Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457553
Identifier: 77457553
GI number: 77457553
Start: 1499807
End: 1500892
Strand: Direct
Name: 77457553
Synonym: Pfl01_1326
Alternate gene names: NA
Gene position: 1499807-1500892 (Clockwise)
Preceding gene: 77457551
Following gene: 77457554
Centisome position: 23.29
GC content: 50.92
Gene sequence:
>1086_bases ATGGAATTCTTCGAAAAGTTAACCAGTCTTGCCGCCAAAGTTCGGTTGCAGAGCGCTGCAATCCAGACAGAAGAGGCGAC AAAAAACGCGTTTGTCATGCCCTTCATCAGTACTGTTCTGGGTTACGACGTATTCGACCCGACAGAGGTGACGCCGGAAT TTGTTTGCGATATCGGCACGAAGAAGGGCGAAAAAATCGATTACGCCATCATGAAAGAGGGCGAAGTGCAGATCCTCATC GAGTGCAAGAAAATCGGCGAGCCACTGCACATCAATCACGCCTCGCAGCTGTTTCGTTATTTCCACGTTACCAGTGCCCG AATCTCCATCCTCACCAACGGCCAGGTCTATAAGTTCTTCACTGATCTGGATGCGCCGAACAAGATGGATGAGAAGCCCT TCCTTGAACTGGATCTTCTGGATATCGATGAGTATTCGGTGCCAGAACTCATCAAGCTCACCAAGTCTGCGTTCGACGTT GATTCGATCATCAACGCGGCGGGTGAGTTGAAGTACGTCAGCCAGATCAAAAAGGTCATCGCCTCGCAGGTCAGCAAGCC GGATGACGATTTCGTCAAAGTGTTTGCTTCGCGAGTCTACGACGGGGTTATTACGCAGAAGGTGCGGGAACAGTTTCATG AACTGACGAGGAAAGCGGTCGTTCAATTTCTCAACGACCAGATCAATGACCGCCTCAAGTCAGCCATGAGTGGTGCGATC CAGCCGGCTCTGGCGTCTATTCCGGCCGCGTCTGGAGGGACGGATCCGGTGGATCCCCGTGACGAGTCCGACGATAAGGT TTTGACCACTCTGGAGGAACTGGAGGGGTATCACATTGTTCGTGCATTGGTTCGATCTGTGGTCGATGCCAAACGAATCG TTCAGCGCGATACACAGAGCTACTTTGGCATCCTGCTGGACGATAACAACCGAAAGCCGATTTGCCGCCTGCATTTCAAC CGTTCGCAGAAGTACATTGGCATTTTCGACGAGGAGAAAAACGAAACTCGCCATCCCATTAATTCCGTGGATGATATCTA CGAGTATTCAGATCAGTTGAAAAAGACCGTGGGCTATTACGACTAG
Upstream 100 bases:
>100_bases AAGTGGGAACTTTCTTTGTGTGGGTTTGCGTCTAGGATCAAATGGCAGTCAATTTGCCAGCATGCGAGTGCACGGATAGA AACCCAGTCAGAGGCCGCTC
Downstream 100 bases:
>100_bases TGTGGGATTTTCCAAAGAACCGGCCATCGGCCGGTTTTTTTAAGCAAGCGAAGTCCGCGAAAAAGGTGCTTGCCGCCGTC ACGTCTTAAGTCGGATAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MEFFEKLTSLAAKVRLQSAAIQTEEATKNAFVMPFISTVLGYDVFDPTEVTPEFVCDIGTKKGEKIDYAIMKEGEVQILI ECKKIGEPLHINHASQLFRYFHVTSARISILTNGQVYKFFTDLDAPNKMDEKPFLELDLLDIDEYSVPELIKLTKSAFDV DSIINAAGELKYVSQIKKVIASQVSKPDDDFVKVFASRVYDGVITQKVREQFHELTRKAVVQFLNDQINDRLKSAMSGAI QPALASIPAASGGTDPVDPRDESDDKVLTTLEELEGYHIVRALVRSVVDAKRIVQRDTQSYFGILLDDNNRKPICRLHFN RSQKYIGIFDEEKNETRHPINSVDDIYEYSDQLKKTVGYYD
Sequences:
