| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457643
Identifier: 77457643
GI number: 77457643
Start: 1586558
End: 1587421
Strand: Direct
Name: 77457643
Synonym: Pfl01_1416
Alternate gene names: NA
Gene position: 1586558-1587421 (Clockwise)
Preceding gene: 77457641
Following gene: 77457646
Centisome position: 24.64
GC content: 60.76
Gene sequence:
>864_bases ATGTTTGTCCTTTCGAAAAAGTCCGCGCTCGCGGCGGCGTCCACGAGCCTGTTCGTTCTGCTGTGGAGCAGCGGGGCGAT CTTTTCCAAGTGGGGGCTGGCCCACGCTTCGCCCTTTGCCTTTTTGCTGATCCGTTTTGTCATTGCCCTGTGCGGGCTGG TGCTGCTGGTGCCGTTGCTCAAGCTGAAACTGCCCAAGGGCGGCAAGCCGATGCTGTACGCGATGGCCACCGGCGTGGTG CTGTTGGGGGCTTATCAGATCTTCTATCTGCTGGCGCTGGATCTGAAAGTCACGCCCGGGGTGATGGCGACCATCATGGG CGTGCAGCCGATCCTCACGGTGGTGATCATGGAGCGGCAGCGCTCGGCGAGCCGGATCTTTGGTCTGGCGTTGGGATTGG CCGGTCTGATCATGGTGGTTTATCAGGGTATCGGTCTGGCCGGCATGTCGCTGGCGGGGATGTTGTTCGGGCTGCTGGCG CTGGCGAGCATGACCTTTGGCTCGATCATGCAGAAACGCATCACCGACAATCCCCTCGGCACGCTGCCGGTGCAGTACCT GGCCGGTCTGCTGCTGTGCGGGATTTTCGTGCCATTCCAGCCGTTCCACTTCGAGCATAGCGCCGGTTTCATCGTGCCGG CGCTGTGGATGGGGCTGGTGGTTTCCGTACTGGCGACGTTGCTGCTGTATCGACTGATTGCCCGGGGCAATCTGGTGAAT GTCACCAGTCTGTTCTATCTGGTGCCGGCCGTGACGGCGGTGATGGACTACCTGATCTTCGGCAATCGCCTGGCGGCGTT GAGCGTGCTGGGGATGCTGTTGATCATCGTCGGTCTGGTGTTCGTGTTCCGTAAATCGGCGTAA
Upstream 100 bases:
>100_bases CTGATCAGCGATTCCTGCTGACCCCTGTGCCCGCCTGAAAAAACCTACTGAATTTCAGCTTCGGCTGAGTTGGCTATTTG CCTGACTACAGGTGGTATTC
Downstream 100 bases:
>100_bases CCGCCGCGCATGAAAAGGCCCGGGAGGAAACTCCCGGGCCTTCGTGCATCTGCAAATCAGCGAGTGGCGATTTCTGCCGG TTTCACCGCCGCCGGTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MFVLSKKSALAAASTSLFVLLWSSGAIFSKWGLAHASPFAFLLIRFVIALCGLVLLVPLLKLKLPKGGKPMLYAMATGVV LLGAYQIFYLLALDLKVTPGVMATIMGVQPILTVVIMERQRSASRIFGLALGLAGLIMVVYQGIGLAGMSLAGMLFGLLA LASMTFGSIMQKRITDNPLGTLPVQYLAGLLLCGIFVPFQPFHFEHSAGFIVPALWMGLVVSVLATLLLYRLIARGNLVN VTSLFYLVPAVTAVMDYLIFGNRLAALSVLGMLLIIVGLVFVFRKSA
Sequences:
>Translated_287_residues MFVLSKKSALAAASTSLFVLLWSSGAIFSKWGLAHASPFAFLLIRFVIALCGLVLLVPLLKLKLPKGGKPMLYAMATGVV LLGAYQIFYLLALDLKVTPGVMATIMGVQPILTVVIMERQRSASRIFGLALGLAGLIMVVYQGIGLAGMSLAGMLFGLLA LASMTFGSIMQKRITDNPLGTLPVQYLAGLLLCGIFVPFQPFHFEHSAGFIVPALWMGLVVSVLATLLLYRLIARGNLVN VTSLFYLVPAVTAVMDYLIFGNRLAALSVLGMLLIIVGLVFVFRKSA >Mature_287_residues MFVLSKKSALAAASTSLFVLLWSSGAIFSKWGLAHASPFAFLLIRFVIALCGLVLLVPLLKLKLPKGGKPMLYAMATGVV LLGAYQIFYLLALDLKVTPGVMATIMGVQPILTVVIMERQRSASRIFGLALGLAGLIMVVYQGIGLAGMSLAGMLFGLLA LASMTFGSIMQKRITDNPLGTLPVQYLAGLLLCGIFVPFQPFHFEHSAGFIVPALWMGLVVSVLATLLLYRLIARGNLVN VTSLFYLVPAVTAVMDYLIFGNRLAALSVLGMLLIIVGLVFVFRKSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30728; Mature: 30728
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVLSKKSALAAASTSLFVLLWSSGAIFSKWGLAHASPFAFLLIRFVIALCGLVLLVPLL CCEECCHHHHHHHHHHHEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KLKLPKGGKPMLYAMATGVVLLGAYQIFYLLALDLKVTPGVMATIMGVQPILTVVIMERQ HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RSASRIFGLALGLAGLIMVVYQGIGLAGMSLAGMLFGLLALASMTFGSIMQKRITDNPLG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TLPVQYLAGLLLCGIFVPFQPFHFEHSAGFIVPALWMGLVVSVLATLLLYRLIARGNLVN CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VTSLFYLVPAVTAVMDYLIFGNRLAALSVLGMLLIIVGLVFVFRKSA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFVLSKKSALAAASTSLFVLLWSSGAIFSKWGLAHASPFAFLLIRFVIALCGLVLLVPLL CCEECCHHHHHHHHHHHEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KLKLPKGGKPMLYAMATGVVLLGAYQIFYLLALDLKVTPGVMATIMGVQPILTVVIMERQ HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RSASRIFGLALGLAGLIMVVYQGIGLAGMSLAGMLFGLLALASMTFGSIMQKRITDNPLG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TLPVQYLAGLLLCGIFVPFQPFHFEHSAGFIVPALWMGLVVSVLATLLLYRLIARGNLVN CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VTSLFYLVPAVTAVMDYLIFGNRLAALSVLGMLLIIVGLVFVFRKSA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA