Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457527
Identifier: 77457527
GI number: 77457527
Start: 1476765
End: 1477382
Strand: Direct
Name: 77457527
Synonym: Pfl01_1300
Alternate gene names: NA
Gene position: 1476765-1477382 (Clockwise)
Preceding gene: 77457526
Following gene: 77457528
Centisome position: 22.94
GC content: 61.49
Gene sequence:
>618_bases ATGGCATTACTGACTGAACACGAACAACGCAAGGTCGCCGAGGCCATCGCCCGGGTCGAGCGCGACACCGACGCCGAACT GGTGACGGTGCTCGCGGCCCGTGCCGACGACTACGCGTACATCCCGCTGCTGTGGGCCAGCCTGCTGGCGCTGGTGGTGC CGGGGATCGTGCATTACCTGACCGGCTGGCTGACGATGCACAGCCTGTTGCTGGTGCAGTGGGTCAGTTTTGTCGTGCTG TGCCTGGTGTTTCGTCTGCCAAAGGTCACCACTCATCTGATCCCGCGCCACGTCCGCCACTGGCGCGCCTCGAACCTGGC CCGCCGGCAGTTTCTCGAACAGAACCTGCACCACACGGTGGGCAGCACCGGCATGCTGATTTTTGTCTGCGAGGCGGAGC GGTATGTGGAGATTCTGGTGGACGAAGGGATTTCCAGAAAGCTGGATAACAAGAGCTGGGACTCGATTGTCGCGGCGTTT ACCGAGCAGGTACGGCAGGGGCAGACGTTGCAGGGGTTTGTCACGTGTATCGAGGCGTGCGGCGAGTTACTCAAGGTGCA TGTGCCGGTGACGCAGGTGAGGAATGAGTTGCCCAATCGCTTGGTGGTGTTGGGATAA
Upstream 100 bases:
>100_bases GGCGGTGGAGGCGGGGGCTTCAGCGGCGGCGGTGGCAGTTTCGGTGGGGGCGGGTCCTCCGGCGGCTGGTGATAACAATA ATGAGCAGGCACTTCACGAC
Downstream 100 bases:
>100_bases GCCGTTCGGGAAATTAGCCGTGCCCTCGAACGCCATCCCCCCTAAACTAGCGTCCATTCCCGATTTGCCCGTCCGAGGCC GCTTTTTCCCATGTCCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MALLTEHEQRKVAEAIARVERDTDAELVTVLAARADDYAYIPLLWASLLALVVPGIVHYLTGWLTMHSLLLVQWVSFVVL CLVFRLPKVTTHLIPRHVRHWRASNLARRQFLEQNLHHTVGSTGMLIFVCEAERYVEILVDEGISRKLDNKSWDSIVAAF TEQVRQGQTLQGFVTCIEACGELLKVHVPVTQVRNELPNRLVVLG
Sequences:
>Translated_205_residues MALLTEHEQRKVAEAIARVERDTDAELVTVLAARADDYAYIPLLWASLLALVVPGIVHYLTGWLTMHSLLLVQWVSFVVL CLVFRLPKVTTHLIPRHVRHWRASNLARRQFLEQNLHHTVGSTGMLIFVCEAERYVEILVDEGISRKLDNKSWDSIVAAF TEQVRQGQTLQGFVTCIEACGELLKVHVPVTQVRNELPNRLVVLG >Mature_204_residues ALLTEHEQRKVAEAIARVERDTDAELVTVLAARADDYAYIPLLWASLLALVVPGIVHYLTGWLTMHSLLLVQWVSFVVLC LVFRLPKVTTHLIPRHVRHWRASNLARRQFLEQNLHHTVGSTGMLIFVCEAERYVEILVDEGISRKLDNKSWDSIVAAFT EQVRQGQTLQGFVTCIEACGELLKVHVPVTQVRNELPNRLVVLG
Specific function: Unknown
COG id: COG3762
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23251; Mature: 23120
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLTEHEQRKVAEAIARVERDTDAELVTVLAARADDYAYIPLLWASLLALVVPGIVHYL CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH TGWLTMHSLLLVQWVSFVVLCLVFRLPKVTTHLIPRHVRHWRASNLARRQFLEQNLHHTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSTGMLIFVCEAERYVEILVDEGISRKLDNKSWDSIVAAFTEQVRQGQTLQGFVTCIEAC CCCCEEEEEECHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GELLKVHVPVTQVRNELPNRLVVLG HHHHHHCCCHHHHHHHCCCCEEECC >Mature Secondary Structure ALLTEHEQRKVAEAIARVERDTDAELVTVLAARADDYAYIPLLWASLLALVVPGIVHYL CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH TGWLTMHSLLLVQWVSFVVLCLVFRLPKVTTHLIPRHVRHWRASNLARRQFLEQNLHHTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSTGMLIFVCEAERYVEILVDEGISRKLDNKSWDSIVAAFTEQVRQGQTLQGFVTCIEAC CCCCEEEEEECHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GELLKVHVPVTQVRNELPNRLVVLG HHHHHHCCCHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA