| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458669
Identifier: 77458669
GI number: 77458669
Start: 2796313
End: 2796738
Strand: Direct
Name: 77458669
Synonym: Pfl01_2444
Alternate gene names: NA
Gene position: 2796313-2796738 (Clockwise)
Preceding gene: 77458668
Following gene: 77458674
Centisome position: 43.43
GC content: 63.85
Gene sequence:
>426_bases ATGCGCCGCACACTTCTGATGACCGCTGCCGCCGTACTCGTTTCGCTGACCGGCCTCGCCCACGCGGCTGACACCCCATC TGCCGCCCCGGCGAAGAGCTGGCAGCAGGGCCTGAGCCGCACTGATCTGGTTCGTCAGGATCTGGGTGCGGCGGATCGCG AGGTGATCCAGGCTCGCGTCGATTTCGAACCAGGCGTCACCTCGCCCAACCATGCGCATCCGGGTGTGGAAGTGGCTTAC GTGATCAGCGGCACGTTCGAATACCGGCTCGAAGGGCAGGCACCGGTGACGCTCAAGGCGGGGGATTCGCTGTTCATCCC GGCGGGTGTGGCGCATATCGCTAGGAACGTCGGCAACGAGAAGGGCTCGGAACTGGCGACCTACATCGTCAAGAAGGGCG AGCCGTTGCTGATTCTCAAGCAGTAA
Upstream 100 bases:
>100_bases ACACAAACGGGTAACAAACCCCGTCATCAGGACACATCCTGCGTACATGCCTCGGCCAAAGTAGTCGTCAACACATCACT ACTTCCAAGAGGACAACACC
Downstream 100 bases:
>100_bases CGTTCCGCGAAAACGAAGAAGGCCTGCCGATGTGGCAGGCCTTTTTGCGTCCGCTGTTCAGCGTATCAGTGGGCGTAAAC CGGGTAGTCGGTATAGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel; Cupin 2 Barrel
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRRTLLMTAAAVLVSLTGLAHAADTPSAAPAKSWQQGLSRTDLVRQDLGAADREVIQARVDFEPGVTSPNHAHPGVEVAY VISGTFEYRLEGQAPVTLKAGDSLFIPAGVAHIARNVGNEKGSELATYIVKKGEPLLILKQ
Sequences:
>Translated_141_residues MRRTLLMTAAAVLVSLTGLAHAADTPSAAPAKSWQQGLSRTDLVRQDLGAADREVIQARVDFEPGVTSPNHAHPGVEVAY VISGTFEYRLEGQAPVTLKAGDSLFIPAGVAHIARNVGNEKGSELATYIVKKGEPLLILKQ >Mature_141_residues MRRTLLMTAAAVLVSLTGLAHAADTPSAAPAKSWQQGLSRTDLVRQDLGAADREVIQARVDFEPGVTSPNHAHPGVEVAY VISGTFEYRLEGQAPVTLKAGDSLFIPAGVAHIARNVGNEKGSELATYIVKKGEPLLILKQ
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14954; Mature: 14954
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTLLMTAAAVLVSLTGLAHAADTPSAAPAKSWQQGLSRTDLVRQDLGAADREVIQARV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHC DFEPGVTSPNHAHPGVEVAYVISGTFEYRLEGQAPVTLKAGDSLFIPAGVAHIARNVGNE CCCCCCCCCCCCCCCCEEEEEEECEEEEEECCCCCEEEECCCCEEECHHHHHHHHHCCCC KGSELATYIVKKGEPLLILKQ CCHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MRRTLLMTAAAVLVSLTGLAHAADTPSAAPAKSWQQGLSRTDLVRQDLGAADREVIQARV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHC DFEPGVTSPNHAHPGVEVAYVISGTFEYRLEGQAPVTLKAGDSLFIPAGVAHIARNVGNE CCCCCCCCCCCCCCCCEEEEEEECEEEEEECCCCCEEEECCCCEEECHHHHHHHHHCCCC KGSELATYIVKKGEPLLILKQ CCHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA