Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457547
Identifier: 77457547
GI number: 77457547
Start: 1495002
End: 1495721
Strand: Direct
Name: 77457547
Synonym: Pfl01_1320
Alternate gene names: NA
Gene position: 1495002-1495721 (Clockwise)
Preceding gene: 77457546
Following gene: 77457548
Centisome position: 23.22
GC content: 55.97
Gene sequence:
>720_bases ATGTTTACCCCAACCCGACTTCTCATCGTCCTAGGCTTCCTGGCCGTAACCACTCAGGCCCACGCCGCCTGTGAGATCAA GAAATTCGACGGTCACTCCCTGTCACGCTGCAAAGTGTGGCCGGCCTTCCCGGAAAAGGCGATCTCGGCAAAATCTACCT TCGTGTCCGACTCCGAAGGTGATCACGACGGCGTTTTCGATCTTGAGTTGTCGCTCCTCAACGCCTCGAATGCCAAGCCT TTGGCGAATTACGTCAAGCCTGGAGCCTATAACTCCGACGCGATCCGCTTCGATGACTTGAAGATCGATACCGCGCGATA CCGTCTGGCGTCGGACGTTCGTGCCTTTGGCCTGCGTTCGGATTTCGCCGACCGTCTCTCAAGAGCCAACCCCTACGCGA AAACCGATCTGGCGCTGTATGTGCGCGAAGGCAGCAAGTTGCGACCGGTGCTGGAAGGTCTGGTCATTCGGAAAGAATTT GGCGAGGGTAGCGGGGAGTGCGAAACCAAGGACACGAAAATCCTCAGGACAGTGGAAATCGGCTCGTCCAGCCATAACGG GTTCGCTGATCTGATCGTCTCCTCAAGTGGTGTGGTGTACACCTCGACCCAGTCAGGCAAAGAGTGCGTTTCCAAAACCA CCGACCTGAAGAAAACCCAAATCACCCTGACCTACGACGGCAAGCAATACCTCATCCCCGAAGACCTCAGAGGTTACTGA
Upstream 100 bases:
>100_bases TGACGACCCTTCACTACGACGGAAAATCCTACGTCTTGCCTAAAGGTTTCAAAGCCATCGAGTGATACAGAACCAACGCG ACTTAATTCAAGGAAGAACA
Downstream 100 bases:
>100_bases CCCGATGCTCACCGGCCTCAACCACCTGACCCTCGCCGTCACCGACCTGGACAGCAGCCTCGCGTTCTACCGCGACGTGC TGAAGCTGCGAGTCGAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MFTPTRLLIVLGFLAVTTQAHAACEIKKFDGHSLSRCKVWPAFPEKAISAKSTFVSDSEGDHDGVFDLELSLLNASNAKP LANYVKPGAYNSDAIRFDDLKIDTARYRLASDVRAFGLRSDFADRLSRANPYAKTDLALYVREGSKLRPVLEGLVIRKEF GEGSGECETKDTKILRTVEIGSSSHNGFADLIVSSSGVVYTSTQSGKECVSKTTDLKKTQITLTYDGKQYLIPEDLRGY
Sequences:
>Translated_239_residues MFTPTRLLIVLGFLAVTTQAHAACEIKKFDGHSLSRCKVWPAFPEKAISAKSTFVSDSEGDHDGVFDLELSLLNASNAKP LANYVKPGAYNSDAIRFDDLKIDTARYRLASDVRAFGLRSDFADRLSRANPYAKTDLALYVREGSKLRPVLEGLVIRKEF GEGSGECETKDTKILRTVEIGSSSHNGFADLIVSSSGVVYTSTQSGKECVSKTTDLKKTQITLTYDGKQYLIPEDLRGY >Mature_239_residues MFTPTRLLIVLGFLAVTTQAHAACEIKKFDGHSLSRCKVWPAFPEKAISAKSTFVSDSEGDHDGVFDLELSLLNASNAKP LANYVKPGAYNSDAIRFDDLKIDTARYRLASDVRAFGLRSDFADRLSRANPYAKTDLALYVREGSKLRPVLEGLVIRKEF GEGSGECETKDTKILRTVEIGSSSHNGFADLIVSSSGVVYTSTQSGKECVSKTTDLKKTQITLTYDGKQYLIPEDLRGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26276; Mature: 26276
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTPTRLLIVLGFLAVTTQAHAACEIKKFDGHSLSRCKVWPAFPEKAISAKSTFVSDSEG CCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCC DHDGVFDLELSLLNASNAKPLANYVKPGAYNSDAIRFDDLKIDTARYRLASDVRAFGLRS CCCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCEEECCEEECHHHHHHHHHHHHHCCHH DFADRLSRANPYAKTDLALYVREGSKLRPVLEGLVIRKEFGEGSGECETKDTKILRTVEI HHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE GSSSHNGFADLIVSSSGVVYTSTQSGKECVSKTTDLKKTQITLTYDGKQYLIPEDLRGY CCCCCCCCEEEEECCCCEEEECCCCHHHHHHHCCCCCEEEEEEEECCCEEECCHHCCCC >Mature Secondary Structure MFTPTRLLIVLGFLAVTTQAHAACEIKKFDGHSLSRCKVWPAFPEKAISAKSTFVSDSEG CCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCC DHDGVFDLELSLLNASNAKPLANYVKPGAYNSDAIRFDDLKIDTARYRLASDVRAFGLRS CCCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCEEECCEEECHHHHHHHHHHHHHCCHH DFADRLSRANPYAKTDLALYVREGSKLRPVLEGLVIRKEFGEGSGECETKDTKILRTVEI HHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE GSSSHNGFADLIVSSSGVVYTSTQSGKECVSKTTDLKKTQITLTYDGKQYLIPEDLRGY CCCCCCCCEEEEECCCCEEEECCCCHHHHHHHCCCCCEEEEEEEECCCEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA