCGGCTGGCGCGGTGTGTTTTTCAGCGCAGCGGCGCTGATGGCTGTCAT
CGCCCTGATCATGGCGATTGCCTTGCCGCGCCGCGTCCCGAGCCATCAGGCGACGTACGCTGCGCTGATCGGCTCGGTGT
TTGCGCTGGCCCGTCGGCACGCGGTTCTGCGTCAGCGTTCGCTGTATCAGGGCTTGCTGTTCGCCAGTTTCAGCCTGTTC
TGGACCCTTGCACCGATCGAGCTGATGCGGCACCACGGTTTCAGTCAGGCACAGGTGGCGATATTTGCATTGGTTGGCGC
TGTCGGCGCGGTCGCAGCGCCGATTGCCGGGCGCCTGGCCGATGCCGGGCACGGTCGGCGCGGGACGCTCGTGGCACTGT
TGCTGGCGCCAGCCTCGTTGCTGATCGCCGCGCTGCCGGGCAGCAGCTATGTCTGGCTGGTGGTTTGCGCGGTGCTGCTG
GACTTCGCCGTGCAACTGAACATGGTGCTGGGCCAGCGCGAGGTGTACGCCATCGACCCGCACAGCCGGGCCCGCCTGAA
TGCCGTGTACATGACCAGCATCTTCGTCGGCGGCGCCCTGGGATCGCTGGTCGCCAGTCCGCTCTACGAGCATTTCGGCT
GGAACCTGTCCGCCGTGACCGTGGCGTTGCTGCCGGCGCTGGCCCTGGCGCTGTTCCTGAGCCGCAAGGCCGATGCCTGA

Upstream 100 bases:

>100_bases
GCATTTGGCGCATCACTCAATTGCCCGAGGAGTGGATACTCGAAGGCCGAAGCAGCCCTTAGCCTTGGCGTCACTTTTCC
AAACTCATCGAGGTGTCATC

Downstream 100 bases:

>100_bases
ACCGCAGGCACCGCTGAGTCCGATGAAGCACGGTCCTACAAGACGATCGGCGAACGGTGATGCACAATCATCACCGTTTC
CTTTCGATCGGGCTCCACTT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MLTGNPAAAAKAEPSASLSGLMVAFLAFCCGAVVANLYYAQPIVELIAPQIGLSSANASLIVSLTQFGYALGLLLLVPLA
DLMENRRLVVGFTLAASVTLLCAGLTHSPSMFLVLSLLIGLTSVAVQILVPLAAHLAPEATRGRVVGNIMSGLLLGILLS
RPLSSLLVEVFGWRGVFFSAAALMAVIALIMAIALPRRVPSHQATYAALIGSVFALARRHAVLRQRSLYQGLLFASFSLF
WTLAPIELMRHHGFSQAQVAIFALVGAVGAVAAPIAGRLADAGHGRRGTLVALLLAPASLLIAALPGSSYVWLVVCAVLL
DFAVQLNMVLGQREVYAIDPHSRARLNAVYMTSIFVGGALGSLVASPLYEHFGWNLSAVTVALLPALALALFLSRKADA

Sequences:

>Translated_399_residues
MLTGNPAAAAKAEPSASLSGLMVAFLAFCCGAVVANLYYAQPIVELIAPQIGLSSANASLIVSLTQFGYALGLLLLVPLA
DLMENRRLVVGFTLAASVTLLCAGLTHSPSMFLVLSLLIGLTSVAVQILVPLAAHLAPEATRGRVVGNIMSGLLLGILLS
RPLSSLLVEVFGWRGVFFSAAALMAVIALIMAIALPRRVPSHQATYAALIGSVFALARRHAVLRQRSLYQGLLFASFSLF
WTLAPIELMRHHGFSQAQVAIFALVGAVGAVAAPIAGRLADAGHGRRGTLVALLLAPASLLIAALPGSSYVWLVVCAVLL
DFAVQLNMVLGQREVYAIDPHSRARLNAVYMTSIFVGGALGSLVASPLYEHFGWNLSAVTVALLPALALALFLSRKADA
>Mature_399_residues
MLTGNPAAAAKAEPSASLSGLMVAFLAFCCGAVVANLYYAQPIVELIAPQIGLSSANASLIVSLTQFGYALGLLLLVPLA
DLMENRRLVVGFTLAASVTLLCAGLTHSPSMFLVLSLLIGLTSVAVQILVPLAAHLAPEATRGRVVGNIMSGLLLGILLS
RPLSSLLVEVFGWRGVFFSAAALMAVIALIMAIALPRRVPSHQATYAALIGSVFALARRHAVLRQRSLYQGLLFASFSLF
WTLAPIELMRHHGFSQAQVAIFALVGAVGAVAAPIAGRLADAGHGRRGTLVALLLAPASLLIAALPGSSYVWLVVCAVLL
DFAVQLNMVLGQREVYAIDPHSRARLNAVYMTSIFVGGALGSLVASPLYEHFGWNLSAVTVALLPALALALFLSRKADA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=391, Percent_Identity=24.8081841432225, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41720; Mature: 41720

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGNPAAAAKAEPSASLSGLMVAFLAFCCGAVVANLYYAQPIVELIAPQIGLSSANASL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
IVSLTQFGYALGLLLLVPLADLMENRRLVVGFTLAASVTLLCAGLTHSPSMFLVLSLLIG
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LTSVAVQILVPLAAHLAPEATRGRVVGNIMSGLLLGILLSRPLSSLLVEVFGWRGVFFSA
HHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
AALMAVIALIMAIALPRRVPSHQATYAALIGSVFALARRHAVLRQRSLYQGLLFASFSLF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTLAPIELMRHHGFSQAQVAIFALVGAVGAVAAPIAGRLADAGHGRRGTLVALLLAPASL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LIAALPGSSYVWLVVCAVLLDFAVQLNMVLGQREVYAIDPHSRARLNAVYMTSIFVGGAL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
GSLVASPLYEHFGWNLSAVTVALLPALALALFLSRKADA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTGNPAAAAKAEPSASLSGLMVAFLAFCCGAVVANLYYAQPIVELIAPQIGLSSANASL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
IVSLTQFGYALGLLLLVPLADLMENRRLVVGFTLAASVTLLCAGLTHSPSMFLVLSLLIG
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LTSVAVQILVPLAAHLAPEATRGRVVGNIMSGLLLGILLSRPLSSLLVEVFGWRGVFFSA
HHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
AALMAVIALIMAIALPRRVPSHQATYAALIGSVFALARRHAVLRQRSLYQGLLFASFSLF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTLAPIELMRHHGFSQAQVAIFALVGAVGAVAAPIAGRLADAGHGRRGTLVALLLAPASL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LIAALPGSSYVWLVVCAVLLDFAVQLNMVLGQREVYAIDPHSRARLNAVYMTSIFVGGAL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
GSLVASPLYEHFGWNLSAVTVALLPALALALFLSRKADA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]