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The map label for this gene is rbfA [H]

Identifier: 77457007

GI number: 77457007

Start: 916413

End: 916814

Strand: Direct

Name: rbfA [H]

Synonym: Pfl01_0780

Alternate gene names: 77457007

Gene position: 916413-916814 (Clockwise)

Preceding gene: 77457006

Following gene: 77457008

Centisome position: 14.23

GC content: 60.45

Gene sequence:

>402_bases
ATGGCAAAAGAATACAGCCGTACCCAACGTATCGGCGATCAGATGCAGCGTGAGCTGGCCCAGCTGATCCGTCGTGAAGT
CAAAGACCCGCGCGTCGGCCTGGTCACCATTACCGCTGTGGAAGTCAGCCGTGACGTCGGTCACGCAAAGATCTTCATCA
CCGTGATGGGGCAGGACAACGCCGAAGACATCGCGCAAAGCATCAAGGTTCTCAACGCTGCCGCCGGCTTCCTGCGCATG
CAGCTGGCCCGTGAAATGAAGCTGCGCAGCGTGCCGCAATTGCACTTCCACTACGACGAAAGCGTCGTGCGGGGTGCGCA
CCTGTCGGCCCTGATCGAGCGCGCCGTGGCTGAGGACAATCAGCACGTGGCTGCGGCAGAACCCGAAGACACCAAGGAGT
AA

Upstream 100 bases:

>100_bases
GACTCTAAACGCAACGCCCGGTCTGGCTTTTGTCAGGCCGGGCGTTTGCCGCTTTCAGACCTTGCGGGTTTCACCGCAGG
GCAGTAACAGGTAACAAATC

Downstream 100 bases:

>100_bases
CTCGGTGGCTCAGGTCAAACGTATCCGTCGTAACGTCAGCGGCATCATCCTGCTCGACAAGCCGCTGGGGTTCACCTCCA
ACGCAGCCTTGCAGAAGGTT

Product: ribosome-binding factor A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAKEYSRTQRIGDQMQRELAQLIRREVKDPRVGLVTITAVEVSRDVGHAKIFITVMGQDNAEDIAQSIKVLNAAAGFLRM
QLAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAEDNQHVAAAEPEDTKE

Sequences:

>Translated_133_residues
MAKEYSRTQRIGDQMQRELAQLIRREVKDPRVGLVTITAVEVSRDVGHAKIFITVMGQDNAEDIAQSIKVLNAAAGFLRM
QLAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAEDNQHVAAAEPEDTKE
>Mature_132_residues
AKEYSRTQRIGDQMQRELAQLIRREVKDPRVGLVTITAVEVSRDVGHAKIFITVMGQDNAEDIAQSIKVLNAAAGFLRMQ
LAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAEDNQHVAAAEPEDTKE

Specific function: Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA [H]

COG id: COG0858

COG function: function code J; Ribosome-binding factor A

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbfA family [H]

Homologues:

Organism=Escherichia coli, GI1789558, Length=134, Percent_Identity=41.044776119403, Blast_Score=120, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR000238
- InterPro:   IPR020053
- ProDom:   PD007327 [H]

Pfam domain/function: PF02033 RBFA [H]

EC number: NA

Molecular weight: Translated: 14932; Mature: 14801

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS01319 RBFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEYSRTQRIGDQMQRELAQLIRREVKDPRVGLVTITAVEVSRDVGHAKIFITVMGQDN
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHCCCCCEEEEEEEECCCC
AEDIAQSIKVLNAAAGFLRMQLAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAEDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCC
QHVAAAEPEDTKE
CCEECCCCCCCCC
>Mature Secondary Structure 
AKEYSRTQRIGDQMQRELAQLIRREVKDPRVGLVTITAVEVSRDVGHAKIFITVMGQDN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHCCCCCEEEEEEEECCCC
AEDIAQSIKVLNAAAGFLRMQLAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAEDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCC
QHVAAAEPEDTKE
CCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA