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The map label for this gene is algK [H]

Identifier: 77457184

GI number: 77457184

Start: 1115433

End: 1116839

Strand: Reverse

Name: algK [H]

Synonym: Pfl01_0957

Alternate gene names: 77457184

Gene position: 1116839-1115433 (Counterclockwise)

Preceding gene: 77457185

Following gene: 77457183

Centisome position: 17.35

GC content: 63.82

Gene sequence:

>1407_bases
ATGCCCGTGACGAGCCCTATCAGAATCCTGCCGGTCCCGCTGACCCTGGCCATGGCAATCGCCCTGGCCGGTTGCGCCGG
CCTGCCCGACCAGCGTCTGGCCAACGAAGCGCTCAAGCGCGGTGACACCGCAACCGCCGCGCAAAACTACCGTGCGCTGG
CCGATCTGGGTTACAGCGAAGCCCAAGTGGGTCTCGCCGATATTCAGGTCGACAGCCGCGACCCGGAACAGATGAAACAG
GCCGAAGCCACCTACCGCGCCGCTGCCAGTGTTTCGCCGCGTGCCCAGGCCCGACTCGGTCGTTTGCTGGTGGCCAAGCC
CGGCTCCACCGAAGCCGAGCATCAGGAAGCCGAAAGCCTGCTGAAGAAAGCCGCCGCCAGTGGCGAAGGCAACACGCTGA
TCCCGCTCGCGATGCTGTACCTGCAATTCCCGCACAGCTTCCCGAACATCAACGCCCAGCAGCAGATCGATCAATGGCGC
AAATCCGGTTACCCGGAAGCCGGTCTCGCTCAGGTGCTGCTGTATCGCACCCAGGGCACTTACGACCAGCATCTGGATGA
CGTGGAAAAGATCTGCAAGGCCGCGCTCAACACCACCGACATCTGCTACGTCGAGCTGGCCACGGTCTATCAGAAACGTG
GCGCGCCGGAGCAACAGGCCGAGCTGATCAAACAACTGCAGGCCGGTTACAGCCGTGGCACCGTCAGTGCTCAGCGGGTG
GATTCGGTGGCCCGTGTGCTGGCCGATTCGACCCTGGGCAAGACCGACGAAAAAACCGCGCAGTCGCTGCTTGAGCCGAT
CGCTCCGGGTTATCCGGCCTCGTGGGTCACCCTCGCGCAGCTGCTGTATGACTTCCCGGAACTGGGCGACATCGACCAGA
TGATGAAATACCTGGACAACGGCCGCGCCGCCGACCAGCCGCGCGCCGAGCTGTTGCTGGGCAAGCTCTACTACGAAGGC
AAACTGGTCCCGGCCGACGCGAAAGTCGCCGAGGAACATTTCCAGAAAGCCGTCGGCCGCGAAGTCGCTGCCGACTACTA
CCTCGGCCAGATCTACCGCCGTGGCTACCTGGGCAAGGTCTATCCGCAGAAGGCCCTCGACCATCTGCTGACCGCTGCGC
GCAACGGCCAGAACAGCGCCGACTTCGCCATCGCCCAGCTGTTTTCCCAAGGCAAGGGCACCAAGCCCGACCCGGTCAAC
GCCTACGTGTTCAGCCAGTTGGCCAAAGCACAAAACACCCCGCAAGCCGATGAGCTGGCGACCACCCTCGCCGCCCATCT
GCCGCCCGAGCGCCTGGCCGAAGCCCAGCGCCTGCTGCAACAGGAACAGGCGACCCGTGGCGCCCTGAACCAGAACACGC
TGCAACTGCACGCCCTGCAAGAAGAAGACGGCGAGGAAAAATTATGA

Upstream 100 bases:

>100_bases
CCGCTTCGCCGGCCGCCCGGTGGAGGTGAACAGCGACCGCGGTCCGAACCTGAACTGGCTGATCGACAAAGCCATGGCAG
CCGGTCTTTAAGTCGAGGAC

Downstream 100 bases:

>100_bases
AATTGAATCCCTTTGTGAAGGCCGGCATTGGCCTCACGTTCGCGCTGATCTGGTCTTGCCCGACCCTGGCCGCGATGACG
GAATCGAAAAACTTCGGCCT

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MPVTSPIRILPVPLTLAMAIALAGCAGLPDQRLANEALKRGDTATAAQNYRALADLGYSEAQVGLADIQVDSRDPEQMKQ
AEATYRAAASVSPRAQARLGRLLVAKPGSTEAEHQEAESLLKKAAASGEGNTLIPLAMLYLQFPHSFPNINAQQQIDQWR
KSGYPEAGLAQVLLYRTQGTYDQHLDDVEKICKAALNTTDICYVELATVYQKRGAPEQQAELIKQLQAGYSRGTVSAQRV
DSVARVLADSTLGKTDEKTAQSLLEPIAPGYPASWVTLAQLLYDFPELGDIDQMMKYLDNGRAADQPRAELLLGKLYYEG
KLVPADAKVAEEHFQKAVGREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPVN
AYVFSQLAKAQNTPQADELATTLAAHLPPERLAEAQRLLQQEQATRGALNQNTLQLHALQEEDGEEKL

