| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is catD [H]
Identifier: 77457501
GI number: 77457501
Start: 1447764
End: 1448555
Strand: Direct
Name: catD [H]
Synonym: Pfl01_1274
Alternate gene names: 77457501
Gene position: 1447764-1448555 (Clockwise)
Preceding gene: 77457500
Following gene: 77457502
Centisome position: 22.49
GC content: 62.75
Gene sequence:
>792_bases GTGGCTTTCGTTCAACTCGCCGATGGCGAACTGCATTACTCATTGGAAAGCCCGGTCGATGCGCCGGTGCTGGTGCTGTC CAACTCGCTGGGCACCGACCTGCACATGTGGGACGTGCAGATGCCGGCCTTCACCGAACATTTTCGGGTGCTGCGTTTCG ACACGCGCGGGCATGGCCAGTCGCTGGTGACGCCGGGCCCTTACAGCATCGAGCAACTGGGCCGCGACGTGCTGGCGCTG CTGGATGCGCTGCACATCGAACGCGCACATTTCTGTGGTCTGTCGATGGGCGGGTTGATCGGCCAGTGGCTGGGGATCAA CGCCGGCCAGCGTTTGAACAAACTGATCGTCTGCAACACGGCGGCGAAAATCGGCGATCCGTCGGTGTGGAATCCGCGCA TCGAAACCGTGCTGCGCGACGGCCCGGCGGCAATGGTCGCGTTGCGCGATGCATCGATTGCCCGCTGGTTTACCCCGGAC TTTTCTGCCGCCAATCCGGCCGCAGCGAAGCAGATCACCGACATGCTGGCAGCGACCAATCCTGAAGGTTACGCCGCCAA CTGCGCGGCGGTGCGCGATGCGGATTTCCGTGAGCAGTTGTCGTCGATCAAGGCGCCGCTGCTGGTGATTGCCGGTACCG AAGATGCGGTGACGCCACCGTCCGGCGGGCATTTCATTCAGGAACATGTGCGTGGCGCCGAGTACGCCGAGTTTTATGCG GCGCACCTTTCCAACGTTCAGGCCGGCGACGCGTTCAGCGACCGCGTGCTGACCTTTTTGCTGGCTGATTGA
Upstream 100 bases:
>100_bases TCATCTGCTGGATCCCGCCCACTACCTCGGTCAGGCGCAGGTCTGGGTCGAGCGGGCAGTAGCCGAACACAACGCATTGT CTGACTGAAAGGAGAGGGCT
Downstream 100 bases:
>100_bases GGGGATTTCCGTGGACGAGAAACAACGTTACGACGACGGCATGCAAGTGCGCCGCGCGGTGCTCGGCGACGCTCACGTCG ATCGCAGCCTGACCACGCTG
Product: 3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MAFVQLADGELHYSLESPVDAPVLVLSNSLGTDLHMWDVQMPAFTEHFRVLRFDTRGHGQSLVTPGPYSIEQLGRDVLAL LDALHIERAHFCGLSMGGLIGQWLGINAGQRLNKLIVCNTAAKIGDPSVWNPRIETVLRDGPAAMVALRDASIARWFTPD FSAANPAAAKQITDMLAATNPEGYAANCAAVRDADFREQLSSIKAPLLVIAGTEDAVTPPSGGHFIQEHVRGAEYAEFYA AHLSNVQAGDAFSDRVLTFLLAD
Sequences:
>Translated_263_residues MAFVQLADGELHYSLESPVDAPVLVLSNSLGTDLHMWDVQMPAFTEHFRVLRFDTRGHGQSLVTPGPYSIEQLGRDVLAL LDALHIERAHFCGLSMGGLIGQWLGINAGQRLNKLIVCNTAAKIGDPSVWNPRIETVLRDGPAAMVALRDASIARWFTPD FSAANPAAAKQITDMLAATNPEGYAANCAAVRDADFREQLSSIKAPLLVIAGTEDAVTPPSGGHFIQEHVRGAEYAEFYA AHLSNVQAGDAFSDRVLTFLLAD >Mature_262_residues AFVQLADGELHYSLESPVDAPVLVLSNSLGTDLHMWDVQMPAFTEHFRVLRFDTRGHGQSLVTPGPYSIEQLGRDVLALL DALHIERAHFCGLSMGGLIGQWLGINAGQRLNKLIVCNTAAKIGDPSVWNPRIETVLRDGPAAMVALRDASIARWFTPDF SAANPAAAKQITDMLAATNPEGYAANCAAVRDADFREQLSSIKAPLLVIAGTEDAVTPPSGGHFIQEHVRGAEYAEFYAA HLSNVQAGDAFSDRVLTFLLAD
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 28378; Mature: 28247
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFVQLADGELHYSLESPVDAPVLVLSNSLGTDLHMWDVQMPAFTEHFRVLRFDTRGHGQ CCEEEECCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCHHHHCEEEEEEECCCCCC SLVTPGPYSIEQLGRDVLALLDALHIERAHFCGLSMGGLIGQWLGINAGQRLNKLIVCNT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHCEEEEEEC AAKIGDPSVWNPRIETVLRDGPAAMVALRDASIARWFTPDFSAANPAAAKQITDMLAATN HHHCCCCCCCCHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCC PEGYAANCAAVRDADFREQLSSIKAPLLVIAGTEDAVTPPSGGHFIQEHVRGAEYAEFYA CCCCCCCHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHH AHLSNVQAGDAFSDRVLTFLLAD HHHCCCCCCCCHHHHHHEEEECC >Mature Secondary Structure AFVQLADGELHYSLESPVDAPVLVLSNSLGTDLHMWDVQMPAFTEHFRVLRFDTRGHGQ CEEEECCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCHHHHCEEEEEEECCCCCC SLVTPGPYSIEQLGRDVLALLDALHIERAHFCGLSMGGLIGQWLGINAGQRLNKLIVCNT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHCEEEEEEC AAKIGDPSVWNPRIETVLRDGPAAMVALRDASIARWFTPDFSAANPAAAKQITDMLAATN HHHCCCCCCCCHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCC PEGYAANCAAVRDADFREQLSSIKAPLLVIAGTEDAVTPPSGGHFIQEHVRGAEYAEFYA CCCCCCCHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHH AHLSNVQAGDAFSDRVLTFLLAD HHHCCCCCCCCHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]