| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is eptA [H]
Identifier: 77457614
GI number: 77457614
Start: 1560187
End: 1561836
Strand: Direct
Name: eptA [H]
Synonym: Pfl01_1387
Alternate gene names: 77457614
Gene position: 1560187-1561836 (Clockwise)
Preceding gene: 77457611
Following gene: 77457615
Centisome position: 24.23
GC content: 57.21
Gene sequence:
>1650_bases ATGCTCAAGTTAAAAGCCGTGCGCCCGGAATGGGTGACGTTGTTTGCCAGCGCCTTTCTTTTGGCCGGATTCAATTTCGT GCTATGGCAACACCTGTTCGACATTACTACCGCGGACGGCAAAGGCATTGCCATGCGCATTGCGTTCGGGGTGATGATCT TCGCGGCGTATAACATCGTGCTGACGTTGCTGGCGTTTCGACCCGTGTTGAAGCCGGTGTTGACGTTGTTGTTCATGGTC AGTGCCGGCGTGGCTTATTTCATGAGCCAATACGGGGTCATGATCGATGCCGGCATGTTTCGCAACTTTGCCGAAACCAA TGCCACGGAAGTTCGCGACCTGCTGTCTTTGAAGTTGCTCGCTTATATCTTTTTTCTGGGTGTCTTGCCGTCCTGGTTGT TGTGGAAAGTTCCAGTCAACTATCGTCGTTGGCATCGCGAGTTATTAAGTAAAGTTGTGGTGAGTGTCGCGTCGGTTGCA GTCATTGGCGGCGTGGCGCTGGCCAATTATCAAGGGCTGTCGTCGCTGTTTCGCAATCACCACGAAATTCGCTTGATGCT GGTGCCGAGCAACTACATCGGCGCCTCGGCCGGTTATCTGCGTGAGCAGGTGGCCTCGGTGCATCAACCGTTCGTCACAA TCGGCGAAGATGCCCAGCGCAACGCCGCCGTGCAGAACCATCCGCGCAAATCCCTGACGGTGCTGGTGGTGGGGGAGAGT GCCCGGGCGGAAAACTTCGGCATCCTTGGTTATGGCCGCGACACCACACCGAAACTGGACAAGGAAGCCGGCCTGATCGC TTTCACCGACGTGCATTCCTGCGGCACGGAAACCGCCGTGTCGGTGCCGTGCATGTTCTCCAACATGGGCCGCAAGAATT ACGACGCCAGCAAGGCAAAGAATGAGGAAGGGTTGCTGGACGTGCTTAAACGGGCCGGGATCGACGTGATCTGGCGCGAC AACCAGTCGGGCTGCAAAGGCACCTGCGATCGCGTCACCCTGCAGGATGTCAGCAATCTGAAAGACCCGGCGCTGTGCGC CAACAGCGAATGCCGCGACGAAATCCTGTTGCAGGGCCTGCAAAGCTTCATCGATCACCTGGACAAGGACACCGTGCTGG TCCTGCATCAGATGGGCAGCCACGGCCCGGAGTATTTCAAGCGTTATCCGAAGGAATACGAACACTTCACACCGGTGTGT GAGAGCAACGCACTGAACAATTGCAGCCGCGAGAGCATCGTCAACGGTTACGACAATACGCTGGTGTACACCGACCATGT GCTGTCGAGCCTGATCGATGTGCTGCGCAGCAATCAGGACAAGGTCGATACCGCCATGCTGTACCTGTCCGACCACGGCG AGTCGTTGGGTGAGTACAACCTGTTCCTCCACGGCACGCCGTACATGCTGGCGCCGGAGCAGCAGAAACACGTGGCGATG CTGGCCTGGTTCTCCGACAGCTATCAGAAGTCCTACTCGGTCGACACTCATTGCCTGCAAATGAGCCGCGACAAGCCATT GAGTCAGGACAACCTGTTTCACTCGATGCTCGGTCTGCTGGAAGTCCAGAGCAAGGTCTACCAGCCGGATCTGGACATGT TTGCCGGCTGCCGGGGCGCGGTGATCGACGGGGTGTTGGCCAAGGACTGA
Upstream 100 bases:
>100_bases CAAAAAATTGATGGTTGCGTGCTTAAAGTTTGTGCGGTCTGAGTCAATGAAATTTTCACAATTGACGACGGCACTTCTAT CAAGGAAATCGCCCCTCGCC
Downstream 100 bases:
>100_bases GCCGGCAGACTCACTCTGTAAGACTATTCTTTCCCACAGGCAGGAGATTTCATCAAGCTCTTGCCCTGTAGAGGCGCGGA AAGCGCCGGTGGCGATATAT