Sequences:

>Translated_468_residues
MPVTSPIRILPVPLTLAMAIALAGCAGLPDQRLANEALKRGDTATAAQNYRALADLGYSEAQVGLADIQVDSRDPEQMKQ
AEATYRAAASVSPRAQARLGRLLVAKPGSTEAEHQEAESLLKKAAASGEGNTLIPLAMLYLQFPHSFPNINAQQQIDQWR
KSGYPEAGLAQVLLYRTQGTYDQHLDDVEKICKAALNTTDICYVELATVYQKRGAPEQQAELIKQLQAGYSRGTVSAQRV
DSVARVLADSTLGKTDEKTAQSLLEPIAPGYPASWVTLAQLLYDFPELGDIDQMMKYLDNGRAADQPRAELLLGKLYYEG
KLVPADAKVAEEHFQKAVGREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPVN
AYVFSQLAKAQNTPQADELATTLAAHLPPERLAEAQRLLQQEQATRGALNQNTLQLHALQEEDGEEKL
>Mature_467_residues
PVTSPIRILPVPLTLAMAIALAGCAGLPDQRLANEALKRGDTATAAQNYRALADLGYSEAQVGLADIQVDSRDPEQMKQA
EATYRAAASVSPRAQARLGRLLVAKPGSTEAEHQEAESLLKKAAASGEGNTLIPLAMLYLQFPHSFPNINAQQQIDQWRK
SGYPEAGLAQVLLYRTQGTYDQHLDDVEKICKAALNTTDICYVELATVYQKRGAPEQQAELIKQLQAGYSRGTVSAQRVD
SVARVLADSTLGKTDEKTAQSLLEPIAPGYPASWVTLAQLLYDFPELGDIDQMMKYLDNGRAADQPRAELLLGKLYYEGK
LVPADAKVAEEHFQKAVGREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPVNA
YVFSQLAKAQNTPQADELATTLAAHLPPERLAEAQRLLQQEQATRGALNQNTLQLHALQEEDGEEKL

Specific function: May be involved in the polymerization of mannuronate to alginate [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AlgK family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 51040; Mature: 50909

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTSPIRILPVPLTLAMAIALAGCAGLPDQRLANEALKRGDTATAAQNYRALADLGYSE
CCCCCCCEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH
AQVGLADIQVDSRDPEQMKQAEATYRAAASVSPRAQARLGRLLVAKPGSTEAEHQEAESL
HHCCHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCCCCCHHHHHHHHH
LKKAAASGEGNTLIPLAMLYLQFPHSFPNINAQQQIDQWRKSGYPEAGLAQVLLYRTQGT
HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
YDQHLDDVEKICKAALNTTDICYVELATVYQKRGAPEQQAELIKQLQAGYSRGTVSAQRV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHH
DSVARVLADSTLGKTDEKTAQSLLEPIAPGYPASWVTLAQLLYDFPELGDIDQMMKYLDN
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHC
GRAADQPRAELLLGKLYYEGKLVPADAKVAEEHFQKAVGREVAADYYLGQIYRRGYLGKV
CCCCCCCHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPVNAYVFSQLAKAQNTPQADELA
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
TTLAAHLPPERLAEAQRLLQQEQATRGALNQNTLQLHALQEEDGEEKL
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
PVTSPIRILPVPLTLAMAIALAGCAGLPDQRLANEALKRGDTATAAQNYRALADLGYSE
CCCCCCEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH
AQVGLADIQVDSRDPEQMKQAEATYRAAASVSPRAQARLGRLLVAKPGSTEAEHQEAESL
HHCCHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCCCCCHHHHHHHHH
LKKAAASGEGNTLIPLAMLYLQFPHSFPNINAQQQIDQWRKSGYPEAGLAQVLLYRTQGT
HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
YDQHLDDVEKICKAALNTTDICYVELATVYQKRGAPEQQAELIKQLQAGYSRGTVSAQRV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHH
DSVARVLADSTLGKTDEKTAQSLLEPIAPGYPASWVTLAQLLYDFPELGDIDQMMKYLDN
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHC
GRAADQPRAELLLGKLYYEGKLVPADAKVAEEHFQKAVGREVAADYYLGQIYRRGYLGKV
CCCCCCCHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPVNAYVFSQLAKAQNTPQADELA
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
TTLAAHLPPERLAEAQRLLQQEQATRGALNQNTLQLHALQEEDGEEKL
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]