Click here to switch to the map view.

The map label for this gene is osmF [H]

Identifier: 77457032

GI number: 77457032

Start: 949823

End: 950716

Strand: Reverse

Name: osmF [H]

Synonym: Pfl01_0805

Alternate gene names: 77457032

Gene position: 950716-949823 (Counterclockwise)

Preceding gene: 77457033

Following gene: 77457031

Centisome position: 14.77

GC content: 60.29

Gene sequence:

>894_bases
ATGAAACGACTTAGCTTGATTCTGGGCTGCGTGCTGCTCTTCGCAGGTATCGCCCAAGCCGCCGACAAACCGGTGATTCG
CCTTGGCGCCCGGGTCTTCACCGAGCAGACCCTGCTCGCGGAAATCACCGCGCAATACCTGCGCAGCAAAGGCTACGACG
CGCAGATCACCGGAGGCCTGGGCAGCAACCTGGCCCGCAGCGCCCACGAAACCGGACAACTGGACATGCTCTGGGAATAC
ACCGGCGTGTCGCTGGTGGCCTACAACCACGTCACCGAAAAACTCGACAGCGCACAGTCCTACGCACGGGTGAAAGAACT
CGACGCGAAAAAAGGCCTGGTCTGGCTGACACCGTCGAAATTCAGCAACACCTACGCCCTCGCCCTGCCGAAAAAAGTGG
CTGAGGAATATCCGCAAATCCACACCATCAGCCAGTTGAACGACGTGTTGAAGGCTGAAGCCAAGACCAATCACCTGGTC
GCGTTGGACACCGAATTCGCCAACCGTTCCGACGGTCTGGACGGCATGGTCAAGCTCTACGACATGAACCTGACCCGCCA
GAACATCCGGCAGATGGACGCAGGGCTGGTGTACACCGCGCTGCGTAACGGTCAGGTGTTCGCCGGTCTGGTCTACACCA
CCGACGGTCGCCTCAACGCCTTCGGCCTGAAGCTGCTGGAAGACGACAAGCATTACTTCCCGGATTACACCGCAGCGCCG
GTCGTGCGTCAGGCCTACCTCGACGCGCATCCGCAACTGGCCGAGCAACTCAAGCCGCTGGCCGAGCTCTTCGACGACGA
AACCATGCGCCAGCTCAACGCGCGGGTCGATGTCGATCACGAAAGCCCGTCGAAAGTCGCTGCCGATTTCCTGCGCCAGC
ATCCACTGAACTAA

Upstream 100 bases:

>100_bases
GCTCCTGGCCCTGCTGCTCGATGGCGTGGTCACCCTCGCCAGCCGTCTCTGGCTGGAACGCGGTTTGCGCCCGTCTTGAG
GCTTTTGCGAAGGAATGAAT

Downstream 100 bases:

>100_bases
AGGAGGAAAAGTCATGGAATTTTTGAACGCCTTTTCCCACCTCGACTGGCAGCAGGTGATGCACCTGACCTGGCAGCACA
TCACCCTGGTCGGCATCGCC

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKRLSLILGCVLLFAGIAQAADKPVIRLGARVFTEQTLLAEITAQYLRSKGYDAQITGGLGSNLARSAHETGQLDMLWEY
TGVSLVAYNHVTEKLDSAQSYARVKELDAKKGLVWLTPSKFSNTYALALPKKVAEEYPQIHTISQLNDVLKAEAKTNHLV
ALDTEFANRSDGLDGMVKLYDMNLTRQNIRQMDAGLVYTALRNGQVFAGLVYTTDGRLNAFGLKLLEDDKHYFPDYTAAP
VVRQAYLDAHPQLAEQLKPLAELFDDETMRQLNARVDVDHESPSKVAADFLRQHPLN

Sequences:

>Translated_297_residues
MKRLSLILGCVLLFAGIAQAADKPVIRLGARVFTEQTLLAEITAQYLRSKGYDAQITGGLGSNLARSAHETGQLDMLWEY
TGVSLVAYNHVTEKLDSAQSYARVKELDAKKGLVWLTPSKFSNTYALALPKKVAEEYPQIHTISQLNDVLKAEAKTNHLV
ALDTEFANRSDGLDGMVKLYDMNLTRQNIRQMDAGLVYTALRNGQVFAGLVYTTDGRLNAFGLKLLEDDKHYFPDYTAAP
VVRQAYLDAHPQLAEQLKPLAELFDDETMRQLNARVDVDHESPSKVAADFLRQHPLN
>Mature_297_residues
MKRLSLILGCVLLFAGIAQAADKPVIRLGARVFTEQTLLAEITAQYLRSKGYDAQITGGLGSNLARSAHETGQLDMLWEY
TGVSLVAYNHVTEKLDSAQSYARVKELDAKKGLVWLTPSKFSNTYALALPKKVAEEYPQIHTISQLNDVLKAEAKTNHLV
ALDTEFANRSDGLDGMVKLYDMNLTRQNIRQMDAGLVYTALRNGQVFAGLVYTTDGRLNAFGLKLLEDDKHYFPDYTAAP
VVRQAYLDAHPQLAEQLKPLAELFDDETMRQLNARVDVDHESPSKVAADFLRQHPLN

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=307, Percent_Identity=33.2247557003257, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33069; Mature: 33069

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLSLILGCVLLFAGIAQAADKPVIRLGARVFTEQTLLAEITAQYLRSKGYDAQITGGL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
GSNLARSAHETGQLDMLWEYTGVSLVAYNHVTEKLDSAQSYARVKELDAKKGLVWLTPSK
CHHHHHHHHHCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
FSNTYALALPKKVAEEYPQIHTISQLNDVLKAEAKTNHLVALDTEFANRSDGLDGMVKLY
CCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEH
DMNLTRQNIRQMDAGLVYTALRNGQVFAGLVYTTDGRLNAFGLKLLEDDKHYFPDYTAAP
CCCCCHHHHHHHHCHHHEEHCCCCCEEEEEEEECCCCEEHHHHEEEECCCCCCCCCCHHH
VVRQAYLDAHPQLAEQLKPLAELFDDETMRQLNARVDVDHESPSKVAADFLRQHPLN
HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRLSLILGCVLLFAGIAQAADKPVIRLGARVFTEQTLLAEITAQYLRSKGYDAQITGGL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
GSNLARSAHETGQLDMLWEYTGVSLVAYNHVTEKLDSAQSYARVKELDAKKGLVWLTPSK
CHHHHHHHHHCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
FSNTYALALPKKVAEEYPQIHTISQLNDVLKAEAKTNHLVALDTEFANRSDGLDGMVKLY
CCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEH
DMNLTRQNIRQMDAGLVYTALRNGQVFAGLVYTTDGRLNAFGLKLLEDDKHYFPDYTAAP
CCCCCHHHHHHHHCHHHEEHCCCCCEEEEEEEECCCCEEHHHHEEEECCCCCCCCCCHHH
VVRQAYLDAHPQLAEQLKPLAELFDDETMRQLNARVDVDHESPSKVAADFLRQHPLN
HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]