Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457533
Identifier: 77457533
GI number: 77457533
Start: 1481526
End: 1482050
Strand: Direct
Name: 77457533
Synonym: Pfl01_1306
Alternate gene names: NA
Gene position: 1481526-1482050 (Clockwise)
Preceding gene: 77457532
Following gene: 77457536
Centisome position: 23.01
GC content: 58.86
Gene sequence:
>525_bases ATGCTCATCAAACGTCTGCTTCTGGGTTTGCTTCTGCTGCTCGGCGGTTGCCAGGCCACTCATTCGCTGAAAGCGCCGGA TGTCGATTACAGCAGCCAGCAATTGCCGGCCATCAACGTCAGTGTGATCGGCATGCCAAGCTGGATGCTGCGTGACGAAT TGCGTCGGCGTGGCACCTTTGAAGAAGTGAAGGCCGGTCGCAGCGAAGACGGCTACAACGTACTGGTGGTCGCCAACAGC GATGTCGGCGGGATTCAGCCGCAGATGCTTCTGAGCGCCTTCACTCTGTTTCTGGTGCCGGTGCCGGTGAGTTTCGACAG CACGGTGGTGTTCAGCCTCAGCCATGGCAAGCAGATACTGGGCGTCTACACCGTGAAGAACCACACCGAATCCTGGCGCG GCGCATTCAACGCCTCGGGCGGTCAGTTCGAACACATGCGCTTGATCAGTGACACGTTCATCGCGCAGATTCTCAAGGAT CAGCCGTTCCACCGCGAAGCCATGAAACGCGCCGCCAGCCTCTGA
Upstream 100 bases:
>100_bases GTCTGGACATGCCGAACCTGTACACCGCCACTCCGTTCATTCGCGAAGAGAACGGCACCAGCGCCTCCGTCTACAAAGCC ATGCTCTCGGGGAAATTCTG
Downstream 100 bases:
>100_bases TCGACGGCCACAAAAAATCCCGCCCGGGGTGAACCGGGCGGGATTTTTTTCGTTCAGCGCAAGGTGTACAGCAAGGCCTG CAATTGCGTACGCCCGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MLIKRLLLGLLLLLGGCQATHSLKAPDVDYSSQQLPAINVSVIGMPSWMLRDELRRRGTFEEVKAGRSEDGYNVLVVANS DVGGIQPQMLLSAFTLFLVPVPVSFDSTVVFSLSHGKQILGVYTVKNHTESWRGAFNASGGQFEHMRLISDTFIAQILKD QPFHREAMKRAASL
Sequences:
>Translated_174_residues MLIKRLLLGLLLLLGGCQATHSLKAPDVDYSSQQLPAINVSVIGMPSWMLRDELRRRGTFEEVKAGRSEDGYNVLVVANS DVGGIQPQMLLSAFTLFLVPVPVSFDSTVVFSLSHGKQILGVYTVKNHTESWRGAFNASGGQFEHMRLISDTFIAQILKD QPFHREAMKRAASL >Mature_174_residues MLIKRLLLGLLLLLGGCQATHSLKAPDVDYSSQQLPAINVSVIGMPSWMLRDELRRRGTFEEVKAGRSEDGYNVLVVANS DVGGIQPQMLLSAFTLFLVPVPVSFDSTVVFSLSHGKQILGVYTVKNHTESWRGAFNASGGQFEHMRLISDTFIAQILKD QPFHREAMKRAASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19216; Mature: 19216
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKRLLLGLLLLLGGCQATHSLKAPDVDYSSQQLPAINVSVIGMPSWMLRDELRRRGTF CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCH EEVKAGRSEDGYNVLVVANSDVGGIQPQMLLSAFTLFLVPVPVSFDSTVVFSLSHGKQIL HHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE GVYTVKNHTESWRGAFNASGGQFEHMRLISDTFIAQILKDQPFHREAMKRAASL EEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MLIKRLLLGLLLLLGGCQATHSLKAPDVDYSSQQLPAINVSVIGMPSWMLRDELRRRGTF CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCH EEVKAGRSEDGYNVLVVANSDVGGIQPQMLLSAFTLFLVPVPVSFDSTVVFSLSHGKQIL HHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE GVYTVKNHTESWRGAFNASGGQFEHMRLISDTFIAQILKDQPFHREAMKRAASL EEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA