Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457528
Identifier: 77457528
GI number: 77457528
Start: 1477473
End: 1478705
Strand: Direct
Name: 77457528
Synonym: Pfl01_1301
Alternate gene names: NA
Gene position: 1477473-1478705 (Clockwise)
Preceding gene: 77457527
Following gene: 77457530
Centisome position: 22.95
GC content: 59.85
Gene sequence:
>1233_bases ATGTCCGTTACCGCTCCTTCCGCATCTGCCAAACCGGCGCCCGATCACCACGCCCGGTTCATCGAGCTGCTGCAAACCAG CCTCGAACAGAACGGCTTTATCAAACTGGTGCTGGCCAAATACGTCGGCGAAGAAGCGGACCTGCAGCGGATCATCATCA AGCCGGTGACGGTCAAGGCGCAGCCGTGCCTGTCGTTCGTTTATCGCTACAAGACCCGCGACATCACCAAGAACCTGCCA TTGGACGAAGCAGTCACGACGATTGCCGGGCTGTTGCCGGCGGCGTTCAAGAATGCGCATTTGCTGGCGCTGACGGACGA AGCCCAGCTCGAATACAGCAAAAAGGGCAAGAGCTCGCTGTTCATGAGCAAACCTCAGCAATTGCGTGAAGTGCCTTCCG CCGAGCACAACCGCGAGAAGAACCGCTATCTCGATCTGAACCGGCCGTTCCTCAAGGATCTGGGCGTGACCAATGCCCAG CACGAGCTGATTCCAGCGATGTCGCGCAAGTGGAAGCAGATCAACAAATTCATCGAAGTCTTCAGCCACGCGCTGACCTC GTCGCCGCTGGCCCTGGACAAACCGGTGCGGGTGGCGGATTTCGGTTCAGGCAAGGGTTACCTGACGTTCGCCATTCATG ACTATTTGCGCAACACCCTGAAGGCCGAGGGCGAAGTCACCGGCGTCGAGCTGCGTGAAGAGATGGTCAACCTGTGCAAC ACCGCTGCCGCGAAACTGGAACACCCGGGGCTGGTGTTCAAATGCGGCGATGTGCGCAGCGTGGCGCCGAGCGAGCTGGA CGTGATGATCGCCCTGCATGCCTGCGACATTGCCACCGACTACGCGATCCACACCGGCATCCGCTCCGGCGCCTCGATCA TCATGTGCTCGCCGTGCTGCCACAAACAGATCCGCTTGCAGATCCAGAGCCCGGCGCTGCTCAAGCCGATGCTGCAATAT GGCCTGCACCTGGGCCAGCAGGCGGAAATGGTTACCGACAGCCTGCGCGCGCTATTCCTCGAAGCCTGCGGTTACGAGAC CAAGGTGTTCGAGTTCATCTCGCTGGACCACACCAACAAGAACAAGATGATCCTCGCCGTGAAGCGCGCCGAGCCGGTGG ACCCGACTCAGCTGCTGGTGAAGATTCAAGAGCTCAAGGCGTTCTACCAGATCAGCGAGCACTGCCTCGAAACCCTGCTG CTCGCTGACGGCCTGCTGACGCTCAAGGCTTGA
Upstream 100 bases:
>100_bases GTTGGGATAAGCCGTTCGGGAAATTAGCCGTGCCCTCGAACGCCATCCCCCCTAAACTAGCGTCCATTCCCGATTTGCCC GTCCGAGGCCGCTTTTTCCC
Downstream 100 bases:
>100_bases GCTGAACCCCGGCCGGTAGCGTGCCCGGTTGAGCCGGGCGCACCGCGGTCTTGCGCCCGAGCATCACCGTCGCGATCACC CCGCAGGCGAACAGCCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSVTAPSASAKPAPDHHARFIELLQTSLEQNGFIKLVLAKYVGEEADLQRIIIKPVTVKAQPCLSFVYRYKTRDITKNLP LDEAVTTIAGLLPAAFKNAHLLALTDEAQLEYSKKGKSSLFMSKPQQLREVPSAEHNREKNRYLDLNRPFLKDLGVTNAQ HELIPAMSRKWKQINKFIEVFSHALTSSPLALDKPVRVADFGSGKGYLTFAIHDYLRNTLKAEGEVTGVELREEMVNLCN TAAAKLEHPGLVFKCGDVRSVAPSELDVMIALHACDIATDYAIHTGIRSGASIIMCSPCCHKQIRLQIQSPALLKPMLQY GLHLGQQAEMVTDSLRALFLEACGYETKVFEFISLDHTNKNKMILAVKRAEPVDPTQLLVKIQELKAFYQISEHCLETLL LADGLLTLKA
Sequences:
>Translated_410_residues MSVTAPSASAKPAPDHHARFIELLQTSLEQNGFIKLVLAKYVGEEADLQRIIIKPVTVKAQPCLSFVYRYKTRDITKNLP LDEAVTTIAGLLPAAFKNAHLLALTDEAQLEYSKKGKSSLFMSKPQQLREVPSAEHNREKNRYLDLNRPFLKDLGVTNAQ HELIPAMSRKWKQINKFIEVFSHALTSSPLALDKPVRVADFGSGKGYLTFAIHDYLRNTLKAEGEVTGVELREEMVNLCN TAAAKLEHPGLVFKCGDVRSVAPSELDVMIALHACDIATDYAIHTGIRSGASIIMCSPCCHKQIRLQIQSPALLKPMLQY GLHLGQQAEMVTDSLRALFLEACGYETKVFEFISLDHTNKNKMILAVKRAEPVDPTQLLVKIQELKAFYQISEHCLETLL LADGLLTLKA >Mature_409_residues SVTAPSASAKPAPDHHARFIELLQTSLEQNGFIKLVLAKYVGEEADLQRIIIKPVTVKAQPCLSFVYRYKTRDITKNLPL DEAVTTIAGLLPAAFKNAHLLALTDEAQLEYSKKGKSSLFMSKPQQLREVPSAEHNREKNRYLDLNRPFLKDLGVTNAQH ELIPAMSRKWKQINKFIEVFSHALTSSPLALDKPVRVADFGSGKGYLTFAIHDYLRNTLKAEGEVTGVELREEMVNLCNT AAAKLEHPGLVFKCGDVRSVAPSELDVMIALHACDIATDYAIHTGIRSGASIIMCSPCCHKQIRLQIQSPALLKPMLQYG LHLGQQAEMVTDSLRALFLEACGYETKVFEFISLDHTNKNKMILAVKRAEPVDPTQLLVKIQELKAFYQISEHCLETLLL ADGLLTLKA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45616; Mature: 45484
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTAPSASAKPAPDHHARFIELLQTSLEQNGFIKLVLAKYVGEEADLQRIIIKPVTVKA CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHCCCEEEEECCEECH QPCLSFVYRYKTRDITKNLPLDEAVTTIAGLLPAAFKNAHLLALTDEAQLEYSKKGKSSL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCH FMSKPQQLREVPSAEHNREKNRYLDLNRPFLKDLGVTNAQHELIPAMSRKWKQINKFIEV HHCCCHHHHHCCCCCCCCCCCCEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FSHALTSSPLALDKPVRVADFGSGKGYLTFAIHDYLRNTLKAEGEVTGVELREEMVNLCN HHHHHCCCCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TAAAKLEHPGLVFKCGDVRSVAPSELDVMIALHACDIATDYAIHTGIRSGASIIMCSPCC HHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCEEEECHHC HKQIRLQIQSPALLKPMLQYGLHLGQQAEMVTDSLRALFLEACGYETKVFEFISLDHTNK CCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCC NKMILAVKRAEPVDPTQLLVKIQELKAFYQISEHCLETLLLADGLLTLKA CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure SVTAPSASAKPAPDHHARFIELLQTSLEQNGFIKLVLAKYVGEEADLQRIIIKPVTVKA CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHCCCEEEEECCEECH QPCLSFVYRYKTRDITKNLPLDEAVTTIAGLLPAAFKNAHLLALTDEAQLEYSKKGKSSL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCH FMSKPQQLREVPSAEHNREKNRYLDLNRPFLKDLGVTNAQHELIPAMSRKWKQINKFIEV HHCCCHHHHHCCCCCCCCCCCCEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FSHALTSSPLALDKPVRVADFGSGKGYLTFAIHDYLRNTLKAEGEVTGVELREEMVNLCN HHHHHCCCCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TAAAKLEHPGLVFKCGDVRSVAPSELDVMIALHACDIATDYAIHTGIRSGASIIMCSPCC HHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCEEEECHHC HKQIRLQIQSPALLKPMLQYGLHLGQQAEMVTDSLRALFLEACGYETKVFEFISLDHTNK CCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCC NKMILAVKRAEPVDPTQLLVKIQELKAFYQISEHCLETLLLADGLLTLKA CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA