| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456970
Identifier: 77456970
GI number: 77456970
Start: 870929
End: 872656
Strand: Reverse
Name: 77456970
Synonym: Pfl01_0743
Alternate gene names: NA
Gene position: 872656-870929 (Counterclockwise)
Preceding gene: 77456974
Following gene: 77456969
Centisome position: 13.55
GC content: 41.32
Gene sequence:
>1728_bases ATGAGCAGTGCAGAATCAGTTAACGTAGGTTTCGACGCGATCCGCGTTTGTGAGGCGATCGCAAAAATAGGCTATGAGCC ATACACCGCTATAATGGATATTATAGACAACTCAGTTACCGCAGAGGCGTCAACTATTTCCATTTCGGTAGAATTGAGAC CAGGAAAAACGCTAAAGAATAGGAATAGTGTATCAAGCTATAAAATAATGGACGACGGCAAAGGCATGTCTCACGACGAG ATAGTCAATGCCTTCACCTTAGGTTCGAAAAGAAACTACGGTAAAAACAGCCTTTCGAAGTATGGCATGGGCCTTAAGTC GGCAGGCCTTTCTCTCGGAAGCAAAATAACGATCACAAGTAAAAAAGACGGAGTAATTTCCGACAAGTACACTTTCGACC TCGAGGAGATTGAGAAGGAGAACAAGCTTGCTTTGATAAGACAGCCGCTCACGGAAGCTGAAAAGTTAGATTTCTCAAGC GATGTAAACGGCTCAACTGGAACCATTGTAGAGATTGCGGGATGTGAAAATGTTAATCAATCCTCGCCTGGAACCACTTT ATCAAAGTTGAGGGAACGCCTTGGCGTTGTCTACTATACTTTTCTCAAAGACGAAGAAAACCCACTAAGCATTAGAATCC GAACTGCGCTAAGTGATAAAAAAGGGGAATATGAGGAAATAAAAGCAAAAGATCTGCTATTTACTGAAATGGCAAGTAAA AATACCGGTTGGTCGCTTGATAGCTACGACTTCTTTAGTCCATACCTAATTCTAGATGAAGACTGGGATTCGCTGCGGGA TAAAGATAATAATCCATTACCGGCTATAAAAATTCAAGCCGTGGCGTTCCCTCAAGCGAGGATGGCAGATGAAAAATCCC CACTACCTATTGACAAAAAACTAATTGTAAAAAGCTATGGAGTATCACGCGAGAATAGTGGATTTTTCATATACAGAAAT GGACGCCTTATACGATGGGGAGATGGATTAGAGCGCGCAACGGGCAAGCCGCTGATAACCAAAGACGATATCAACATTCG GATCAGATTCGAAATTCAAGATGTGCACGACGACGTTTTACATGTCGACGTTTCAAAGCAGCGCCTAGAAATTGATGACG AACAAATATATAACCTTGAGACCATTATATCCAAAGCAATTCGGATAGCCAAAGAGATCCGCACAGCTTGTCATGAAAAA ATTAATCTTAAAAAAGGCGAGGGAGAAACGTTTAGCCAGTCGGTGAGAGATGTACCAGAGGATGACCCTCAACAGATGGG CAAAGGGGAAGTAGAGCCCGAAACACTTTCACGACAAGAAAAGAAAAACGAGGAAGCTCAGTTAGCTCTTGATAAAATAG CAGCTGAGAAAAAAGAAAATGGCGACATTCTTGACTTAGAAGCTGACTTTCAAAAAATCAGATACTCAAATAAGATACCC TTTGGACAAGTATGGAAACCTTACTTTGATTCAAAGGAAGGAGTTTTTGTTTGCATAAACAAAAACCACCCTTTTTATGA CGTATATTTGAATCGATTTGAAGACGGGTCAAAAGAAAGACTAACAGCAGAAGCCTTAATCTTCGCTTCAGCATTAGCTG AAAGTAATGTTTTTTCTTATGAGACCACCGTTACGCAAAGCGATCTAGAACGGATATTTCGTCGTTTCCATAGCAACATA CATCAATTTCTGCAGGATTGGACATGGGAAAACACCTCGGAGGATTAA
Upstream 100 bases:
>100_bases GAGTCATCGTAGTCTAGCTGCCCAAAGTATTATAACAATAATCTTTAGGAGAGGGCTGCCGAGATCACCAATATATTGAA GGGCTAATGGAGGGCTAAAA
Downstream 100 bases:
>100_bases TTACGCATTGCGGAACCGTTTGGGGAAGTCGCGGTAGATCATATCTTTATATGATCCTCACAACTGACCACGCCTACATC GGCGAAACTGGCAACCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Acetate/Butyrate Kinase Domain-Containing Protein; Type II Restriction- System Methylation Subunit
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MSSAESVNVGFDAIRVCEAIAKIGYEPYTAIMDIIDNSVTAEASTISISVELRPGKTLKNRNSVSSYKIMDDGKGMSHDE IVNAFTLGSKRNYGKNSLSKYGMGLKSAGLSLGSKITITSKKDGVISDKYTFDLEEIEKENKLALIRQPLTEAEKLDFSS DVNGSTGTIVEIAGCENVNQSSPGTTLSKLRERLGVVYYTFLKDEENPLSIRIRTALSDKKGEYEEIKAKDLLFTEMASK NTGWSLDSYDFFSPYLILDEDWDSLRDKDNNPLPAIKIQAVAFPQARMADEKSPLPIDKKLIVKSYGVSRENSGFFIYRN GRLIRWGDGLERATGKPLITKDDINIRIRFEIQDVHDDVLHVDVSKQRLEIDDEQIYNLETIISKAIRIAKEIRTACHEK INLKKGEGETFSQSVRDVPEDDPQQMGKGEVEPETLSRQEKKNEEAQLALDKIAAEKKENGDILDLEADFQKIRYSNKIP FGQVWKPYFDSKEGVFVCINKNHPFYDVYLNRFEDGSKERLTAEALIFASALAESNVFSYETTVTQSDLERIFRRFHSNI HQFLQDWTWENTSED
Sequences:
>Translated_575_residues MSSAESVNVGFDAIRVCEAIAKIGYEPYTAIMDIIDNSVTAEASTISISVELRPGKTLKNRNSVSSYKIMDDGKGMSHDE IVNAFTLGSKRNYGKNSLSKYGMGLKSAGLSLGSKITITSKKDGVISDKYTFDLEEIEKENKLALIRQPLTEAEKLDFSS DVNGSTGTIVEIAGCENVNQSSPGTTLSKLRERLGVVYYTFLKDEENPLSIRIRTALSDKKGEYEEIKAKDLLFTEMASK NTGWSLDSYDFFSPYLILDEDWDSLRDKDNNPLPAIKIQAVAFPQARMADEKSPLPIDKKLIVKSYGVSRENSGFFIYRN GRLIRWGDGLERATGKPLITKDDINIRIRFEIQDVHDDVLHVDVSKQRLEIDDEQIYNLETIISKAIRIAKEIRTACHEK INLKKGEGETFSQSVRDVPEDDPQQMGKGEVEPETLSRQEKKNEEAQLALDKIAAEKKENGDILDLEADFQKIRYSNKIP FGQVWKPYFDSKEGVFVCINKNHPFYDVYLNRFEDGSKERLTAEALIFASALAESNVFSYETTVTQSDLERIFRRFHSNI HQFLQDWTWENTSED >Mature_574_residues SSAESVNVGFDAIRVCEAIAKIGYEPYTAIMDIIDNSVTAEASTISISVELRPGKTLKNRNSVSSYKIMDDGKGMSHDEI VNAFTLGSKRNYGKNSLSKYGMGLKSAGLSLGSKITITSKKDGVISDKYTFDLEEIEKENKLALIRQPLTEAEKLDFSSD VNGSTGTIVEIAGCENVNQSSPGTTLSKLRERLGVVYYTFLKDEENPLSIRIRTALSDKKGEYEEIKAKDLLFTEMASKN TGWSLDSYDFFSPYLILDEDWDSLRDKDNNPLPAIKIQAVAFPQARMADEKSPLPIDKKLIVKSYGVSRENSGFFIYRNG RLIRWGDGLERATGKPLITKDDINIRIRFEIQDVHDDVLHVDVSKQRLEIDDEQIYNLETIISKAIRIAKEIRTACHEKI NLKKGEGETFSQSVRDVPEDDPQQMGKGEVEPETLSRQEKKNEEAQLALDKIAAEKKENGDILDLEADFQKIRYSNKIPF GQVWKPYFDSKEGVFVCINKNHPFYDVYLNRFEDGSKERLTAEALIFASALAESNVFSYETTVTQSDLERIFRRFHSNIH QFLQDWTWENTSED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65113; Mature: 64982
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAESVNVGFDAIRVCEAIAKIGYEPYTAIMDIIDNSVTAEASTISISVELRPGKTLKN CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCC RNSVSSYKIMDDGKGMSHDEIVNAFTLGSKRNYGKNSLSKYGMGLKSAGLSLGSKITITS CCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHCCCCCCCEEEEEC KKDGVISDKYTFDLEEIEKENKLALIRQPLTEAEKLDFSSDVNGSTGTIVEIAGCENVNQ CCCCCCCCCEEECHHHHCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC SSPGTTLSKLRERLGVVYYTFLKDEENPLSIRIRTALSDKKGEYEEIKAKDLLFTEMASK CCCCCHHHHHHHHHCEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC NTGWSLDSYDFFSPYLILDEDWDSLRDKDNNPLPAIKIQAVAFPQARMADEKSPLPIDKK CCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCEEEEEEEECCHHHHCCCCCCCCCCHH LIVKSYGVSRENSGFFIYRNGRLIRWGDGLERATGKPLITKDDINIRIRFEIQDVHDDVL HHHHHCCCCCCCCCEEEEECCEEEEECCCHHHCCCCCCEEECCCEEEEEEEEECCCCCEE HVDVSKQRLEIDDEQIYNLETIISKAIRIAKEIRTACHEKINLKKGEGETFSQSVRDVPE EEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC DDPQQMGKGEVEPETLSRQEKKNEEAQLALDKIAAEKKENGDILDLEADFQKIRYSNKIP CCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCC FGQVWKPYFDSKEGVFVCINKNHPFYDVYLNRFEDGSKERLTAEALIFASALAESNVFSY CCCCCCCCCCCCCCEEEEECCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHCCCEEE ETTVTQSDLERIFRRFHSNIHQFLQDWTWENTSED EEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SSAESVNVGFDAIRVCEAIAKIGYEPYTAIMDIIDNSVTAEASTISISVELRPGKTLKN CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCC RNSVSSYKIMDDGKGMSHDEIVNAFTLGSKRNYGKNSLSKYGMGLKSAGLSLGSKITITS CCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHCCCCCCCEEEEEC KKDGVISDKYTFDLEEIEKENKLALIRQPLTEAEKLDFSSDVNGSTGTIVEIAGCENVNQ CCCCCCCCCEEECHHHHCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC SSPGTTLSKLRERLGVVYYTFLKDEENPLSIRIRTALSDKKGEYEEIKAKDLLFTEMASK CCCCCHHHHHHHHHCEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC NTGWSLDSYDFFSPYLILDEDWDSLRDKDNNPLPAIKIQAVAFPQARMADEKSPLPIDKK CCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCEEEEEEEECCHHHHCCCCCCCCCCHH LIVKSYGVSRENSGFFIYRNGRLIRWGDGLERATGKPLITKDDINIRIRFEIQDVHDDVL HHHHHCCCCCCCCCEEEEECCEEEEECCCHHHCCCCCCEEECCCEEEEEEEEECCCCCEE HVDVSKQRLEIDDEQIYNLETIISKAIRIAKEIRTACHEKINLKKGEGETFSQSVRDVPE EEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC DDPQQMGKGEVEPETLSRQEKKNEEAQLALDKIAAEKKENGDILDLEADFQKIRYSNKIP CCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCC FGQVWKPYFDSKEGVFVCINKNHPFYDVYLNRFEDGSKERLTAEALIFASALAESNVFSY CCCCCCCCCCCCCCEEEEECCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHCCCEEE ETTVTQSDLERIFRRFHSNIHQFLQDWTWENTSED EEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA