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The map label for this gene is yhdX [H]

Identifier: 77457201

GI number: 77457201

Start: 1134541

End: 1135722

Strand: Direct

Name: yhdX [H]

Synonym: Pfl01_0974

Alternate gene names: 77457201

Gene position: 1134541-1135722 (Clockwise)

Preceding gene: 77457200

Following gene: 77457202

Centisome position: 17.62

GC content: 60.24

Gene sequence:

>1182_bases
ATGCAAAATTCAATCGGCGCACCAAAGCAGAGGCTCAGCCTCAGCGATCCACGAGTGCGTGCGTGGGTATTTCAGATCAT
CACCATCGTGGCGGTGGTCTCCCTGGGCTGGTATCTGTTCGATAACACCCAGACCAACCTGCAACACCGGGGTATCACTT
CGGGGTTCGACTTTCTCGAGCGCAGTGCCGGGTTCGGCATCGCTCAACACCTGATCTCCTACACCGAAGCGGACAGTTAT
GCCCGGGTTTTCGTCATCGGCCTGCTCAACACGCTGCTGGTGACGTTCATCGGTGTGATCCTGGCCACGATCCTCGGCTT
CATCGTCGGCGTGGCACGTCTGTCGAAGAACTGGATCATTTCCAAACTGGCAACGGTGTACGTGGAGGTTTTCCGTAACA
TCCCGCCACTGCTGCAGATCCTGTTCTGGTACTTCGCGGTGTTCCTGACCATGCCGGGGCCGCGCAACAGCCACAACTTC
GGCGATACCTTCTTCGTCAGCAGCCGTGGCCTGAACATGCCGGCCGCGCAAATGGCCGACGGCTTCTGGGCGTTCGTGGT
CAGCATCGTGGTGGCCATCGTCGCCATCGTGCTGATGAGCCGCTGGGCCAACAAGCGCTTTGAGGCCACTGGCGAGCCAT
TCCACAAGTTCTGGGCAGGCCTGGCGCTGTTCCTGGTGATCCCGGCGCTGTGCGCGCTGATCTTCGGTGCACCTGTGCAC
TGGGAAATGCCGAAGCTGCAAGGCTTCAACTTCGTCGGTGGCTGGGTGCTGATTCCGGAACTGCTGGCCTTGACCCTGGC
GTTGACGGTGTACACCGCAGCGTTCATCGCCGAGATCGTGCGTTCGGGCATCAAGTCGGTCAGCCATGGCCAGACCGAGG
CGGCGCATTCGCTCGGCCTGCGCAACGGCCCGACCCTGCGCAAGGTGATCATTCCGCAAGCGCTGCGGGTCATCATCCCG
CCGCTGACCAGCCAATACCTGAACCTGGCGAAGAACTCCTCGCTGGCGGCCGGTATCGGTTATCCGGAGATGGTTTCGCT
GTTCGCCGGCACCGTGCTGAACCAGACCGGTCAGGCGATCGAAGTCATTGCCATCACCATGAGCGTGTACCTGGCGATCA
GTATCAGCATTTCCCTGCTGATGAACTGGTACAACAAGCGCATCGCGCTGATCGAGCGGTAA

Upstream 100 bases:

>100_bases
ACGGCGGCATTCAATACGCACCACCAGTGCGCTGATGGTTCTGTCACCCGGCAGGCCAACTGCCGGGTGACGTTCTGTTC
CATTATTTCCGGGGCACTTC

Downstream 100 bases:

>100_bases
GGAATAGCGCATGAGTACTCATACTTTCAAACCCGATATGCCACCGCCGGCCAAGGTCTTCGGCCCGATGGCGTGGATCC
GCGCGAACATGTTCTCCAGC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MQNSIGAPKQRLSLSDPRVRAWVFQIITIVAVVSLGWYLFDNTQTNLQHRGITSGFDFLERSAGFGIAQHLISYTEADSY
ARVFVIGLLNTLLVTFIGVILATILGFIVGVARLSKNWIISKLATVYVEVFRNIPPLLQILFWYFAVFLTMPGPRNSHNF
GDTFFVSSRGLNMPAAQMADGFWAFVVSIVVAIVAIVLMSRWANKRFEATGEPFHKFWAGLALFLVIPALCALIFGAPVH
WEMPKLQGFNFVGGWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAAHSLGLRNGPTLRKVIIPQALRVIIP
PLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISLLMNWYNKRIALIER

Sequences:

>Translated_393_residues
MQNSIGAPKQRLSLSDPRVRAWVFQIITIVAVVSLGWYLFDNTQTNLQHRGITSGFDFLERSAGFGIAQHLISYTEADSY
ARVFVIGLLNTLLVTFIGVILATILGFIVGVARLSKNWIISKLATVYVEVFRNIPPLLQILFWYFAVFLTMPGPRNSHNF
GDTFFVSSRGLNMPAAQMADGFWAFVVSIVVAIVAIVLMSRWANKRFEATGEPFHKFWAGLALFLVIPALCALIFGAPVH
WEMPKLQGFNFVGGWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAAHSLGLRNGPTLRKVIIPQALRVIIP
PLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISLLMNWYNKRIALIER
>Mature_393_residues
MQNSIGAPKQRLSLSDPRVRAWVFQIITIVAVVSLGWYLFDNTQTNLQHRGITSGFDFLERSAGFGIAQHLISYTEADSY
ARVFVIGLLNTLLVTFIGVILATILGFIVGVARLSKNWIISKLATVYVEVFRNIPPLLQILFWYFAVFLTMPGPRNSHNF
GDTFFVSSRGLNMPAAQMADGFWAFVVSIVVAIVAIVLMSRWANKRFEATGEPFHKFWAGLALFLVIPALCALIFGAPVH
WEMPKLQGFNFVGGWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAAHSLGLRNGPTLRKVIIPQALRVIIP
PLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISLLMNWYNKRIALIER

Specific function: Probably part of the binding-protein-dependent transport system ydhWXYZ for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4597

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI48994930, Length=386, Percent_Identity=61.9170984455959, Blast_Score=472, Evalue=1e-134,
Organism=Escherichia coli, GI1786874, Length=168, Percent_Identity=34.5238095238095, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786873, Length=130, Percent_Identity=33.0769230769231, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788226, Length=131, Percent_Identity=36.6412213740458, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787030, Length=129, Percent_Identity=30.2325581395349, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI87082239, Length=132, Percent_Identity=30.3030303030303, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 43304; Mature: 43304

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNSIGAPKQRLSLSDPRVRAWVFQIITIVAVVSLGWYLFDNTQTNLQHRGITSGFDFLE
CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHH
RSAGFGIAQHLISYTEADSYARVFVIGLLNTLLVTFIGVILATILGFIVGVARLSKNWII
HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKLATVYVEVFRNIPPLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAAQMAD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH
GFWAFVVSIVVAIVAIVLMSRWANKRFEATGEPFHKFWAGLALFLVIPALCALIFGAPVH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WEMPKLQGFNFVGGWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAAHSLGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
RNGPTLRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAI
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
EVIAITMSVYLAISISISLLMNWYNKRIALIER
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MQNSIGAPKQRLSLSDPRVRAWVFQIITIVAVVSLGWYLFDNTQTNLQHRGITSGFDFLE
CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHH
RSAGFGIAQHLISYTEADSYARVFVIGLLNTLLVTFIGVILATILGFIVGVARLSKNWII
HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKLATVYVEVFRNIPPLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAAQMAD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH
GFWAFVVSIVVAIVAIVLMSRWANKRFEATGEPFHKFWAGLALFLVIPALCALIFGAPVH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WEMPKLQGFNFVGGWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAAHSLGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
RNGPTLRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAI
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
EVIAITMSVYLAISISISLLMNWYNKRIALIER
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]