| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is lutA [H]
Identifier: 77456979
GI number: 77456979
Start: 884666
End: 885490
Strand: Reverse
Name: lutA [H]
Synonym: Pfl01_0752
Alternate gene names: 77456979
Gene position: 885490-884666 (Counterclockwise)
Preceding gene: 77456980
Following gene: 77456978
Centisome position: 13.75
GC content: 62.67
Gene sequence:
>825_bases ATGAGCGAGCTTTTTTACAACGCTGTGCCCAACGCCACTCGCGTCGCACCGCCACTGCCCGAACCCCGGCAATACCCCAG CGAGAAACCGTCGCGGGTCTACCTGTTCGGCACGTGTGTGGTCGACCTGTTCTACCCGGAAGCCGGGATGGACGCGATCC ACTTGCTGGAGCGCGAAGGCATCCGGGTCGACTACCCGCAAGGGCAGAGCTGCTGCGGACAACCGGCCTACACATCGGGT TACACCGAGCAGGCACGGACGGTGGCGCGCTCGCAACTGGCGCTGTTTGCCGGGGACTGTCCGGTGGTGGTGCCGTCGGG TTCGTGCGCCGGAATGATCCGCGAGCATTACGCCGACTTGTTCAAGGACGAGCCGGAAACGTTGACACAGGTTCAGGCCC TTGCGGACCGTACCTATGAGCTGGCCGAGTTTCTGCTGTTCGTCTGCAAGGTGCAGCTCAAGGACAGCGGCGAGCCGGTC AAAGTGGCGCTGCACACCTCGTGTTCGGCGCGACGGGAAATGAACACCCACCTGCACGGCCGCGAGTTGTTGGCGCAGTT GAGCAACGTGGAACGGGTCAACCACGATCACGAAAGCGAATGCTGTGGCTTCGGTGGGACATTCAGCGTCCGTATGCCAG ACATTTCCGGCGCGATGGTGGCCGACAAGACCCGGGCGTTGAAGGAATCCGGCGCGCATCAGGTACTCAGTGCCGACTGC GGCTGCCTGATGAACATCAACGGCTCGCTGGAAAAACAGCAGGAAGCACTGCGCGGGCAACACCTGGCGAGCTTCCTCTG GCAACGAACCGGAGGTGCGCGATGA
Upstream 100 bases:
>100_bases AGCAATTCACAACCCGGTCTGTAAGGCTGCTGAAAGCAACGCGCTCTATATTCGGCAGCCTCAACAGACGGATAACCGGG CCCACCCGGAGACACGCCTG
Downstream 100 bases:
>100_bases GCACTTCCACGATTATTCCTACGGTTGCCGTAGAAGAAGACTTCCGCACCCGGGCACACAATGCCTTGGGCGATTCGCAG TTACGGAACAACTTCCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSELFYNAVPNATRVAPPLPEPRQYPSEKPSRVYLFGTCVVDLFYPEAGMDAIHLLEREGIRVDYPQGQSCCGQPAYTSG YTEQARTVARSQLALFAGDCPVVVPSGSCAGMIREHYADLFKDEPETLTQVQALADRTYELAEFLLFVCKVQLKDSGEPV KVALHTSCSARREMNTHLHGRELLAQLSNVERVNHDHESECCGFGGTFSVRMPDISGAMVADKTRALKESGAHQVLSADC GCLMNINGSLEKQQEALRGQHLASFLWQRTGGAR
Sequences:
>Translated_274_residues MSELFYNAVPNATRVAPPLPEPRQYPSEKPSRVYLFGTCVVDLFYPEAGMDAIHLLEREGIRVDYPQGQSCCGQPAYTSG YTEQARTVARSQLALFAGDCPVVVPSGSCAGMIREHYADLFKDEPETLTQVQALADRTYELAEFLLFVCKVQLKDSGEPV KVALHTSCSARREMNTHLHGRELLAQLSNVERVNHDHESECCGFGGTFSVRMPDISGAMVADKTRALKESGAHQVLSADC GCLMNINGSLEKQQEALRGQHLASFLWQRTGGAR >Mature_273_residues SELFYNAVPNATRVAPPLPEPRQYPSEKPSRVYLFGTCVVDLFYPEAGMDAIHLLEREGIRVDYPQGQSCCGQPAYTSGY TEQARTVARSQLALFAGDCPVVVPSGSCAGMIREHYADLFKDEPETLTQVQALADRTYELAEFLLFVCKVQLKDSGEPVK VALHTSCSARREMNTHLHGRELLAQLSNVERVNHDHESECCGFGGTFSVRMPDISGAMVADKTRALKESGAHQVLSADCG CLMNINGSLEKQQEALRGQHLASFLWQRTGGAR
Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutA/ykgE family [H]
Homologues:
Organism=Escherichia coli, GI1786497, Length=240, Percent_Identity=35, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1788576, Length=252, Percent_Identity=29.3650793650794, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI48994913, Length=248, Percent_Identity=22.5806451612903, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004017 - InterPro: IPR022822 [H]
Pfam domain/function: PF02754 CCG [H]
EC number: NA
Molecular weight: Translated: 30157; Mature: 30026
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELFYNAVPNATRVAPPLPEPRQYPSEKPSRVYLFGTCVVDLFYPEAGMDAIHLLEREG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHCCCCCCHHHHHHHHCC IRVDYPQGQSCCGQPAYTSGYTEQARTVARSQLALFAGDCPVVVPSGSCAGMIREHYADL CEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHH FKDEPETLTQVQALADRTYELAEFLLFVCKVQLKDSGEPVKVALHTSCSARREMNTHLHG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHH RELLAQLSNVERVNHDHESECCGFGGTFSVRMPDISGAMVADKTRALKESGAHQVLSADC HHHHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHCCC GCLMNINGSLEKQQEALRGQHLASFLWQRTGGAR CEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SELFYNAVPNATRVAPPLPEPRQYPSEKPSRVYLFGTCVVDLFYPEAGMDAIHLLEREG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHCCCCCCHHHHHHHHCC IRVDYPQGQSCCGQPAYTSGYTEQARTVARSQLALFAGDCPVVVPSGSCAGMIREHYADL CEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHH FKDEPETLTQVQALADRTYELAEFLLFVCKVQLKDSGEPVKVALHTSCSARREMNTHLHG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHH RELLAQLSNVERVNHDHESECCGFGGTFSVRMPDISGAMVADKTRALKESGAHQVLSADC HHHHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHCCC GCLMNINGSLEKQQEALRGQHLASFLWQRTGGAR CEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA