| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is exuT [H]
Identifier: 77457481
GI number: 77457481
Start: 1426763
End: 1428112
Strand: Direct
Name: exuT [H]
Synonym: Pfl01_1254
Alternate gene names: 77457481
Gene position: 1426763-1428112 (Clockwise)
Preceding gene: 77457478
Following gene: 77457483
Centisome position: 22.16
GC content: 63.26
Gene sequence:
>1350_bases ATGCAGAACTCGACCCAAGCGGCGAATGCCTGGCGCATTCTGTTCCTGCTGTTCCTTGCCAACCTGTTCAACTTCTTCGA CCGCACCATCCCGGCGATCATCATCGAGCCGATCCGCATGGAATGGCACCTCAGCGACTTTCAGCTGGGGATTGTCGGCA CTGCGTTCACTCTGGTCTACGCGATTGCCGGGCTACCACTGGGCCGAATGGCCGACACCGGTTCGCGCAGCAAACTGATG GGTTGGGGCCTGGCGACCTGGAGCGCGCTCACTGCCGTGAACGGTCTGGTCGGCAGTTTCTGGAGTTTTCTGCTGGTGCG CATGGGCATCGGCATCGGTGAAGCCAGTTACGCGCCCGCCGCCAACTCGCTGATCGGCGACCTGTTCCCGGCCCATCGCC GGGCCCGGGCCATGGGCATCTTCATGCTCGGCCTGCCGCTGGGACTGCTGCTGGCCTTCTTCACCATCGGCTGGATGGTC AAGGCATTCGACAGCTGGCGCGCACCGTTTTTCATCGCCGCCGTGCCGGGGCTGGTGCTGGCGGTGTTCATGTTTTTCAT CAAGGAACCCAAGCGTGGCGCGGCGGAAACCGTACAGGTGTCCCAGGAGAAAGTCGACAGGCCGATTCGTCGGGTCCTCG CCATTCCGACCTTCCTGTGGCTGGTGATGGCCGGGCTGTGCTTCAACTTCGCGACCTACGCCTGCAACTCGTTCCTGGTG CCGATGCTCCAGCGTTATTTCCTGATGCCGTTGCAGGAAGCGGCGGTGGCGACCGGGGTAATCGTCGGTGTGACCGGGTT GATCGGCCTGACCCTCGGCGGCTGGATCGCCGACAAGATTCACCAGCGGGTGGCCAACGGGCGACTGCTGTTTGCCGCGT TCAGCCTGATCATCTCGACCCTGTGCACGGCGTGGGCGCTGCATGCCGGGCGTATCGAGATCGGGGTGTTTGTCGCGGTG TTCAGTGTGGGCTGGCTGTTCGCCTACAACTTCTACACCTGCGTGTACACGGCGATTCAGGACGTGGTCGAGCCGCGCCT GCGGGCTACGGCGATGGCGCTGTTCTTTGCCGGCTTGTATTTGCTCGGCGGCGGGCTGGGTCCGGTGGTGGTCGGCGGCT TGTCGGATCACTTCGCCAAGTCGGCGATGGTCGCGGCGGGCGCCGAGCAGATGACCGAAGCCTTCAAGGCCGTCGGCCTG CATGATGCGATGTACCTGATTCCGGTGGCGTTGTTCCTGACCATGGTGTTCCTGTTCCTCGCCTCGCGCTGCTTTGTGCG GGATGCGAAGCGGATGAAGGAGGGGCTGGTGGCAGTGGTTGAGCCGCAGAATCAGGCCGTTACCGCTTGA
Upstream 100 bases:
>100_bases CGAATGATCACAGACAGCCCCGACGAGCGTGACTAGATTGCAGGTTCCGGGCTCGGATGCGTTGGCAGTGAAGCCCTCAT AACAATAAAGAGACGGACCC
Downstream 100 bases:
>100_bases TCGGAGAGGCAAACAAAAAGGCCCGCATCGCTGCGGGCCTTTTCGTTTTTGGCGATGGAGCAGGGCGGTTTAACCCGCCA CCAGCACCCGGATCGCTTCC
Product: general substrate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MQNSTQAANAWRILFLLFLANLFNFFDRTIPAIIIEPIRMEWHLSDFQLGIVGTAFTLVYAIAGLPLGRMADTGSRSKLM GWGLATWSALTAVNGLVGSFWSFLLVRMGIGIGEASYAPAANSLIGDLFPAHRRARAMGIFMLGLPLGLLLAFFTIGWMV KAFDSWRAPFFIAAVPGLVLAVFMFFIKEPKRGAAETVQVSQEKVDRPIRRVLAIPTFLWLVMAGLCFNFATYACNSFLV PMLQRYFLMPLQEAAVATGVIVGVTGLIGLTLGGWIADKIHQRVANGRLLFAAFSLIISTLCTAWALHAGRIEIGVFVAV FSVGWLFAYNFYTCVYTAIQDVVEPRLRATAMALFFAGLYLLGGGLGPVVVGGLSDHFAKSAMVAAGAEQMTEAFKAVGL HDAMYLIPVALFLTMVFLFLASRCFVRDAKRMKEGLVAVVEPQNQAVTA
Sequences:
>Translated_449_residues MQNSTQAANAWRILFLLFLANLFNFFDRTIPAIIIEPIRMEWHLSDFQLGIVGTAFTLVYAIAGLPLGRMADTGSRSKLM GWGLATWSALTAVNGLVGSFWSFLLVRMGIGIGEASYAPAANSLIGDLFPAHRRARAMGIFMLGLPLGLLLAFFTIGWMV KAFDSWRAPFFIAAVPGLVLAVFMFFIKEPKRGAAETVQVSQEKVDRPIRRVLAIPTFLWLVMAGLCFNFATYACNSFLV PMLQRYFLMPLQEAAVATGVIVGVTGLIGLTLGGWIADKIHQRVANGRLLFAAFSLIISTLCTAWALHAGRIEIGVFVAV FSVGWLFAYNFYTCVYTAIQDVVEPRLRATAMALFFAGLYLLGGGLGPVVVGGLSDHFAKSAMVAAGAEQMTEAFKAVGL HDAMYLIPVALFLTMVFLFLASRCFVRDAKRMKEGLVAVVEPQNQAVTA >Mature_449_residues MQNSTQAANAWRILFLLFLANLFNFFDRTIPAIIIEPIRMEWHLSDFQLGIVGTAFTLVYAIAGLPLGRMADTGSRSKLM GWGLATWSALTAVNGLVGSFWSFLLVRMGIGIGEASYAPAANSLIGDLFPAHRRARAMGIFMLGLPLGLLLAFFTIGWMV KAFDSWRAPFFIAAVPGLVLAVFMFFIKEPKRGAAETVQVSQEKVDRPIRRVLAIPTFLWLVMAGLCFNFATYACNSFLV PMLQRYFLMPLQEAAVATGVIVGVTGLIGLTLGGWIADKIHQRVANGRLLFAAFSLIISTLCTAWALHAGRIEIGVFVAV FSVGWLFAYNFYTCVYTAIQDVVEPRLRATAMALFFAGLYLLGGGLGPVVVGGLSDHFAKSAMVAAGAEQMTEAFKAVGL HDAMYLIPVALFLTMVFLFLASRCFVRDAKRMKEGLVAVVEPQNQAVTA
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI185136021, Length=446, Percent_Identity=23.542600896861, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI215490102, Length=383, Percent_Identity=26.6318537859008, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI215490096, Length=408, Percent_Identity=26.4705882352941, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI14042968, Length=408, Percent_Identity=26.4705882352941, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI194239645, Length=379, Percent_Identity=26.1213720316623, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI215490100, Length=394, Percent_Identity=26.1421319796954, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI215490098, Length=383, Percent_Identity=25.5874673629243, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI2367379, Length=318, Percent_Identity=27.6729559748428, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1789152, Length=324, Percent_Identity=24.3827160493827, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789515, Length=202, Percent_Identity=28.2178217821782, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI87082320, Length=194, Percent_Identity=26.2886597938144, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI193209775, Length=472, Percent_Identity=23.9406779661017, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71992409, Length=471, Percent_Identity=24.416135881104, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17539092, Length=457, Percent_Identity=24.507658643326, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17557872, Length=476, Percent_Identity=23.5294117647059, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI17864456, Length=394, Percent_Identity=25.6345177664975, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24654039, Length=394, Percent_Identity=25.6345177664975, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24654037, Length=395, Percent_Identity=25.3164556962025, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24654041, Length=395, Percent_Identity=25.3164556962025, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24654044, Length=193, Percent_Identity=27.4611398963731, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24640209, Length=195, Percent_Identity=26.1538461538462, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48943; Mature: 48943
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNSTQAANAWRILFLLFLANLFNFFDRTIPAIIIEPIRMEWHLSDFQLGIVGTAFTLVY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH AIAGLPLGRMADTGSRSKLMGWGLATWSALTAVNGLVGSFWSFLLVRMGIGIGEASYAPA HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ANSLIGDLFPAHRRARAMGIFMLGLPLGLLLAFFTIGWMVKAFDSWRAPFFIAAVPGLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AVFMFFIKEPKRGAAETVQVSQEKVDRPIRRVLAIPTFLWLVMAGLCFNFATYACNSFLV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMLQRYFLMPLQEAAVATGVIVGVTGLIGLTLGGWIADKIHQRVANGRLLFAAFSLIIST HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LCTAWALHAGRIEIGVFVAVFSVGWLFAYNFYTCVYTAIQDVVEPRLRATAMALFFAGLY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGGGLGPVVVGGLSDHFAKSAMVAAGAEQMTEAFKAVGLHDAMYLIPVALFLTMVFLFL HHCCCCHHHEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRCFVRDAKRMKEGLVAVVEPQNQAVTA HHHHHHHHHHHHHCCCEEEECCCCCCCCC >Mature Secondary Structure MQNSTQAANAWRILFLLFLANLFNFFDRTIPAIIIEPIRMEWHLSDFQLGIVGTAFTLVY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH AIAGLPLGRMADTGSRSKLMGWGLATWSALTAVNGLVGSFWSFLLVRMGIGIGEASYAPA HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ANSLIGDLFPAHRRARAMGIFMLGLPLGLLLAFFTIGWMVKAFDSWRAPFFIAAVPGLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AVFMFFIKEPKRGAAETVQVSQEKVDRPIRRVLAIPTFLWLVMAGLCFNFATYACNSFLV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMLQRYFLMPLQEAAVATGVIVGVTGLIGLTLGGWIADKIHQRVANGRLLFAAFSLIIST HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LCTAWALHAGRIEIGVFVAVFSVGWLFAYNFYTCVYTAIQDVVEPRLRATAMALFFAGLY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGGGLGPVVVGGLSDHFAKSAMVAAGAEQMTEAFKAVGLHDAMYLIPVALFLTMVFLFL HHCCCCHHHEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRCFVRDAKRMKEGLVAVVEPQNQAVTA HHHHHHHHHHHHHCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]