>Translated_361_residues MEFFEKLTSLAAKVRLQSAAIQTEEATKNAFVMPFISTVLGYDVFDPTEVTPEFVCDIGTKKGEKIDYAIMKEGEVQILI ECKKIGEPLHINHASQLFRYFHVTSARISILTNGQVYKFFTDLDAPNKMDEKPFLELDLLDIDEYSVPELIKLTKSAFDV DSIINAAGELKYVSQIKKVIASQVSKPDDDFVKVFASRVYDGVITQKVREQFHELTRKAVVQFLNDQINDRLKSAMSGAI QPALASIPAASGGTDPVDPRDESDDKVLTTLEELEGYHIVRALVRSVVDAKRIVQRDTQSYFGILLDDNNRKPICRLHFN RSQKYIGIFDEEKNETRHPINSVDDIYEYSDQLKKTVGYYD >Mature_361_residues MEFFEKLTSLAAKVRLQSAAIQTEEATKNAFVMPFISTVLGYDVFDPTEVTPEFVCDIGTKKGEKIDYAIMKEGEVQILI ECKKIGEPLHINHASQLFRYFHVTSARISILTNGQVYKFFTDLDAPNKMDEKPFLELDLLDIDEYSVPELIKLTKSAFDV DSIINAAGELKYVSQIKKVIASQVSKPDDDFVKVFASRVYDGVITQKVREQFHELTRKAVVQFLNDQINDRLKSAMSGAI QPALASIPAASGGTDPVDPRDESDDKVLTTLEELEGYHIVRALVRSVVDAKRIVQRDTQSYFGILLDDNNRKPICRLHFN RSQKYIGIFDEEKNETRHPINSVDDIYEYSDQLKKTVGYYD
Specific function: Unknown
COG id: COG4748
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40969; Mature: 40969
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFFEKLTSLAAKVRLQSAAIQTEEATKNAFVMPFISTVLGYDVFDPTEVTPEFVCDIGT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCC KKGEKIDYAIMKEGEVQILIECKKIGEPLHINHASQLFRYFHVTSARISILTNGQVYKFF CCCCEEEEEEECCCCEEEEEEEHHCCCCEEECHHHHHHHHHHHHHHEEEEEECCEEEEEE TDLDAPNKMDEKPFLELDLLDIDEYSVPELIKLTKSAFDVDSIINAAGELKYVSQIKKVI ECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASQVSKPDDDFVKVFASRVYDGVITQKVREQFHELTRKAVVQFLNDQINDRLKSAMSGAI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QPALASIPAASGGTDPVDPRDESDDKVLTTLEELEGYHIVRALVRSVVDAKRIVQRDTQS HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YFGILLDDNNRKPICRLHFNRSQKYIGIFDEEKNETRHPINSVDDIYEYSDQLKKTVGYY HEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC D C >Mature Secondary Structure MEFFEKLTSLAAKVRLQSAAIQTEEATKNAFVMPFISTVLGYDVFDPTEVTPEFVCDIGT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCC KKGEKIDYAIMKEGEVQILIECKKIGEPLHINHASQLFRYFHVTSARISILTNGQVYKFF CCCCEEEEEEECCCCEEEEEEEHHCCCCEEECHHHHHHHHHHHHHHEEEEEECCEEEEEE TDLDAPNKMDEKPFLELDLLDIDEYSVPELIKLTKSAFDVDSIINAAGELKYVSQIKKVI ECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASQVSKPDDDFVKVFASRVYDGVITQKVREQFHELTRKAVVQFLNDQINDRLKSAMSGAI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QPALASIPAASGGTDPVDPRDESDDKVLTTLEELEGYHIVRALVRSVVDAKRIVQRDTQS HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YFGILLDDNNRKPICRLHFNRSQKYIGIFDEEKNETRHPINSVDDIYEYSDQLKKTVGYY HEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA