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The map label for this gene is ybgL [C]

Identifier: 77457632

GI number: 77457632

Start: 1576642

End: 1577394

Strand: Direct

Name: ybgL [C]

Synonym: Pfl01_1405

Alternate gene names: 77457632

Gene position: 1576642-1577394 (Clockwise)

Preceding gene: 77457631

Following gene: 77457633

Centisome position: 24.49

GC content: 64.01

Gene sequence:

>753_bases
ATGAGCCGCCTGCTATTGAACTGTGACATCGGCGAGAGCTTCGGCAGCTGGACCATGGGTCTGGACGCGGAAGTCATGCC
CTTCATCGACTGCGCCAACATTGCCTGCGGTTTCCACGCCGGCGACCCGAGCATCATGCGCAAGACCGTCAGCCTGGCGT
TGAGCCACGGCGTGAAGATCGGCGCGCATCCGGCCTATCAGGATCTGGTGGGGTTCGGCCGACGTTCCATGGCCTACACG
GCCCAGGAACTGCAGGACATCCTGCATTACCAGATCGGCGCTCTCGACGGCATTTGCCGTGCCCAGGGTGGCAAAGTCAG
TTACGTCAAACCCCACGGCGCGATGTACAACGACATGATGGCCAACCCGGCGCAGTTGCGCGCGGTGATTCAGGCCGTCG
TGGCTTACGATCGCAGCTTGCCGTTGATGCTGATGGCCACCCGCGACAACACGGCAGCCCAGCAACTCGGCGACGAATAC
GGCGTGACGCTGTGGTTCGAAGCCTTCGCCGACCGCGCCTACGACAGCGCCGGCCGACTGGTCTCGCGACAACTGCCGGG
CGCGGTGCACCACGATTGCGAAACCATCATCGGGCAAGCGCTGACCATCGCCCGTGGCGACAACCTCACCGCCAGCGACG
GCAGCGCGCTGCACCTGCAAGCCAACACTTTGTGCGTGCACGGTGACAACGCCAGCTCAGTGGCGGCCGTGCAGCGCATT
CGTCAGGCCTTGAACGAGCAGAGCGCGCCATGA

Upstream 100 bases:

>100_bases
CCTGCCGGAAACCCGTGGCAAGCAACTGGACGCGCAGTAACTGATAACCTGCGACAACGCCCTACGATAAAAAAAGACAA
AAGCTACAGGAGTGTTCACC

Downstream 100 bases:

>100_bases
ATCCGCGGGTGGAAGTGGTGGCGCTGGATTGCCTGATGCTGCGCTTGTTCGATGAAATCGCCGAAGCCAACATGCCGTGG
ATGCTCGCCGCCAGCGAGCG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSRLLLNCDIGESFGSWTMGLDAEVMPFIDCANIACGFHAGDPSIMRKTVSLALSHGVKIGAHPAYQDLVGFGRRSMAYT
AQELQDILHYQIGALDGICRAQGGKVSYVKPHGAMYNDMMANPAQLRAVIQAVVAYDRSLPLMLMATRDNTAAQQLGDEY
GVTLWFEAFADRAYDSAGRLVSRQLPGAVHHDCETIIGQALTIARGDNLTASDGSALHLQANTLCVHGDNASSVAAVQRI
RQALNEQSAP

Sequences:

>Translated_250_residues
MSRLLLNCDIGESFGSWTMGLDAEVMPFIDCANIACGFHAGDPSIMRKTVSLALSHGVKIGAHPAYQDLVGFGRRSMAYT
AQELQDILHYQIGALDGICRAQGGKVSYVKPHGAMYNDMMANPAQLRAVIQAVVAYDRSLPLMLMATRDNTAAQQLGDEY
GVTLWFEAFADRAYDSAGRLVSRQLPGAVHHDCETIIGQALTIARGDNLTASDGSALHLQANTLCVHGDNASSVAAVQRI
RQALNEQSAP
>Mature_249_residues
SRLLLNCDIGESFGSWTMGLDAEVMPFIDCANIACGFHAGDPSIMRKTVSLALSHGVKIGAHPAYQDLVGFGRRSMAYTA
QELQDILHYQIGALDGICRAQGGKVSYVKPHGAMYNDMMANPAQLRAVIQAVVAYDRSLPLMLMATRDNTAAQQLGDEYG
VTLWFEAFADRAYDSAGRLVSRQLPGAVHHDCETIIGQALTIARGDNLTASDGSALHLQANTLCVHGDNASSVAAVQRIR
QALNEQSAP

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=246, Percent_Identity=40.2439024390244, Blast_Score=162, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1405_PSEPF (Q3KGF8)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_347137.1
- ProteinModelPortal:   Q3KGF8
- SMR:   Q3KGF8
- STRING:   Q3KGF8
- GeneID:   3717200
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_1405
- eggNOG:   COG1540
- HOGENOM:   HBG482818
- OMA:   GRRSMAC
- ProtClustDB:   PRK05406
- BioCyc:   PFLU205922:PFL_1405-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26851; Mature: 26720

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLLNCDIGESFGSWTMGLDAEVMPFIDCANIACGFHAGDPSIMRKTVSLALSHGVKI
CCCEEEECCCCCCCCCEEECCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCEE
GAHPAYQDLVGFGRRSMAYTAQELQDILHYQIGALDGICRAQGGKVSYVKPHGAMYNDMM
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
ANPAQLRAVIQAVVAYDRSLPLMLMATRDNTAAQQLGDEYGVTLWFEAFADRAYDSAGRL
CCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCHHCCEEEEHHHHHHHHHHHHHHH
VSRQLPGAVHHDCETIIGQALTIARGDNLTASDGSALHLQANTLCVHGDNASSVAAVQRI
HHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEECEEEEECCCCHHHHHHHHH
RQALNEQSAP
HHHHHHCCCC
>Mature Secondary Structure 
SRLLLNCDIGESFGSWTMGLDAEVMPFIDCANIACGFHAGDPSIMRKTVSLALSHGVKI
CCEEEECCCCCCCCCEEECCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCEE
GAHPAYQDLVGFGRRSMAYTAQELQDILHYQIGALDGICRAQGGKVSYVKPHGAMYNDMM
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
ANPAQLRAVIQAVVAYDRSLPLMLMATRDNTAAQQLGDEYGVTLWFEAFADRAYDSAGRL
CCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCHHCCEEEEHHHHHHHHHHHHHHH
VSRQLPGAVHHDCETIIGQALTIARGDNLTASDGSALHLQANTLCVHGDNASSVAAVQRI
HHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEECEEEEECCCCHHHHHHHHH
RQALNEQSAP
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA