| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is folM [H]
Identifier: 77457119
GI number: 77457119
Start: 1037495
End: 1038205
Strand: Reverse
Name: folM [H]
Synonym: Pfl01_0892
Alternate gene names: 77457119
Gene position: 1038205-1037495 (Counterclockwise)
Preceding gene: 77457120
Following gene: 77457118
Centisome position: 16.13
GC content: 61.74
Gene sequence:
>711_bases ATGACTTCTCCCACCGCTCCCATCCTTATCACCGGCGCCGGCCAGCGGGTCGGCCTGCATTGTGCGCAGCGTCTGCTGGA AGATGGTCATCGGGTGATCTTCACTTACCGCAGCGAACGGCCGGGTGTGAAGACCTTGCGGGATCTGGGCGCCCTAGGGC TGCACGCGGACTTTTCCAGCGAAGCTTCGATCCTCGCCTTCATCACCGAGCTGAAGTCACACACCGACAGCCTGCGCGCG ATCGTGCACAACGCCTCGGAGTGGCTGGCGGAAACCGCTGACGGCGAAGCCGAAGCCTTCAGCCGCATGTTCAACATTCA CATGCTGGCGCCGTACCTGATCAATCTGCATTGCGCTGAATTGCTGCAACGTTCGAGTCCTGCCGACATCATCCACATCA GCGATGACGTCACCCGCAAGGGCAGCAGCAAACACATCGGCTATTGCGCCAGCAAGGCCGGGCTCGACAGTCTCACGCTG TCCTTCGCCGCGCGCTACGCGCCGTCAATCAAGGTCAACGGCATCGCACCGGCCCTGCTATTGTTCAATCCCGACGACGA CGCGGAGTACCGTGCCAAGGCGCTGGCCAAGTCCGCGCTGGGCATCGAACCCGGCAGCGAAGTGATTTATCAGAGCCTGC GTTATCTGCTCGACAACCCGTATGTCACCGGCACCACCCTGACCGTCAACGGCGGGCGGCACGTCAAGTAA
Upstream 100 bases:
>100_bases CTGCACGCCCGCTGCCTGCCGCACCCTCCACGCAAAATCGCTGAAACCGTCGCTCGCGTCGCTGTTATAGTTTTTGCTCT GACTTCGACGCGAGCCGTAC
Downstream 100 bases:
>100_bases TACGCCCCCGCGAGGATGCTCCATGACCCGTTCCCTGCCCGAGAATTACCGCGAGATCCTGATCGGCCTCGGTGAAGATC CCGACCGTGAAGGCTTGCTC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: DHFR [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTSPTAPILITGAGQRVGLHCAQRLLEDGHRVIFTYRSERPGVKTLRDLGALGLHADFSSEASILAFITELKSHTDSLRA IVHNASEWLAETADGEAEAFSRMFNIHMLAPYLINLHCAELLQRSSPADIIHISDDVTRKGSSKHIGYCASKAGLDSLTL SFAARYAPSIKVNGIAPALLLFNPDDDAEYRAKALAKSALGIEPGSEVIYQSLRYLLDNPYVTGTTLTVNGGRHVK
Sequences:
>Translated_236_residues MTSPTAPILITGAGQRVGLHCAQRLLEDGHRVIFTYRSERPGVKTLRDLGALGLHADFSSEASILAFITELKSHTDSLRA IVHNASEWLAETADGEAEAFSRMFNIHMLAPYLINLHCAELLQRSSPADIIHISDDVTRKGSSKHIGYCASKAGLDSLTL SFAARYAPSIKVNGIAPALLLFNPDDDAEYRAKALAKSALGIEPGSEVIYQSLRYLLDNPYVTGTTLTVNGGRHVK >Mature_235_residues TSPTAPILITGAGQRVGLHCAQRLLEDGHRVIFTYRSERPGVKTLRDLGALGLHADFSSEASILAFITELKSHTDSLRAI VHNASEWLAETADGEAEAFSRMFNIHMLAPYLINLHCAELLQRSSPADIIHISDDVTRKGSSKHIGYCASKAGLDSLTLS FAARYAPSIKVNGIAPALLLFNPDDDAEYRAKALAKSALGIEPGSEVIYQSLRYLLDNPYVTGTTLTVNGGRHVK
Specific function: Catalyzes the reduction of dihydrofolate to tetrahydrofolate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FolM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787891, Length=234, Percent_Identity=45.2991452991453, Blast_Score=201, Evalue=3e-53, Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=25.2032520325203, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787335, Length=242, Percent_Identity=27.6859504132231, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 25570; Mature: 25439
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPTAPILITGAGQRVGLHCAQRLLEDGHRVIFTYRSERPGVKTLRDLGALGLHADFSS CCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCC EASILAFITELKSHTDSLRAIVHNASEWLAETADGEAEAFSRMFNIHMLAPYLINLHCAE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLQRSSPADIIHISDDVTRKGSSKHIGYCASKAGLDSLTLSFAARYAPSIKVNGIAPALL HHHCCCCCCEEEECCCCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHCCCEEECCCCEEEE LFNPDDDAEYRAKALAKSALGIEPGSEVIYQSLRYLLDNPYVTGTTLTVNGGRHVK EECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCEEEEECCCCCCC >Mature Secondary Structure TSPTAPILITGAGQRVGLHCAQRLLEDGHRVIFTYRSERPGVKTLRDLGALGLHADFSS CCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCC EASILAFITELKSHTDSLRAIVHNASEWLAETADGEAEAFSRMFNIHMLAPYLINLHCAE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLQRSSPADIIHISDDVTRKGSSKHIGYCASKAGLDSLTLSFAARYAPSIKVNGIAPALL HHHCCCCCCEEEECCCCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHCCCEEECCCCEEEE LFNPDDDAEYRAKALAKSALGIEPGSEVIYQSLRYLLDNPYVTGTTLTVNGGRHVK EECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA