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The map label for this gene is lptF [H]

Identifier: 77457217

GI number: 77457217

Start: 1151097

End: 1152218

Strand: Direct

Name: lptF [H]

Synonym: Pfl01_0990

Alternate gene names: 77457217

Gene position: 1151097-1152218 (Clockwise)

Preceding gene: 77457211

Following gene: 77457218

Centisome position: 17.88

GC content: 62.21

Gene sequence:

>1122_bases
TTGATCGTCTTCCGTTATCTGTCCCGCGAAGTCCTGTTGACCCTGAGTGCGGTAAGCGCCGTGCTGCTGGTCATCATCAT
GAGCGGTCGCTTCATCAAATACCTTGCCCAGGCCGCCGCGGGCCAGCTCGATCCGGGATCGCTGTTCCTGATCATGGGCT
ATCGCCTGCCGGGCTTCATGCAGTTGATCCTGCCGCTGGGGCTGTTCCTCGGGATTCTGCTGGCGTACGGCCGGCTGTAC
CTCGAAAGCGAGATGACCGTGCTTTCGGCCACCGGCATGAGTCAGCAGCGGTTGTTCCGCATGACCCTGTTTCCGGCCAC
CCTGGTAGCTGTGGTGGTGGCCTGGCTGAGCTTGAGCCTGGCACCGCAAGGCGCCAACCAGTTCCAGCTGCTGCTGAACA
AACAGGATGCCCTGACCGAATTCGACACCCTCGAGCCGGGCCGTTTCCAGGCCTTGCGCGACGGTACGCGGGTGACCTAC
ACCGAAACCCTCAGCGATGACCGGGTCAACCTCGGCAGCGTATTCATCTCGCAGAAGAACCTCGGTGCCAACCAGAAGGA
TCGCGGGATTTCCGTGCTGGTGGCGGAGAAAGGTCGTCAGGAAGTGCGTCCCGACGGCAACCGTTACCTGATCCTCGACA
ACGGCTACCGCTACGACGGCAGCCCGGGTCAGGCCAACTATCGCGCCATCCACTACGAAACCTACGGCGTGCTGCTGCCC
AAGCCGGATGTCAGCGAGGAAGTCACCGACCGTGACGCCATGCCGACCTCGTCCCTGCTCGGCAGTGACGACATTCGCTC
GAAAACCGAACTGCAATGGCGCCTGTCGCTGCCGTTGCTGGTGTTCATCGTGACCCTGATGGCGGTGCCGCTGTCGCGGG
TCAATCCGCGTCAGGGGCGTTTCCTCAAGCTGCTGCCGGCGATTCTTCTTTATATGGCTTACCTGACCATCCTGATTGCC
GCCCGCGGCGCCCTCGAGAAAGGCAAGATTCCACCGGCGCTCGGCTTGTGGTGGGTGCATGCGATCTTCCTGACGATCGG
TCTCGGTCTGTTGTACTGGGAGCCTTTGCGCCTGAAGCTGGCCAGCCGTCGCAGCGCAGCGCTGGAGGTGGCCCGTGGTT
AA

Upstream 100 bases:

>100_bases
AGGATAATGCCGCATCTTTTTTCGACGGCTCTGCCTTGCGGGCCCGTCGATACGTTTGCTTGTTTGGCCGCCTTAGCCTG
ACAACTCTGGAGTGTCTGGT

Downstream 100 bases:

>100_bases
ACTCGACCGCTACATCGGCAGCAGCGTGTTCATCGCGATCATCGCGGTGCTGGCGATCATTCTCGGCCTGGCTACCTTGT
TTGCGTTCATCGACGAGATG

Product: permease YjgP/YjgQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAAAGQLDPGSLFLIMGYRLPGFMQLILPLGLFLGILLAYGRLY
LESEMTVLSATGMSQQRLFRMTLFPATLVAVVVAWLSLSLAPQGANQFQLLLNKQDALTEFDTLEPGRFQALRDGTRVTY
TETLSDDRVNLGSVFISQKNLGANQKDRGISVLVAEKGRQEVRPDGNRYLILDNGYRYDGSPGQANYRAIHYETYGVLLP
KPDVSEEVTDRDAMPTSSLLGSDDIRSKTELQWRLSLPLLVFIVTLMAVPLSRVNPRQGRFLKLLPAILLYMAYLTILIA
ARGALEKGKIPPALGLWWVHAIFLTIGLGLLYWEPLRLKLASRRSAALEVARG

Sequences:

>Translated_373_residues
MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAAAGQLDPGSLFLIMGYRLPGFMQLILPLGLFLGILLAYGRLY
LESEMTVLSATGMSQQRLFRMTLFPATLVAVVVAWLSLSLAPQGANQFQLLLNKQDALTEFDTLEPGRFQALRDGTRVTY
TETLSDDRVNLGSVFISQKNLGANQKDRGISVLVAEKGRQEVRPDGNRYLILDNGYRYDGSPGQANYRAIHYETYGVLLP
KPDVSEEVTDRDAMPTSSLLGSDDIRSKTELQWRLSLPLLVFIVTLMAVPLSRVNPRQGRFLKLLPAILLYMAYLTILIA
ARGALEKGKIPPALGLWWVHAIFLTIGLGLLYWEPLRLKLASRRSAALEVARG
>Mature_373_residues
MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAAAGQLDPGSLFLIMGYRLPGFMQLILPLGLFLGILLAYGRLY
LESEMTVLSATGMSQQRLFRMTLFPATLVAVVVAWLSLSLAPQGANQFQLLLNKQDALTEFDTLEPGRFQALRDGTRVTY
TETLSDDRVNLGSVFISQKNLGANQKDRGISVLVAEKGRQEVRPDGNRYLILDNGYRYDGSPGQANYRAIHYETYGVLLP
KPDVSEEVTDRDAMPTSSLLGSDDIRSKTELQWRLSLPLLVFIVTLMAVPLSRVNPRQGRFLKLLPAILLYMAYLTILIA
ARGALEKGKIPPALGLWWVHAIFLTIGLGLLYWEPLRLKLASRRSAALEVARG

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=371, Percent_Identity=32.8840970350404, Blast_Score=172, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 41477; Mature: 41477

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAAAGQLDPGSLFLIMGYRLPGFM
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH
QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLFRMTLFPATLVAVVVAWLSLSL
HHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
APQGANQFQLLLNKQDALTEFDTLEPGRFQALRDGTRVTYTETLSDDRVNLGSVFISQKN
CCCCCCHHHEEECCCHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCCCCHHHEEEECCC
LGANQKDRGISVLVAEKGRQEVRPDGNRYLILDNGYRYDGSPGQANYRAIHYETYGVLLP
CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCEEEEEEEEEEEEEC
KPDVSEEVTDRDAMPTSSLLGSDDIRSKTELQWRLSLPLLVFIVTLMAVPLSRVNPRQGR
CCCCCHHHHCCCCCCCHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHCCCCCCCH
FLKLLPAILLYMAYLTILIAARGALEKGKIPPALGLWWVHAIFLTIGLGLLYWEPLRLKL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRRSAALEVARG
HHHHHHHHHCCCC
>Mature Secondary Structure
MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAAAGQLDPGSLFLIMGYRLPGFM
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH
QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLFRMTLFPATLVAVVVAWLSLSL
HHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
APQGANQFQLLLNKQDALTEFDTLEPGRFQALRDGTRVTYTETLSDDRVNLGSVFISQKN
CCCCCCHHHEEECCCHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCCCCHHHEEEECCC
LGANQKDRGISVLVAEKGRQEVRPDGNRYLILDNGYRYDGSPGQANYRAIHYETYGVLLP
CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCEEEEEEEEEEEEEC
KPDVSEEVTDRDAMPTSSLLGSDDIRSKTELQWRLSLPLLVFIVTLMAVPLSRVNPRQGR
CCCCCHHHHCCCCCCCHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHCCCCCCCH
FLKLLPAILLYMAYLTILIAARGALEKGKIPPALGLWWVHAIFLTIGLGLLYWEPLRLKL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRRSAALEVARG
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]