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The map label for this gene is yhdW [H]

Identifier: 77457200

GI number: 77457200

Start: 1133444

End: 1134475

Strand: Direct

Name: yhdW [H]

Synonym: Pfl01_0973

Alternate gene names: 77457200

Gene position: 1133444-1134475 (Clockwise)

Preceding gene: 77457194

Following gene: 77457201

Centisome position: 17.6

GC content: 59.4

Gene sequence:

>1032_bases
ATGAAGATGTTGAAATCCACGCTGGCGATCGTGACTGCTGCTGCAGTACTGGGTGTCAGCGGGTTCGCTCAGGCGGGTGC
AACCCTGGATGCAGTGAAGAAGAAAGGATTCGTGCAGTGCGGCGTCAGCGATGGCTTGCCAGGCTTCTCGGTTCCGGATT
CCACCGGCAAGATCGTGGGTATCGATGCTGACGTCTGCCGCGCCGTGGCCGCTGCCGTGTTCGGCGACGCGACCAAGGTC
AAGTTCAGTCAGCTGAACGCCAAGGAGCGTTTCACCGCGCTGCAGTCGGGCGAGATCGACATTCTGTCGCGCAACACCAC
CATGACCAGCTCCCGTGACGCGGGCATGGGCCTGAAATTCCCGGGCTTCATTACCTACTACGACGGCATTGGCTTCCTGG
TAAACAACAAGCTGGGCGTGAAGAGTGCCAAAGAGCTGGACGGTGCAACCATCTGCATCCAGGCCGGTACCACCACCGAG
CTGAACGTTTCCGACTACTTCCGCGGCAACGGTCTGAAATACACCCCGATCACTTTCGACACCTCCGATGAAAGCGCCAA
GTCGCTGGAATCCGGTCGTTGCGACGTGCTGACCTCCGACAAGTCCCAGCTGTTCGCCCAGCGCAGCAAGCTGGCTTCGC
CGAAGGACTACGTGGTTCTGCCGGAAACCATTTCCAAGGAACCCCTGGGCCCGGTCGTGCGTAACGGCGACGACGAGTGG
CTGGCCATCGTGCGTTGGGTTGGCTACGCGCTGCTGAACACCGAAGAAGCCGGCATCTCTTCGAAGAACGTCGAAGCTGA
AGCCAAATCCACCAAGAACCCGGATGTCGCTCGTATGCTCGGCGCAGACGGCGAATACGGCAAAGACCTGAAACTGCCGA
AGGACTGGGTCGTACAGATCGTCAAGCAAGTCGGCAACTACGGCGAAATCTTCGAGAAAAACCTCGGCAAGAGCACTCCG
CTGGAAATCGACCGCGGCCTGAACGCGCTGTGGAACAACGGCGGCATTCAATACGCACCACCAGTGCGCTGA

Upstream 100 bases:

>100_bases
TCGGTTGACCCCAAAAAAAGCCAACACGGGTCAACAACGCCTCAAAAGGGTGCGACTGGACTCAAGCTCCGACACAACAA
GAGCAAAACTGGAGGTTTGA

Downstream 100 bases:

>100_bases
TGGTTCTGTCACCCGGCAGGCCAACTGCCGGGTGACGTTCTGTTCCATTATTTCCGGGGCACTTCATGCAAAATTCAATC
GGCGCACCAAAGCAGAGGCT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKMLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDSTGKIVGIDADVCRAVAAAVFGDATKV
KFSQLNAKERFTALQSGEIDILSRNTTMTSSRDAGMGLKFPGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTE
LNVSDYFRGNGLKYTPITFDTSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW
LAIVRWVGYALLNTEEAGISSKNVEAEAKSTKNPDVARMLGADGEYGKDLKLPKDWVVQIVKQVGNYGEIFEKNLGKSTP
LEIDRGLNALWNNGGIQYAPPVR

Sequences:

>Translated_343_residues
MKMLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDSTGKIVGIDADVCRAVAAAVFGDATKV
KFSQLNAKERFTALQSGEIDILSRNTTMTSSRDAGMGLKFPGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTE
LNVSDYFRGNGLKYTPITFDTSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW
LAIVRWVGYALLNTEEAGISSKNVEAEAKSTKNPDVARMLGADGEYGKDLKLPKDWVVQIVKQVGNYGEIFEKNLGKSTP
LEIDRGLNALWNNGGIQYAPPVR
>Mature_343_residues
MKMLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDSTGKIVGIDADVCRAVAAAVFGDATKV
KFSQLNAKERFTALQSGEIDILSRNTTMTSSRDAGMGLKFPGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTE
LNVSDYFRGNGLKYTPITFDTSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW
LAIVRWVGYALLNTEEAGISSKNVEAEAKSTKNPDVARMLGADGEYGKDLKLPKDWVVQIVKQVGNYGEIFEKNLGKSTP
LEIDRGLNALWNNGGIQYAPPVR

Specific function: Probably part of the binding-protein-dependent transport system ydhWXYZ for an amino acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=223, Percent_Identity=24.2152466367713, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36640; Mature: 36640

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDSTGKIVG
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEE
IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTMTSSRDAGMGLKF
ECHHHHHHHHHHHHCCCCEEEHHHCCHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCC
PGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFD
CCEEEEECCEEEEEECCCCCCCHHHCCCEEEEEECCCCEEECHHHHHCCCCEEECEEEEC
TSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW
CCCHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCEEEECHHCCCCCCCHHHHCCCHHH
LAIVRWVGYALLNTEEAGISSKNVEAEAKSTKNPDVARMLGADGEYGKDLKLPKDWVVQI
HHHHHHHHHHHCCCHHCCCCCCCCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHH
VKQVGNYGEIFEKNLGKSTPLEIDRGLNALWNNGGIQYAPPVR
HHHHCCHHHHHHHHCCCCCCCCHHHCCHHHCCCCCEEECCCCC
>Mature Secondary Structure
MKMLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDSTGKIVG
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEE
IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTMTSSRDAGMGLKF
ECHHHHHHHHHHHHCCCCEEEHHHCCHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCC
PGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFD
CCEEEEECCEEEEEECCCCCCCHHHCCCEEEEEECCCCEEECHHHHHCCCCEEECEEEEC
TSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW
CCCHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCEEEECHHCCCCCCCHHHHCCCHHH
LAIVRWVGYALLNTEEAGISSKNVEAEAKSTKNPDVARMLGADGEYGKDLKLPKDWVVQI
HHHHHHHHHHHCCCHHCCCCCCCCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHH
VKQVGNYGEIFEKNLGKSTPLEIDRGLNALWNNGGIQYAPPVR
HHHHCCHHHHHHHHCCCCCCCCHHHCCHHHCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]