Product: phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MLKLKAVRPEWVTLFASAFLLAGFNFVLWQHLFDITTADGKGIAMRIAFGVMIFAAYNIVLTLLAFRPVLKPVLTLLFMV SAGVAYFMSQYGVMIDAGMFRNFAETNATEVRDLLSLKLLAYIFFLGVLPSWLLWKVPVNYRRWHRELLSKVVVSVASVA VIGGVALANYQGLSSLFRNHHEIRLMLVPSNYIGASAGYLREQVASVHQPFVTIGEDAQRNAAVQNHPRKSLTVLVVGES ARAENFGILGYGRDTTPKLDKEAGLIAFTDVHSCGTETAVSVPCMFSNMGRKNYDASKAKNEEGLLDVLKRAGIDVIWRD NQSGCKGTCDRVTLQDVSNLKDPALCANSECRDEILLQGLQSFIDHLDKDTVLVLHQMGSHGPEYFKRYPKEYEHFTPVC ESNALNNCSRESIVNGYDNTLVYTDHVLSSLIDVLRSNQDKVDTAMLYLSDHGESLGEYNLFLHGTPYMLAPEQQKHVAM LAWFSDSYQKSYSVDTHCLQMSRDKPLSQDNLFHSMLGLLEVQSKVYQPDLDMFAGCRGAVIDGVLAKD
Sequences:
>Translated_549_residues MLKLKAVRPEWVTLFASAFLLAGFNFVLWQHLFDITTADGKGIAMRIAFGVMIFAAYNIVLTLLAFRPVLKPVLTLLFMV SAGVAYFMSQYGVMIDAGMFRNFAETNATEVRDLLSLKLLAYIFFLGVLPSWLLWKVPVNYRRWHRELLSKVVVSVASVA VIGGVALANYQGLSSLFRNHHEIRLMLVPSNYIGASAGYLREQVASVHQPFVTIGEDAQRNAAVQNHPRKSLTVLVVGES ARAENFGILGYGRDTTPKLDKEAGLIAFTDVHSCGTETAVSVPCMFSNMGRKNYDASKAKNEEGLLDVLKRAGIDVIWRD NQSGCKGTCDRVTLQDVSNLKDPALCANSECRDEILLQGLQSFIDHLDKDTVLVLHQMGSHGPEYFKRYPKEYEHFTPVC ESNALNNCSRESIVNGYDNTLVYTDHVLSSLIDVLRSNQDKVDTAMLYLSDHGESLGEYNLFLHGTPYMLAPEQQKHVAM LAWFSDSYQKSYSVDTHCLQMSRDKPLSQDNLFHSMLGLLEVQSKVYQPDLDMFAGCRGAVIDGVLAKD >Mature_549_residues MLKLKAVRPEWVTLFASAFLLAGFNFVLWQHLFDITTADGKGIAMRIAFGVMIFAAYNIVLTLLAFRPVLKPVLTLLFMV SAGVAYFMSQYGVMIDAGMFRNFAETNATEVRDLLSLKLLAYIFFLGVLPSWLLWKVPVNYRRWHRELLSKVVVSVASVA VIGGVALANYQGLSSLFRNHHEIRLMLVPSNYIGASAGYLREQVASVHQPFVTIGEDAQRNAAVQNHPRKSLTVLVVGES ARAENFGILGYGRDTTPKLDKEAGLIAFTDVHSCGTETAVSVPCMFSNMGRKNYDASKAKNEEGLLDVLKRAGIDVIWRD NQSGCKGTCDRVTLQDVSNLKDPALCANSECRDEILLQGLQSFIDHLDKDTVLVLHQMGSHGPEYFKRYPKEYEHFTPVC ESNALNNCSRESIVNGYDNTLVYTDHVLSSLIDVLRSNQDKVDTAMLYLSDHGESLGEYNLFLHGTPYMLAPEQQKHVAM LAWFSDSYQKSYSVDTHCLQMSRDKPLSQDNLFHSMLGLLEVQSKVYQPDLDMFAGCRGAVIDGVLAKD
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=498, Percent_Identity=45.7831325301205, Blast_Score=446, Evalue=1e-126, Organism=Escherichia coli, GI87082286, Length=483, Percent_Identity=26.5010351966874, Blast_Score=162, Evalue=7e-41, Organism=Escherichia coli, GI87082223, Length=256, Percent_Identity=28.125, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1790392, Length=317, Percent_Identity=25.5520504731861, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787035, Length=238, Percent_Identity=28.1512605042017, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 61242; Mature: 61242
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLKAVRPEWVTLFASAFLLAGFNFVLWQHLFDITTADGKGIAMRIAFGVMIFAAYNIV CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHH LTLLAFRPVLKPVLTLLFMVSAGVAYFMSQYGVMIDAGMFRNFAETNATEVRDLLSLKLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCHHHHHHHHHHHHH AYIFFLGVLPSWLLWKVPVNYRRWHRELLSKVVVSVASVAVIGGVALANYQGLSSLFRNH HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HEIRLMLVPSNYIGASAGYLREQVASVHQPFVTIGEDAQRNAAVQNHPRKSLTVLVVGES CEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCHHHCCHHHCCCCCCEEEEEECCC ARAENFGILGYGRDTTPKLDKEAGLIAFTDVHSCGTETAVSVPCMFSNMGRKNYDASKAK CCCCCCEEEEECCCCCCCCCCCCCEEEEECCHHCCCCCCEECCHHHHHCCCCCCCCHHCC NEEGLLDVLKRAGIDVIWRDNQSGCKGTCDRVTLQDVSNLKDPALCANSECRDEILLQGL CCCHHHHHHHHCCCEEEEECCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHH QSFIDHLDKDTVLVLHQMGSHGPEYFKRYPKEYEHFTPVCESNALNNCSRESIVNGYDNT HHHHHHCCCCCEEEEHHHCCCCHHHHHHCCHHHHHHCCCHHCCCCCCCCHHHHHCCCCCC LVYTDHVLSSLIDVLRSNQDKVDTAMLYLSDHGESLGEYNLFLHGTPYMLAPEQQKHVAM EEEHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCEEEEEECCCCEECCCCCCCEEE LAWFSDSYQKSYSVDTHCLQMSRDKPLSQDNLFHSMLGLLEVQSKVYQPDLDMFAGCRGA EEEHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHH VIDGVLAKD HHCCHHCCC >Mature Secondary Structure MLKLKAVRPEWVTLFASAFLLAGFNFVLWQHLFDITTADGKGIAMRIAFGVMIFAAYNIV CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHH LTLLAFRPVLKPVLTLLFMVSAGVAYFMSQYGVMIDAGMFRNFAETNATEVRDLLSLKLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCHHHHHHHHHHHHH AYIFFLGVLPSWLLWKVPVNYRRWHRELLSKVVVSVASVAVIGGVALANYQGLSSLFRNH HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HEIRLMLVPSNYIGASAGYLREQVASVHQPFVTIGEDAQRNAAVQNHPRKSLTVLVVGES CEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCHHHCCHHHCCCCCCEEEEEECCC ARAENFGILGYGRDTTPKLDKEAGLIAFTDVHSCGTETAVSVPCMFSNMGRKNYDASKAK CCCCCCEEEEECCCCCCCCCCCCCEEEEECCHHCCCCCCEECCHHHHHCCCCCCCCHHCC NEEGLLDVLKRAGIDVIWRDNQSGCKGTCDRVTLQDVSNLKDPALCANSECRDEILLQGL CCCHHHHHHHHCCCEEEEECCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHH QSFIDHLDKDTVLVLHQMGSHGPEYFKRYPKEYEHFTPVCESNALNNCSRESIVNGYDNT HHHHHHCCCCCEEEEHHHCCCCHHHHHHCCHHHHHHCCCHHCCCCCCCCHHHHHCCCCCC LVYTDHVLSSLIDVLRSNQDKVDTAMLYLSDHGESLGEYNLFLHGTPYMLAPEQQKHVAM EEEHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCEEEEEECCCCEECCCCCCCEEE LAWFSDSYQKSYSVDTHCLQMSRDKPLSQDNLFHSMLGLLEVQSKVYQPDLDMFAGCRGA EEEHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHH VIDGVLAKD HHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 8282725 [H]