Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77457547

Identifier: 77457547

GI number: 77457547

Start: 1495002

End: 1495721

Strand: Direct

Name: 77457547

Synonym: Pfl01_1320

Alternate gene names: NA

Gene position: 1495002-1495721 (Clockwise)

Preceding gene: 77457546

Following gene: 77457548

Centisome position: 23.22

GC content: 55.97

Gene sequence:

>720_bases
ATGTTTACCCCAACCCGACTTCTCATCGTCCTAGGCTTCCTGGCCGTAACCACTCAGGCCCACGCCGCCTGTGAGATCAA
GAAATTCGACGGTCACTCCCTGTCACGCTGCAAAGTGTGGCCGGCCTTCCCGGAAAAGGCGATCTCGGCAAAATCTACCT
TCGTGTCCGACTCCGAAGGTGATCACGACGGCGTTTTCGATCTTGAGTTGTCGCTCCTCAACGCCTCGAATGCCAAGCCT
TTGGCGAATTACGTCAAGCCTGGAGCCTATAACTCCGACGCGATCCGCTTCGATGACTTGAAGATCGATACCGCGCGATA
CCGTCTGGCGTCGGACGTTCGTGCCTTTGGCCTGCGTTCGGATTTCGCCGACCGTCTCTCAAGAGCCAACCCCTACGCGA
AAACCGATCTGGCGCTGTATGTGCGCGAAGGCAGCAAGTTGCGACCGGTGCTGGAAGGTCTGGTCATTCGGAAAGAATTT
GGCGAGGGTAGCGGGGAGTGCGAAACCAAGGACACGAAAATCCTCAGGACAGTGGAAATCGGCTCGTCCAGCCATAACGG
GTTCGCTGATCTGATCGTCTCCTCAAGTGGTGTGGTGTACACCTCGACCCAGTCAGGCAAAGAGTGCGTTTCCAAAACCA
CCGACCTGAAGAAAACCCAAATCACCCTGACCTACGACGGCAAGCAATACCTCATCCCCGAAGACCTCAGAGGTTACTGA

Upstream 100 bases:

>100_bases
TGACGACCCTTCACTACGACGGAAAATCCTACGTCTTGCCTAAAGGTTTCAAAGCCATCGAGTGATACAGAACCAACGCG
ACTTAATTCAAGGAAGAACA

Downstream 100 bases:

>100_bases
CCCGATGCTCACCGGCCTCAACCACCTGACCCTCGCCGTCACCGACCTGGACAGCAGCCTCGCGTTCTACCGCGACGTGC
TGAAGCTGCGAGTCGAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MFTPTRLLIVLGFLAVTTQAHAACEIKKFDGHSLSRCKVWPAFPEKAISAKSTFVSDSEGDHDGVFDLELSLLNASNAKP
LANYVKPGAYNSDAIRFDDLKIDTARYRLASDVRAFGLRSDFADRLSRANPYAKTDLALYVREGSKLRPVLEGLVIRKEF
GEGSGECETKDTKILRTVEIGSSSHNGFADLIVSSSGVVYTSTQSGKECVSKTTDLKKTQITLTYDGKQYLIPEDLRGY

Sequences:

>Translated_239_residues
MFTPTRLLIVLGFLAVTTQAHAACEIKKFDGHSLSRCKVWPAFPEKAISAKSTFVSDSEGDHDGVFDLELSLLNASNAKP
LANYVKPGAYNSDAIRFDDLKIDTARYRLASDVRAFGLRSDFADRLSRANPYAKTDLALYVREGSKLRPVLEGLVIRKEF
GEGSGECETKDTKILRTVEIGSSSHNGFADLIVSSSGVVYTSTQSGKECVSKTTDLKKTQITLTYDGKQYLIPEDLRGY
>Mature_239_residues
MFTPTRLLIVLGFLAVTTQAHAACEIKKFDGHSLSRCKVWPAFPEKAISAKSTFVSDSEGDHDGVFDLELSLLNASNAKP
LANYVKPGAYNSDAIRFDDLKIDTARYRLASDVRAFGLRSDFADRLSRANPYAKTDLALYVREGSKLRPVLEGLVIRKEF
GEGSGECETKDTKILRTVEIGSSSHNGFADLIVSSSGVVYTSTQSGKECVSKTTDLKKTQITLTYDGKQYLIPEDLRGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26276; Mature: 26276

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTPTRLLIVLGFLAVTTQAHAACEIKKFDGHSLSRCKVWPAFPEKAISAKSTFVSDSEG
CCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCC
DHDGVFDLELSLLNASNAKPLANYVKPGAYNSDAIRFDDLKIDTARYRLASDVRAFGLRS
CCCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCEEECCEEECHHHHHHHHHHHHHCCHH
DFADRLSRANPYAKTDLALYVREGSKLRPVLEGLVIRKEFGEGSGECETKDTKILRTVEI
HHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
GSSSHNGFADLIVSSSGVVYTSTQSGKECVSKTTDLKKTQITLTYDGKQYLIPEDLRGY
CCCCCCCCEEEEECCCCEEEECCCCHHHHHHHCCCCCEEEEEEEECCCEEECCHHCCCC
>Mature Secondary Structure
MFTPTRLLIVLGFLAVTTQAHAACEIKKFDGHSLSRCKVWPAFPEKAISAKSTFVSDSEG
CCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCC
DHDGVFDLELSLLNASNAKPLANYVKPGAYNSDAIRFDDLKIDTARYRLASDVRAFGLRS
CCCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCEEECCEEECHHHHHHHHHHHHHCCHH
DFADRLSRANPYAKTDLALYVREGSKLRPVLEGLVIRKEFGEGSGECETKDTKILRTVEI
HHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
GSSSHNGFADLIVSSSGVVYTSTQSGKECVSKTTDLKKTQITLTYDGKQYLIPEDLRGY
CCCCCCCCEEEEECCCCEEEECCCCHHHHHHHCCCCCEEEEEEEECCCEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA