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The map label for this gene is opuBB [H]

Identifier: 77457033

GI number: 77457033

Start: 950738

End: 951454

Strand: Reverse

Name: opuBB [H]

Synonym: Pfl01_0806

Alternate gene names: 77457033

Gene position: 951454-950738 (Counterclockwise)

Preceding gene: 77457036

Following gene: 77457032

Centisome position: 14.78

GC content: 63.46

Gene sequence:

>717_bases
GTGGCTATCCGCTATGGCAAAGGGCTGATGGGAGGTGCGGTGGTGATCGCGCTCCTGGCCCTGCTGGTCCACTGGATCGG
CATCAACACGATCGAACACTACCGCGACGATTTGTTGTTTTACCTGCAAGCTCATCTGATTCTCGTCCTCGCTTCAATGC
TGGCCGCCCTGGTCGTGGGCATTCCCGCCGGTATTTTCCTGAGCCGCCCGACCATGGTCGGACGCGCCGAACGCTTCATG
CAGATCTTCAACATCGGCAACACCGTGCCACCGCTGGCCGTGCTCGCAATTGCCCTGGGGATTCTCGGCATCGGCAGCGG
TCCGGCGATCTTCGCTCTGTTCCTCGCCTCGCTGTTGCCGATTGTGCGCAACACCTATGAAGGCCTGAAAAACGTCCAGG
GCTCGCTGAAAGAAGCCGCCGTCGGCATCGGCATGACCCCGCGTCAGGTGCTGTGGAAAGTCGAATTGCCCAACGCCGTG
CCGATCATCGTCGGCGGTGTGCGGGTCGCGCTGGCGATCAACGTCGGTACCGCGCCGCTGGCCTTCCTGATCGGCGCCAA
CAGCCTCGGCAGCCTGATCTTTCCCGGCATCGCCCTGAACAATCAGCCGCAACTGCTGCTCGGCGCCGCGTGCACCGCGC
TCCTGGCCCTGCTGCTCGATGGCGTGGTCACCCTCGCCAGCCGTCTCTGGCTGGAACGCGGTTTGCGCCCGTCTTGA

Upstream 100 bases:

>100_bases
ACTGAAAAAAAGCTGCTTCTCGCGAACGACTCTCCCGGCAGCCAAGGCTTGGCATGCCACACGGGACTGCGTTCGCCGAC
TAAAAAAAAGGAGTCCGCCT

Downstream 100 bases:

>100_bases
GGCTTTTGCGAAGGAATGAATATGAAACGACTTAGCTTGATTCTGGGCTGCGTGCTGCTCTTCGCAGGTATCGCCCAAGC
CGCCGACAAACCGGTGATTC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MAIRYGKGLMGGAVVIALLALLVHWIGINTIEHYRDDLLFYLQAHLILVLASMLAALVVGIPAGIFLSRPTMVGRAERFM
QIFNIGNTVPPLAVLAIALGILGIGSGPAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWKVELPNAV
PIIVGGVRVALAINVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLLDGVVTLASRLWLERGLRPS

Sequences:

>Translated_238_residues
MAIRYGKGLMGGAVVIALLALLVHWIGINTIEHYRDDLLFYLQAHLILVLASMLAALVVGIPAGIFLSRPTMVGRAERFM
QIFNIGNTVPPLAVLAIALGILGIGSGPAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWKVELPNAV
PIIVGGVRVALAINVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLLDGVVTLASRLWLERGLRPS
>Mature_237_residues
AIRYGKGLMGGAVVIALLALLVHWIGINTIEHYRDDLLFYLQAHLILVLASMLAALVVGIPAGIFLSRPTMVGRAERFMQ
IFNIGNTVPPLAVLAIALGILGIGSGPAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWKVELPNAVP
IIVGGVRVALAINVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLLDGVVTLASRLWLERGLRPS

Specific function: Involved in a high affinity multicomponent binding- protein-dependent transport system for choline; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788449, Length=177, Percent_Identity=41.8079096045198, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788451, Length=200, Percent_Identity=36, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789033, Length=182, Percent_Identity=30.7692307692308, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786564, Length=158, Percent_Identity=33.5443037974684, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24991; Mature: 24859

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRYGKGLMGGAVVIALLALLVHWIGINTIEHYRDDLLFYLQAHLILVLASMLAALVVG
CCEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPAGIFLSRPTMVGRAERFMQIFNIGNTVPPLAVLAIALGILGIGSGPAIFALFLASLLP
CCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWKVELPNAVPIIVGGVRVALAINVGTAPL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCEEEECCEEEEEEEECCCHHH
AFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLLDGVVTLASRLWLERGLRPS
HHHHCCCHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AIRYGKGLMGGAVVIALLALLVHWIGINTIEHYRDDLLFYLQAHLILVLASMLAALVVG
CEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPAGIFLSRPTMVGRAERFMQIFNIGNTVPPLAVLAIALGILGIGSGPAIFALFLASLLP
CCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLWKVELPNAVPIIVGGVRVALAINVGTAPL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCEEEECCEEEEEEEECCCHHH
AFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLLDGVVTLASRLWLERGLRPS
HHHHCCCHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592481; 10216873; 9384377 [H]