| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is lptG [H]
Identifier: 77457218
GI number: 77457218
Start: 1152211
End: 1153272
Strand: Direct
Name: lptG [H]
Synonym: Pfl01_0991
Alternate gene names: 77457218
Gene position: 1152211-1153272 (Clockwise)
Preceding gene: 77457217
Following gene: 77457219
Centisome position: 17.9
GC content: 61.68
Gene sequence:
>1062_bases GTGGTTAAACTCGACCGCTACATCGGCAGCAGCGTGTTCATCGCGATCATCGCGGTGCTGGCGATCATTCTCGGCCTGGC TACCTTGTTTGCGTTCATCGACGAGATGGGCGATGTCAGTGATACCTACACCCTGGTCGATGTCCTGAGCTTCGTGCTCC TGACCGCCCCGCGCCGGCTCTACGACATGCTGCCGATGGCGGCGCTGATCGGTTGCCTGATCGGCCTTGGCAGTCTGGCG AGCAGCAGTGAGTTGACCGTAATGCGCGCTGCCGGTGTCTCCATCGGGCGTATCGTCTGGGCGGTGATGAAGCCGATGCT GGTACTGATGCTGGCCGGTGTGCTGATCGGCGAATACGTGGCCCCAGCCACCGAAAGCATGGCCCAGGCCAACCGTTCGC TGGCGCAAGGCAGCGGCGACGCGCAAAGCGCCAAGCACGGCATGTGGCACCGCCAGGGTGACGAGTTCATTCACATCAAC TCCGTGCAACCCAACGGTCGTCTGTATGGTGTGACCCGCTATCACTTCGACAAAGAACGCCATCTGCTCAGTTCGAGCTT CGCCAAGCGCGCCGAGTTCGACACCGATCACTGGCAGCTGACCGACGTGACCACCACCAAATTTCACGAGCGCAGCACCG AAGTGGTCAATACGCCGGTCGAGCGCTGGGATGTCTCGCTGAGCCCGCAATTGCTGAGCACTGTAGTGATGGCGCCGGAA TCGCTGTCGATCACCGGTCTGTGGGGTTACATCCACTATCTGGCCGATCAGGGTCTGAGCAACGGTCGTTACTGGCTGGC ATTTTGGGTCAAGGTGTTGCAGCCGCTGGTGACCGCTGCGCTGGTACTGATGGCGATTTCCTTCATCTTCGGTCCGCTGC GTTCGGTGACCCTCGGTCAGCGGGTGTTCACCGGCGTGCTGGTGGGCTTCACCTTCCGCATCGTTCAGGATCTGCTGGGC CCATCCAGTCTGGTGTTCGGCTTCTCGCCGCTGTTCGCGGTGCTGGTGCCGGCTGGCGTGTGTGCGCTGGCGGGTGTCTG GCTGTTGCGTCGAGCCGGTTGA
Upstream 100 bases:
>100_bases GTGCATGCGATCTTCCTGACGATCGGTCTCGGTCTGTTGTACTGGGAGCCTTTGCGCCTGAAGCTGGCCAGCCGTCGCAG CGCAGCGCTGGAGGTGGCCC
Downstream 100 bases:
>100_bases TGAATAAGGTTTCACCCACGCTTTAGCTTTGAAAACGCCTCGGTCGCCAGACCGGGGCGTTTTTGCATGCAATCCGGGTG ACAGGCGAACGTGACGCTTG
Product: permease YjgP/YjgQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MVKLDRYIGSSVFIAIIAVLAIILGLATLFAFIDEMGDVSDTYTLVDVLSFVLLTAPRRLYDMLPMAALIGCLIGLGSLA SSSELTVMRAAGVSIGRIVWAVMKPMLVLMLAGVLIGEYVAPATESMAQANRSLAQGSGDAQSAKHGMWHRQGDEFIHIN SVQPNGRLYGVTRYHFDKERHLLSSSFAKRAEFDTDHWQLTDVTTTKFHERSTEVVNTPVERWDVSLSPQLLSTVVMAPE SLSITGLWGYIHYLADQGLSNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPLRSVTLGQRVFTGVLVGFTFRIVQDLLG PSSLVFGFSPLFAVLVPAGVCALAGVWLLRRAG
Sequences:
>Translated_353_residues MVKLDRYIGSSVFIAIIAVLAIILGLATLFAFIDEMGDVSDTYTLVDVLSFVLLTAPRRLYDMLPMAALIGCLIGLGSLA SSSELTVMRAAGVSIGRIVWAVMKPMLVLMLAGVLIGEYVAPATESMAQANRSLAQGSGDAQSAKHGMWHRQGDEFIHIN SVQPNGRLYGVTRYHFDKERHLLSSSFAKRAEFDTDHWQLTDVTTTKFHERSTEVVNTPVERWDVSLSPQLLSTVVMAPE SLSITGLWGYIHYLADQGLSNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPLRSVTLGQRVFTGVLVGFTFRIVQDLLG PSSLVFGFSPLFAVLVPAGVCALAGVWLLRRAG >Mature_353_residues MVKLDRYIGSSVFIAIIAVLAIILGLATLFAFIDEMGDVSDTYTLVDVLSFVLLTAPRRLYDMLPMAALIGCLIGLGSLA SSSELTVMRAAGVSIGRIVWAVMKPMLVLMLAGVLIGEYVAPATESMAQANRSLAQGSGDAQSAKHGMWHRQGDEFIHIN SVQPNGRLYGVTRYHFDKERHLLSSSFAKRAEFDTDHWQLTDVTTTKFHERSTEVVNTPVERWDVSLSPQLLSTVVMAPE SLSITGLWGYIHYLADQGLSNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPLRSVTLGQRVFTGVLVGFTFRIVQDLLG PSSLVFGFSPLFAVLVPAGVCALAGVWLLRRAG
Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptF/lptG family [H]
Homologues:
Organism=Escherichia coli, GI87082400, Length=356, Percent_Identity=38.7640449438202, Blast_Score=230, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 38555; Mature: 38555
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKLDRYIGSSVFIAIIAVLAIILGLATLFAFIDEMGDVSDTYTLVDVLSFVLLTAPRRL CCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH YDMLPMAALIGCLIGLGSLASSSELTVMRAAGVSIGRIVWAVMKPMLVLMLAGVLIGEYV HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH APATESMAQANRSLAQGSGDAQSAKHGMWHRQGDEFIHINSVQPNGRLYGVTRYHFDKER HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEHHHHCCHHH HLLSSSFAKRAEFDTDHWQLTDVTTTKFHERSTEVVNTPVERWDVSLSPQLLSTVVMAPE HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCC SLSITGLWGYIHYLADQGLSNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPLRSVTLGQ CCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVFTGVLVGFTFRIVQDLLGPSSLVFGFSPLFAVLVPAGVCALAGVWLLRRAG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKLDRYIGSSVFIAIIAVLAIILGLATLFAFIDEMGDVSDTYTLVDVLSFVLLTAPRRL CCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH YDMLPMAALIGCLIGLGSLASSSELTVMRAAGVSIGRIVWAVMKPMLVLMLAGVLIGEYV HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH APATESMAQANRSLAQGSGDAQSAKHGMWHRQGDEFIHINSVQPNGRLYGVTRYHFDKER HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEHHHHCCHHH HLLSSSFAKRAEFDTDHWQLTDVTTTKFHERSTEVVNTPVERWDVSLSPQLLSTVVMAPE HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCC SLSITGLWGYIHYLADQGLSNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPLRSVTLGQ CCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVFTGVLVGFTFRIVQDLLGPSSLVFGFSPLFAVLVPAGVCALAGVWLLRRAG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]