| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457398
Identifier: 77457398
GI number: 77457398
Start: 1344245
End: 1344487
Strand: Direct
Name: 77457398
Synonym: Pfl01_1171
Alternate gene names: NA
Gene position: 1344245-1344487 (Clockwise)
Preceding gene: 77457397
Following gene: 77457399
Centisome position: 20.88
GC content: 55.56
Gene sequence:
>243_bases ATGAGTTATCAGCTCACATCGTATGGCGTTCTGCGCCTGAGTGATTCAGCGTTTATTCCACAGGATCCCGTTAATCGGGA CTGGCTCGAGTACCAGGAGTGGCTGGTGTCCGGAGGACAGGTACTGCCACTGGACCCGCCGCTAGAGAGGCTGACGGCCA ATCAAGGCATGCTGGGGTTGTTCAAGCGAATGATCCAGGTGTCCCCGGACAGCACGCTGAAAACTGAGGTAAACAATGGC TGA
Upstream 100 bases:
>100_bases GAGGGTTTGCGCTTGCCACCGTGACGCCCGTAGGCAGCTTTCCCGGGCAGGCATTGCAGGTCGATTGGACCGCGGACGCG GAAATCTAGGGGACAAGTCC
Downstream 100 bases:
>100_bases TCAGCTTTGGTCGCCATCCGTGATTCAATCGGCGCATCCAGGGAGGACCGAGCATTATGCAAATCACTGAAGACAACCTA CTCAACATCATGCCCAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSYQLTSYGVLRLSDSAFIPQDPVNRDWLEYQEWLVSGGQVLPLDPPLERLTANQGMLGLFKRMIQVSPDSTLKTEVNNG
Sequences:
>Translated_80_residues MSYQLTSYGVLRLSDSAFIPQDPVNRDWLEYQEWLVSGGQVLPLDPPLERLTANQGMLGLFKRMIQVSPDSTLKTEVNNG >Mature_79_residues SYQLTSYGVLRLSDSAFIPQDPVNRDWLEYQEWLVSGGQVLPLDPPLERLTANQGMLGLFKRMIQVSPDSTLKTEVNNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9026; Mature: 8895
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQLTSYGVLRLSDSAFIPQDPVNRDWLEYQEWLVSGGQVLPLDPPLERLTANQGMLGL CCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHCCCCHHHH FKRMIQVSPDSTLKTEVNNG HHHHHHCCCCCCEECCCCCC >Mature Secondary Structure SYQLTSYGVLRLSDSAFIPQDPVNRDWLEYQEWLVSGGQVLPLDPPLERLTANQGMLGL CCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHCCCCHHHH FKRMIQVSPDSTLKTEVNNG HHHHHHCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA