| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457397
Identifier: 77457397
GI number: 77457397
Start: 1343031
End: 1344233
Strand: Direct
Name: 77457397
Synonym: Pfl01_1170
Alternate gene names: NA
Gene position: 1343031-1344233 (Clockwise)
Preceding gene: 77457396
Following gene: 77457398
Centisome position: 20.86
GC content: 57.86
Gene sequence:
>1203_bases GTGGATTATCCGAAAAGCGTTCCCGGCTCAGGCCTGGAGAATGGCAAGTTCGTCGATGAAGACCCGATTGCCGGAAAACC GGGATCGTTGATCCCGGCCAGTTGGGGCAACAGTGTGACGCAGGAGATTCTCAACGCGATCACGGCCGCCGGCCTGACGC CGGATGAGGAGCAGACCGATCAACTGGCACAGGCCATTCGGCAACTGGCCAAGCCCGATCCGCTGCAGCAGTTTCCTGTG CAGGTGTATCGCAAGAATCTGTTGATCAATGGCGGATTCAATATCTGGCAACGCGGCACGACCAATCAGGCGCCGAACAT CGGTGGGTATGTAGCGGATCGTTTCCGGTGCGACTGGAACGGCAACGCAGGTGTCAGCATTTCGCGCCAGGATTTTCCCC TCGGTCAAACGGAAGTCGTGGGTGAACCCGCTTATTTCCTGCGCTGGCAGCAGGCCACCGCAGGCACGGGAGCAACGGTG CATAAAGTCGCCCAGAGCATTGAATCGGTGAGGACTCTGGCCGGGCGAACGGCTACGGTCAGCTTCTGGGCGCGATCCGA TGCGACGCGTCCTTTGCGCGTCACGATTGCTCAGCAGTTCGGAACGGGCGGTTCGGAGGGTGTGGTGAAGGTTGTCGACG TCTTTCAACTGAGTACGTCGTGGAAGAAATACAGCGCAACGTTTCAGGTGCCAACCATCGCCGGGAAAATGCTGGGCGTG AATGACTGCCTGACCTTGTCGTTCGATCTGCCGCTCAACGTGTTGCAGACCGTCGATCTGGCACAGATGCAATTGGAGGA GGGGCCGGTTGCAACACCGTTTGAATACCGTCCAGCGGCGGAAGAGTTGACTCTCTGTCAGCGCTATTTCGAAAAATCTT TTGTAAACCGTTTGCCGATCCGTTCGAACAACGGTCCAGGAACCTGTATCGCCACCTTTTCCCAAGTAGCGGCAGCCAAT TCCGGCCAATATGGAATGTGCATCGATATGCAGGTGCCCAAGCGAGTTCAGCCAACGGTCGTGACGTATTGCCCTGGTGA GGCGAGCAATCAAGTCTGGCATTCATCGCTTGCGAAGGCCTGCACAGGAACCATCCTGCAAAGTGTGAGCGAGCGAGGGT TTGCGCTTGCCACCGTGACGCCCGTAGGCAGCTTTCCCGGGCAGGCATTGCAGGTCGATTGGACCGCGGACGCGGAAATC TAG
Upstream 100 bases:
>100_bases AATTTCCGGATGCCCAGGCTCGCCCTGTAGAGCCCGACTGGCTTGAAGGCTTGCTGCGGTCGAACGGCTGAACCGTTGAC CCGATCAATGAGGAATCAAA
Downstream 100 bases:
>100_bases GGGACAAGTCCATGAGTTATCAGCTCACATCGTATGGCGTTCTGCGCCTGAGTGATTCAGCGTTTATTCCACAGGATCCC GTTAATCGGGACTGGCTCGA
Product: carbohydrate-binding CenC-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MDYPKSVPGSGLENGKFVDEDPIAGKPGSLIPASWGNSVTQEILNAITAAGLTPDEEQTDQLAQAIRQLAKPDPLQQFPV QVYRKNLLINGGFNIWQRGTTNQAPNIGGYVADRFRCDWNGNAGVSISRQDFPLGQTEVVGEPAYFLRWQQATAGTGATV HKVAQSIESVRTLAGRTATVSFWARSDATRPLRVTIAQQFGTGGSEGVVKVVDVFQLSTSWKKYSATFQVPTIAGKMLGV NDCLTLSFDLPLNVLQTVDLAQMQLEEGPVATPFEYRPAAEELTLCQRYFEKSFVNRLPIRSNNGPGTCIATFSQVAAAN SGQYGMCIDMQVPKRVQPTVVTYCPGEASNQVWHSSLAKACTGTILQSVSERGFALATVTPVGSFPGQALQVDWTADAEI
Sequences:
>Translated_400_residues MDYPKSVPGSGLENGKFVDEDPIAGKPGSLIPASWGNSVTQEILNAITAAGLTPDEEQTDQLAQAIRQLAKPDPLQQFPV QVYRKNLLINGGFNIWQRGTTNQAPNIGGYVADRFRCDWNGNAGVSISRQDFPLGQTEVVGEPAYFLRWQQATAGTGATV HKVAQSIESVRTLAGRTATVSFWARSDATRPLRVTIAQQFGTGGSEGVVKVVDVFQLSTSWKKYSATFQVPTIAGKMLGV NDCLTLSFDLPLNVLQTVDLAQMQLEEGPVATPFEYRPAAEELTLCQRYFEKSFVNRLPIRSNNGPGTCIATFSQVAAAN SGQYGMCIDMQVPKRVQPTVVTYCPGEASNQVWHSSLAKACTGTILQSVSERGFALATVTPVGSFPGQALQVDWTADAEI >Mature_400_residues MDYPKSVPGSGLENGKFVDEDPIAGKPGSLIPASWGNSVTQEILNAITAAGLTPDEEQTDQLAQAIRQLAKPDPLQQFPV QVYRKNLLINGGFNIWQRGTTNQAPNIGGYVADRFRCDWNGNAGVSISRQDFPLGQTEVVGEPAYFLRWQQATAGTGATV HKVAQSIESVRTLAGRTATVSFWARSDATRPLRVTIAQQFGTGGSEGVVKVVDVFQLSTSWKKYSATFQVPTIAGKMLGV NDCLTLSFDLPLNVLQTVDLAQMQLEEGPVATPFEYRPAAEELTLCQRYFEKSFVNRLPIRSNNGPGTCIATFSQVAAAN SGQYGMCIDMQVPKRVQPTVVTYCPGEASNQVWHSSLAKACTGTILQSVSERGFALATVTPVGSFPGQALQVDWTADAEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43172; Mature: 43172
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYPKSVPGSGLENGKFVDEDPIAGKPGSLIPASWGNSVTQEILNAITAAGLTPDEEQTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH QLAQAIRQLAKPDPLQQFPVQVYRKNLLINGGFNIWQRGTTNQAPNIGGYVADRFRCDWN HHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCEEECCCCCCCCCCCCEEEEEEEECCC GNAGVSISRQDFPLGQTEVVGEPAYFLRWQQATAGTGATVHKVAQSIESVRTLAGRTATV CCCCEEECCCCCCCCCHHCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEE SFWARSDATRPLRVTIAQQFGTGGSEGVVKVVDVFQLSTSWKKYSATFQVPTIAGKMLGV EEEECCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHCCHHHHEEEEECHHHHHHHCCC NDCLTLSFDLPLNVLQTVDLAQMQLEEGPVATPFEYRPAAEELTLCQRYFEKSFVNRLPI CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC RSNNGPGTCIATFSQVAAANSGQYGMCIDMQVPKRVQPTVVTYCPGEASNQVWHSSLAKA CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHH CTGTILQSVSERGFALATVTPVGSFPGQALQVDWTADAEI HHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MDYPKSVPGSGLENGKFVDEDPIAGKPGSLIPASWGNSVTQEILNAITAAGLTPDEEQTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH QLAQAIRQLAKPDPLQQFPVQVYRKNLLINGGFNIWQRGTTNQAPNIGGYVADRFRCDWN HHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCEEECCCCCCCCCCCCEEEEEEEECCC GNAGVSISRQDFPLGQTEVVGEPAYFLRWQQATAGTGATVHKVAQSIESVRTLAGRTATV CCCCEEECCCCCCCCCHHCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEE SFWARSDATRPLRVTIAQQFGTGGSEGVVKVVDVFQLSTSWKKYSATFQVPTIAGKMLGV EEEECCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHCCHHHHEEEEECHHHHHHHCCC NDCLTLSFDLPLNVLQTVDLAQMQLEEGPVATPFEYRPAAEELTLCQRYFEKSFVNRLPI CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC RSNNGPGTCIATFSQVAAANSGQYGMCIDMQVPKRVQPTVVTYCPGEASNQVWHSSLAKA CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHH CTGTILQSVSERGFALATVTPVGSFPGQALQVDWTADAEI HHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA