| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is argT [H]
Identifier: 77457194
GI number: 77457194
Start: 1126985
End: 1127761
Strand: Direct
Name: argT [H]
Synonym: Pfl01_0967
Alternate gene names: 77457194
Gene position: 1126985-1127761 (Clockwise)
Preceding gene: 77457193
Following gene: 77457200
Centisome position: 17.5
GC content: 58.43
Gene sequence:
>777_bases ATGAAGAAATTCCCCCTCATTACCGGTCTGGCGCTGAGCCTGTTGGCGTGCAGCAGCGCGTTCGCCGCCGAGAAAACCCT GCGTATCGGTATCGAAGCGGCGTATCCGCCCTTCGCCTCGAAAACCGACAAGGGTGAAATCGTCGGTTTTGACTACGACA TCGGCAATGCCCTGTGCGCGCAAATGCAGGTCAAGTGCGTGTGGGTCGAGGGTGAGTTCGACGGTCTGATTCCTTCCCTG AAAGTGAAGAAAATCGACATGGCGCTGTCGTCCATGACCATCAATGAAGACCGCAAGAAGTCGGTGGACTTCACCCACAA GTACTATTTCACCTCGTCGCGGCTGGTGATGAAGGAGGGCGCGAGCGTCGATGACCAGTACGCCAGCCTCAAGGGCAAAA CCGTCGGCGTGCAGCGTGCGACCACCACCGACCGTTACGCCACCGAGGTGTTCGAGCCCAAGGGCATCAACGTCAAGCGT TACGGCAACAACGAAGAAATCTACATGGACCTGGCGGCCGGGCGTCTCGATGCGATCTTCGCCGACACCATCCCGTTGAC CGACTTCCTGTCGATGCCGCGCGGCAAGGGTTACGCGTTTGTCGGGCCTGAGCTGAAGGATCCGAAGTACGTGGGCGAGG GCGCGGGGATTGCGGTGCGCAAGGGCAACACAGAACTGGTCAGCCAGTTGAACACTGCCATCGACGGTATTCGCGCCAGT GGCGAGTACCAGAAGATTTCCGAGAAGTACTTCAAGTCCGATATCTACGGCGACTGA
Upstream 100 bases:
>100_bases AAAAGTCCAGTATGGATTTACAAGTACAAAAAAGGCCTGTTCCCGTTTCAGCTTTTTCTTCTGTCTTGCCAAACCAACAA CAACCCGCGAGAGAACGAAC
Downstream 100 bases:
>100_bases ATCTGAAAACCGTGCAGCCTTCGCAGGCTGCACGGTTTCAGCCCTTCAATTCCTTCAAATGCTTGTACACCGTGGCCCGC CCCATGTTCAGTACATTGGC
Product: lysine-arginine-ornithine-binding periplasmic protein
Products: ADP; phosphate; L-ornithine [Cytoplasm]; ADP; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: LAO-binding protein [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKKFPLITGLALSLLACSSAFAAEKTLRIGIEAAYPPFASKTDKGEIVGFDYDIGNALCAQMQVKCVWVEGEFDGLIPSL KVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEGASVDDQYASLKGKTVGVQRATTTDRYATEVFEPKGINVKR YGNNEEIYMDLAAGRLDAIFADTIPLTDFLSMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVSQLNTAIDGIRAS GEYQKISEKYFKSDIYGD
Sequences:
>Translated_258_residues MKKFPLITGLALSLLACSSAFAAEKTLRIGIEAAYPPFASKTDKGEIVGFDYDIGNALCAQMQVKCVWVEGEFDGLIPSL KVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEGASVDDQYASLKGKTVGVQRATTTDRYATEVFEPKGINVKR YGNNEEIYMDLAAGRLDAIFADTIPLTDFLSMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVSQLNTAIDGIRAS GEYQKISEKYFKSDIYGD >Mature_258_residues MKKFPLITGLALSLLACSSAFAAEKTLRIGIEAAYPPFASKTDKGEIVGFDYDIGNALCAQMQVKCVWVEGEFDGLIPSL KVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEGASVDDQYASLKGKTVGVQRATTTDRYATEVFEPKGINVKR YGNNEEIYMDLAAGRLDAIFADTIPLTDFLSMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVSQLNTAIDGIRAS GEYQKISEKYFKSDIYGD
Specific function: This periplasmic binding protein is involved in an arginine transport system. ArgT and histidine-binding protein J (hisJ) interact with a common membrane-bound receptor, hisP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788649, Length=260, Percent_Identity=45, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1788648, Length=234, Percent_Identity=44.4444444444444, Blast_Score=211, Evalue=3e-56, Organism=Escherichia coli, GI1787085, Length=245, Percent_Identity=39.5918367346939, Blast_Score=171, Evalue=4e-44, Organism=Escherichia coli, GI1787088, Length=250, Percent_Identity=40.4, Blast_Score=166, Evalue=1e-42, Organism=Escherichia coli, GI1788228, Length=239, Percent_Identity=31.3807531380753, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1787031, Length=252, Percent_Identity=32.1428571428571, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1786876, Length=241, Percent_Identity=24.896265560166, Blast_Score=67, Evalue=9e-13,
Paralogues:
None
Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28349; Mature: 28349
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFPLITGLALSLLACSSAFAAEKTLRIGIEAAYPPFASKTDKGEIVGFDYDIGNALCA CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHEE QMQVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEG EEEEEEEEEECCCCCCCCCCEEEHHHHHHHHEECCCCHHCCCCEEEEEEEECCEEEEECC ASVDDQYASLKGKTVGVQRATTTDRYATEVFEPKGINVKRYGNNEEIYMDLAAGRLDAIF CCCCHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCEEEEECCCCEEEEEECCCCEEEEE ADTIPLTDFLSMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVSQLNTAIDGIRAS ECCCCHHHHHCCCCCCCEEEECCCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHHHCCC GEYQKISEKYFKSDIYGD CCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKFPLITGLALSLLACSSAFAAEKTLRIGIEAAYPPFASKTDKGEIVGFDYDIGNALCA CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHEE QMQVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEG EEEEEEEEEECCCCCCCCCCEEEHHHHHHHHEECCCCHHCCCCEEEEEEEECCEEEEECC ASVDDQYASLKGKTVGVQRATTTDRYATEVFEPKGINVKRYGNNEEIYMDLAAGRLDAIF CCCCHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCEEEEECCCCEEEEEECCCCEEEEE ADTIPLTDFLSMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVSQLNTAIDGIRAS ECCCCHHHHHCCCCCCCEEEECCCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHHHCCC GEYQKISEKYFKSDIYGD CCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-ornithine [Periplasm]; H2O; ATP; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [Periplasm] + H2O = ADP + phosphate + L-lysine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 3040734; 9298646 [H]