| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is aceK [H]
Identifier: 77457646
GI number: 77457646
Start: 1590514
End: 1592235
Strand: Direct
Name: aceK [H]
Synonym: Pfl01_1419
Alternate gene names: 77457646
Gene position: 1590514-1592235 (Clockwise)
Preceding gene: 77457643
Following gene: 77457647
Centisome position: 24.7
GC content: 60.63
Gene sequence:
>1722_bases ATGCCGCAGCAATGGCCAGCCACCGACATCGCCCGCCTGATCCTCGATGGGTTTGACGATTACCGCGAGCATTTCCGGCG GATCACCGACGGCGCCCGGGAGCGCTTCGAGCAGGCCCGCTGGCAGGACACGCAAACCGCGTCGGCGGCGCGGATCAACC TCTACGAAGAAAAGGTCGGTGAAACCGTCGCCCGTCTGCGCGAGTACTTCGAGCCGGACACCTTGATGGATGTCACCTGC TGGCCACTGGTGAAAAGCGCCTACATCAGCATCATCGACCTGCGCTTCGACGATGAGCTGTCCGAGACCTGGTACAACTC GATTTTCTGCAGCCTGTTCAGCCACGACCTGATCAGCGACGGCTGCATGTTCATCCACACCACGCGCCCGAGCCTGCGTC GGGCACGGGCCGCGCAAACCCGCACCTACAAGCCCCAAGGGCAGATCTCGGGCATGCTTGCGAGCATCTTTGCCGATTAC CGCTTCAGCGAGGCCTACGCCGATTTGCCCGGCGACTTGCTGCGTCTGGAAGCGCAACTGCGCGAGAACCTGCCGGACTG GGTGTGCAAGGACCCGGAGCTGAGCGTCGAGCTGTTTTCCTCGGTGCTGTACCGCAACAAGGGCGCGTACCTGGTGGGGC GCATCTACACCAACGACGATCAGTGGCCGTTGGTGATTCCGTTGCTGCACCGCGAAGGGCGCGGGATTCAGATCGACGCA TTGATCACCGACGAAGCGGAGGTGTCGATCATCTTCTCCTTCACCCGTTCGTATTTCATGGTGGATGTGCCGGTGCCGGC GGAGTTCATCGGTTTCCTCAAACGCATCCTGCCGGGCAAGCACATCGCCGAGCTGTACACCTCGATCGGTTTCTACAAGC ACGGTAAATCGGAGTTCTACCGCGCCCTGATCAATCACCTGGCCAACACCGATGACCAGTTCATCATGGCGCCGGGCGTG CGCGGCATGGTCATGAGCGTGTTCACGCTGCCGGGCTTCAACACCGTGTTCAAGATCATCAAGGACCGTTTCTCCCCATC CAAAAACGTCGACCGCGCCACGGTGATCGAGAAGTACCGACTGGTGAAAAGCGTCGACCGCGTCGGGCGCATGGCCGATA CCCAGGAATTCGCCGACTTTCGTTTTCCCCTGAGCAAATTCGAGCCGGCGTGCCTGGCGGAGCTGCTGGAAGTCGCGCCG TCCACGGTGTCGCTGGAAGGCGAAACCGTGCTGATCCGCCACTGCTGGACCGAGCGCCGGATGACCCCGCTCAACCTGTA TCTGGATAACGCCAACGAAGCCCAGGTGCGCGAAGCGCTGGAGGATTACGGCCTGGCGATCAAGCAACTGGCGGCGGCCA ACATCTTTCCCGGCGACATGCTGCTGAAGAACTTCGGCGTCACCCGCCATGGCCGGGTGGTGTTCTACGACTACGACGAG ATCTGCTTTCTCACCGAAGCCAACTTCCGCCACATTCCGGCACCGCGTACGCCGGAGGACGAAATGGCCTCCGAACCGTG GTATTCGATCGGGCCACTGGATGTGTTTCCCGAGGAATTTCCGCCGTTCCTGTTTGCCGATGCAGCGCAGCGCAAGCTGT TCGATCAGTTGCATGGCGAGTTGTACAACGCTGATTACTGGAAGGGGCTACAGGAAGCGATTCGGGCGGGGAAAGTCATT GATGTCTTTCCGTATCGGCGCAAAGGCCTGGATAACGAATAA
Upstream 100 bases:
>100_bases AAGAGGATTTGGCCGAAATTGCGCTTCTCCTGCAGCCGCTTCCGTGGCTAAGCTCAGGCCTTCGAGCACAGATTCTCCAA TTCCCGCAGAGGTCTCATCT
Downstream 100 bases:
>100_bases AGCAGCCGCAAGCCGCAAGCCGCAAGCAGCAAGCAGCAAGCTACAAGCAGCAAGCTACAAGCCTCAAGTCAAACGCCGCT TTCAACTTGCGGCTTGTAGC
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P [H]
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MPQQWPATDIARLILDGFDDYREHFRRITDGARERFEQARWQDTQTASAARINLYEEKVGETVARLREYFEPDTLMDVTC WPLVKSAYISIIDLRFDDELSETWYNSIFCSLFSHDLISDGCMFIHTTRPSLRRARAAQTRTYKPQGQISGMLASIFADY RFSEAYADLPGDLLRLEAQLRENLPDWVCKDPELSVELFSSVLYRNKGAYLVGRIYTNDDQWPLVIPLLHREGRGIQIDA LITDEAEVSIIFSFTRSYFMVDVPVPAEFIGFLKRILPGKHIAELYTSIGFYKHGKSEFYRALINHLANTDDQFIMAPGV RGMVMSVFTLPGFNTVFKIIKDRFSPSKNVDRATVIEKYRLVKSVDRVGRMADTQEFADFRFPLSKFEPACLAELLEVAP STVSLEGETVLIRHCWTERRMTPLNLYLDNANEAQVREALEDYGLAIKQLAAANIFPGDMLLKNFGVTRHGRVVFYDYDE ICFLTEANFRHIPAPRTPEDEMASEPWYSIGPLDVFPEEFPPFLFADAAQRKLFDQLHGELYNADYWKGLQEAIRAGKVI DVFPYRRKGLDNE
Sequences:
>Translated_573_residues MPQQWPATDIARLILDGFDDYREHFRRITDGARERFEQARWQDTQTASAARINLYEEKVGETVARLREYFEPDTLMDVTC WPLVKSAYISIIDLRFDDELSETWYNSIFCSLFSHDLISDGCMFIHTTRPSLRRARAAQTRTYKPQGQISGMLASIFADY RFSEAYADLPGDLLRLEAQLRENLPDWVCKDPELSVELFSSVLYRNKGAYLVGRIYTNDDQWPLVIPLLHREGRGIQIDA LITDEAEVSIIFSFTRSYFMVDVPVPAEFIGFLKRILPGKHIAELYTSIGFYKHGKSEFYRALINHLANTDDQFIMAPGV RGMVMSVFTLPGFNTVFKIIKDRFSPSKNVDRATVIEKYRLVKSVDRVGRMADTQEFADFRFPLSKFEPACLAELLEVAP STVSLEGETVLIRHCWTERRMTPLNLYLDNANEAQVREALEDYGLAIKQLAAANIFPGDMLLKNFGVTRHGRVVFYDYDE ICFLTEANFRHIPAPRTPEDEMASEPWYSIGPLDVFPEEFPPFLFADAAQRKLFDQLHGELYNADYWKGLQEAIRAGKVI DVFPYRRKGLDNE >Mature_572_residues PQQWPATDIARLILDGFDDYREHFRRITDGARERFEQARWQDTQTASAARINLYEEKVGETVARLREYFEPDTLMDVTCW PLVKSAYISIIDLRFDDELSETWYNSIFCSLFSHDLISDGCMFIHTTRPSLRRARAAQTRTYKPQGQISGMLASIFADYR FSEAYADLPGDLLRLEAQLRENLPDWVCKDPELSVELFSSVLYRNKGAYLVGRIYTNDDQWPLVIPLLHREGRGIQIDAL ITDEAEVSIIFSFTRSYFMVDVPVPAEFIGFLKRILPGKHIAELYTSIGFYKHGKSEFYRALINHLANTDDQFIMAPGVR GMVMSVFTLPGFNTVFKIIKDRFSPSKNVDRATVIEKYRLVKSVDRVGRMADTQEFADFRFPLSKFEPACLAELLEVAPS TVSLEGETVLIRHCWTERRMTPLNLYLDNANEAQVREALEDYGLAIKQLAAANIFPGDMLLKNFGVTRHGRVVFYDYDEI CFLTEANFRHIPAPRTPEDEMASEPWYSIGPLDVFPEEFPPFLFADAAQRKLFDQLHGELYNADYWKGLQEAIRAGKVID VFPYRRKGLDNE
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family [H]
Homologues:
Organism=Escherichia coli, GI1790446, Length=562, Percent_Identity=46.085409252669, Blast_Score=489, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010452 - ProDom: PD043552 [H]
Pfam domain/function: PF06315 AceK [H]
EC number: =2.7.11.5 [H]
Molecular weight: Translated: 66063; Mature: 65932
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQQWPATDIARLILDGFDDYREHFRRITDGARERFEQARWQDTQTASAARINLYEEKVG CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH ETVARLREYFEPDTLMDVTCWPLVKSAYISIIDLRFDDELSETWYNSIFCSLFSHDLISD HHHHHHHHHCCCCCEECCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC GCMFIHTTRPSLRRARAAQTRTYKPQGQISGMLASIFADYRFSEAYADLPGDLLRLEAQL CEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RENLPDWVCKDPELSVELFSSVLYRNKGAYLVGRIYTNDDQWPLVIPLLHREGRGIQIDA HHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEE LITDEAEVSIIFSFTRSYFMVDVPVPAEFIGFLKRILPGKHIAELYTSIGFYKHGKSEFY EEECCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH RALINHLANTDDQFIMAPGVRGMVMSVFTLPGFNTVFKIIKDRFSPSKNVDRATVIEKYR HHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH LVKSVDRVGRMADTQEFADFRFPLSKFEPACLAELLEVAPSTVSLEGETVLIRHCWTERR HHHHHHHHHHHHCHHHHHHHCCCHHHCCHHHHHHHHHHCCCCEEECCCEEEEEEHHHCCC MTPLNLYLDNANEAQVREALEDYGLAIKQLAAANIFPGDMLLKNFGVTRHGRVVFYDYDE CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCC ICFLTEANFRHIPAPRTPEDEMASEPWYSIGPLDVFPEEFPPFLFADAAQRKLFDQLHGE EEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LYNADYWKGLQEAIRAGKVIDVFPYRRKGLDNE HCCCHHHHHHHHHHHCCCEEEECCCHHCCCCCC >Mature Secondary Structure PQQWPATDIARLILDGFDDYREHFRRITDGARERFEQARWQDTQTASAARINLYEEKVG CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH ETVARLREYFEPDTLMDVTCWPLVKSAYISIIDLRFDDELSETWYNSIFCSLFSHDLISD HHHHHHHHHCCCCCEECCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC GCMFIHTTRPSLRRARAAQTRTYKPQGQISGMLASIFADYRFSEAYADLPGDLLRLEAQL CEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RENLPDWVCKDPELSVELFSSVLYRNKGAYLVGRIYTNDDQWPLVIPLLHREGRGIQIDA HHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEE LITDEAEVSIIFSFTRSYFMVDVPVPAEFIGFLKRILPGKHIAELYTSIGFYKHGKSEFY EEECCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH RALINHLANTDDQFIMAPGVRGMVMSVFTLPGFNTVFKIIKDRFSPSKNVDRATVIEKYR HHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH LVKSVDRVGRMADTQEFADFRFPLSKFEPACLAELLEVAPSTVSLEGETVLIRHCWTERR HHHHHHHHHHHHCHHHHHHHCCCHHHCCHHHHHHHHHHCCCCEEECCCEEEEEEHHHCCC MTPLNLYLDNANEAQVREALEDYGLAIKQLAAANIFPGDMLLKNFGVTRHGRVVFYDYDE CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCC ICFLTEANFRHIPAPRTPEDEMASEPWYSIGPLDVFPEEFPPFLFADAAQRKLFDQLHGE EEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LYNADYWKGLQEAIRAGKVIDVFPYRRKGLDNE HCCCHHHHHHHHHHHCCCEEEECCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA