Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457546
Identifier: 77457546
GI number: 77457546
Start: 1494280
End: 1494966
Strand: Direct
Name: 77457546
Synonym: Pfl01_1319
Alternate gene names: NA
Gene position: 1494280-1494966 (Clockwise)
Preceding gene: 77457545
Following gene: 77457547
Centisome position: 23.21
GC content: 55.6
Gene sequence:
>687_bases ATGGCGGGGCAGGTGTTGGCTGATTGTGTGCCTGCGCCGGTGACGGGCGCGCGGGACTTTTCAGTGTGCAAGGCGTGGCC CGCTTATCCTGGCTTGACGCTCAAGGCTGTCGCTAAATTTTCGCCGGATCCGGTTTATGGCAAAACCGGGGATGTCGGCA GTTACGATCTTGCTCTCTCTGTTGGCTCGGTCGAGGGTCCGGAGCCTCTGGCCACCTATCACAAGCCTTCTGCATTCCAG TCCGATGCCTTCGCGCTGGACAGTGTGGAATTCGATACCGCGCGCTACAAATTGACCCCTGAAATTCGGGCCTTTGGTGT TCGGGTTGTCTTCAAAGGCTCCTCCCGCGTCAATCCCATGGATGAGACTTCGCTGTCCCTTTACGTGAAAGAGGGCAACA CGTTACGCCCCGTACTGGATCGGCTTGTGGTGTATGGCTACAACGGAGAGTGGGATGGAAATTGTGCGGGAGAACGCGCG AGCACCCTGCGCACGATCGAGATTGGAAAGACCAGTTCTCATGGTTACGCCGACTTGATCGTCAAATCGGTGACTACGGG TACTGTTGGCAAAGGCGATCCAGACACTTGTGATGAGAAAACCACAACCGCTAAACCTGTGCTGACGACCCTTCACTACG ACGGAAAATCCTACGTCTTGCCTAAAGGTTTCAAAGCCATCGAGTGA
Upstream 100 bases:
>100_bases GGATTGAGCAGGGGATAGTGCGCGGCTGACAAACATCAAGGAGCGGGGCGTGACAGTGAAGTCTGGGGTCGTTGGTTGGG TGGCGCTGTGTGGGGCGTTG
Downstream 100 bases:
>100_bases TACAGAACCAACGCGACTTAATTCAAGGAAGAACAATGTTTACCCCAACCCGACTTCTCATCGTCCTAGGCTTCCTGGCC GTAACCACTCAGGCCCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MAGQVLADCVPAPVTGARDFSVCKAWPAYPGLTLKAVAKFSPDPVYGKTGDVGSYDLALSVGSVEGPEPLATYHKPSAFQ SDAFALDSVEFDTARYKLTPEIRAFGVRVVFKGSSRVNPMDETSLSLYVKEGNTLRPVLDRLVVYGYNGEWDGNCAGERA STLRTIEIGKTSSHGYADLIVKSVTTGTVGKGDPDTCDEKTTTAKPVLTTLHYDGKSYVLPKGFKAIE
Sequences:
>Translated_228_residues MAGQVLADCVPAPVTGARDFSVCKAWPAYPGLTLKAVAKFSPDPVYGKTGDVGSYDLALSVGSVEGPEPLATYHKPSAFQ SDAFALDSVEFDTARYKLTPEIRAFGVRVVFKGSSRVNPMDETSLSLYVKEGNTLRPVLDRLVVYGYNGEWDGNCAGERA STLRTIEIGKTSSHGYADLIVKSVTTGTVGKGDPDTCDEKTTTAKPVLTTLHYDGKSYVLPKGFKAIE >Mature_227_residues AGQVLADCVPAPVTGARDFSVCKAWPAYPGLTLKAVAKFSPDPVYGKTGDVGSYDLALSVGSVEGPEPLATYHKPSAFQS DAFALDSVEFDTARYKLTPEIRAFGVRVVFKGSSRVNPMDETSLSLYVKEGNTLRPVLDRLVVYGYNGEWDGNCAGERAS TLRTIEIGKTSSHGYADLIVKSVTTGTVGKGDPDTCDEKTTTAKPVLTTLHYDGKSYVLPKGFKAIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24399; Mature: 24268
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQVLADCVPAPVTGARDFSVCKAWPAYPGLTLKAVAKFSPDPVYGKTGDVGSYDLALS CCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE VGSVEGPEPLATYHKPSAFQSDAFALDSVEFDTARYKLTPEIRAFGVRVVFKGSSRVNPM ECCCCCCCCCHHCCCCCCCCCCCEEECCEEECCEEEEECCCCEEEEEEEEEECCCCCCCC DETSLSLYVKEGNTLRPVLDRLVVYGYNGEWDGNCAGERASTLRTIEIGKTSSHGYADLI CCCEEEEEEECCCCHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHE VKSVTTGTVGKGDPDTCDEKTTTAKPVLTTLHYDGKSYVLPKGFKAIE EEHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCC >Mature Secondary Structure AGQVLADCVPAPVTGARDFSVCKAWPAYPGLTLKAVAKFSPDPVYGKTGDVGSYDLALS CCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE VGSVEGPEPLATYHKPSAFQSDAFALDSVEFDTARYKLTPEIRAFGVRVVFKGSSRVNPM ECCCCCCCCCHHCCCCCCCCCCCEEECCEEECCEEEEECCCCEEEEEEEEEECCCCCCCC DETSLSLYVKEGNTLRPVLDRLVVYGYNGEWDGNCAGERASTLRTIEIGKTSSHGYADLI CCCEEEEEEECCCCHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHE VKSVTTGTVGKGDPDTCDEKTTTAKPVLTTLHYDGKSYVLPKGFKAIE EEHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA