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The map label for this gene is lrrA [H]

Identifier: 77456912

GI number: 77456912

Start: 798415

End: 799335

Strand: Reverse

Name: lrrA [H]

Synonym: Pfl01_0684

Alternate gene names: 77456912

Gene position: 799335-798415 (Counterclockwise)

Preceding gene: 77456915

Following gene: 77456911

Centisome position: 12.42

GC content: 61.78

Gene sequence:

>921_bases
ATGAGCAGCCGCCGCCCCGATCCGCTGGCCCAGGTCAGTGACTTTGACATTCGCCTGCTGCGAATTTTTCGCAGCGTGGT
GGAGTGCGGCGGCTTCTCGGCGGCGGAAACCGTGCTCGGCATCGGTCGCTCGGCGATCAGCCAGCAGATGAGCGACCTGG
AACAACGCCTCGGCCTGCGACTGTGCCAACGCGGGCGCGCCGGTTTCTCCCTGACCGAAGAAGGCCGCGAGGTCTATCAG
TCGGCTTTGCAGCTGCTGAGTGCATTGGAAAGTTTCCGCACCGAGGTCAACGGCCTGCACCAGCACTTGCGCGGTGAATT
GATCATCGGCCTGACCGACAACCTCGTCACCCTGCCCCACATGCGCATCACCCACGCGCTCGCGCAATTGAAGGAGCGCG
GGCCGGACGTACAAATCCAGATCCGCATGATCGCCCCCAATGAAGTCGAACAAGGCGTGCTCGACGGTCGCCTGCACGTC
GGCGTGGTGCCGCAGGCCAGTGCGTTGTCGGGACTGGAATATCAGCCGCTGTACAGCGAACGTTCGCTGCTTTATTGCGC
GGTGGGCCATCCGCTGTTTTACGTCGACGATAAACAGCTGGATGACGAGCGCCTCAACAGTCAGGACGCCATCGCCCCGA
CCTTCCGTTTGCCAGCGGAGATCCAGGCGCACTATCAGGCGCTCAATTGCACCGCCAGCGCATCCGACCGTGAAGGCATG
GCGTTCCTGATTCTGACCGGGCGTTACATCGGCTATTTGCCGGATCACTATGCCAGTCTCTGGGTTCAACAAGGTCGCTT
GCGCGCGCTCAAGGCCAGTACCCGCTTCTATGATTTGAGCCTTGCCTCGGTTACCCGCAAGGGCCGTCGCCCTCATCTGG
TACTGGAAAGTTTTCTCGAAAGCCTCGCCGCCACCCGCTGA

Upstream 100 bases:

>100_bases
GAAAGCGTTGTTGCAGCTAAATTGCCACGGGGATAAAGTCGGTGAAATTCAACTCTTCTAACCTTCAGTTAGAACTCTGC
TAAACAATGAGAACAACAGT

Downstream 100 bases:

>100_bases
CGACCGGGGTTTTATTCGCCCGGGGCTTGTCCCGCGCCGGTGGTTGCGCTATCAACGCAACTGGTTGCACCCCACAGACA
AACCCGGAAGTGCCTATGAC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSSRRPDPLAQVSDFDIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQMSDLEQRLGLRLCQRGRAGFSLTEEGREVYQ
SALQLLSALESFRTEVNGLHQHLRGELIIGLTDNLVTLPHMRITHALAQLKERGPDVQIQIRMIAPNEVEQGVLDGRLHV
GVVPQASALSGLEYQPLYSERSLLYCAVGHPLFYVDDKQLDDERLNSQDAIAPTFRLPAEIQAHYQALNCTASASDREGM
AFLILTGRYIGYLPDHYASLWVQQGRLRALKASTRFYDLSLASVTRKGRRPHLVLESFLESLAATR

Sequences:

>Translated_306_residues
MSSRRPDPLAQVSDFDIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQMSDLEQRLGLRLCQRGRAGFSLTEEGREVYQ
SALQLLSALESFRTEVNGLHQHLRGELIIGLTDNLVTLPHMRITHALAQLKERGPDVQIQIRMIAPNEVEQGVLDGRLHV
GVVPQASALSGLEYQPLYSERSLLYCAVGHPLFYVDDKQLDDERLNSQDAIAPTFRLPAEIQAHYQALNCTASASDREGM
AFLILTGRYIGYLPDHYASLWVQQGRLRALKASTRFYDLSLASVTRKGRRPHLVLESFLESLAATR
>Mature_305_residues
SSRRPDPLAQVSDFDIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQMSDLEQRLGLRLCQRGRAGFSLTEEGREVYQS
ALQLLSALESFRTEVNGLHQHLRGELIIGLTDNLVTLPHMRITHALAQLKERGPDVQIQIRMIAPNEVEQGVLDGRLHVG
VVPQASALSGLEYQPLYSERSLLYCAVGHPLFYVDDKQLDDERLNSQDAIAPTFRLPAEIQAHYQALNCTASASDREGMA
FLILTGRYIGYLPDHYASLWVQQGRLRALKASTRFYDLSLASVTRKGRRPHLVLESFLESLAATR

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787879, Length=180, Percent_Identity=29.4444444444444, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1790262, Length=296, Percent_Identity=26.3513513513513, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI157672245, Length=191, Percent_Identity=28.7958115183246, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786401, Length=264, Percent_Identity=26.8939393939394, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34157; Mature: 34025

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRRPDPLAQVSDFDIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQMSDLEQRLGLR
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LCQRGRAGFSLTEEGREVYQSALQLLSALESFRTEVNGLHQHLRGELIIGLTDNLVTLPH
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCH
MRITHALAQLKERGPDVQIQIRMIAPNEVEQGVLDGRLHVGVVPQASALSGLEYQPLYSE
HHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCC
RSLLYCAVGHPLFYVDDKQLDDERLNSQDAIAPTFRLPAEIQAHYQALNCTASASDREGM
CCEEEEEECCEEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCE
AFLILTGRYIGYLPDHYASLWVQQGRLRALKASTRFYDLSLASVTRKGRRPHLVLESFLE
EEEEEECCHHCCCCHHHHHHHHHHCHHHHHHHCCCEEEHHHHHHHHCCCCCHHHHHHHHH
SLAATR
HHHCCC
>Mature Secondary Structure 
SSRRPDPLAQVSDFDIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQMSDLEQRLGLR
CCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LCQRGRAGFSLTEEGREVYQSALQLLSALESFRTEVNGLHQHLRGELIIGLTDNLVTLPH
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCH
MRITHALAQLKERGPDVQIQIRMIAPNEVEQGVLDGRLHVGVVPQASALSGLEYQPLYSE
HHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCC
RSLLYCAVGHPLFYVDDKQLDDERLNSQDAIAPTFRLPAEIQAHYQALNCTASASDREGM
CCEEEEEECCEEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCE
AFLILTGRYIGYLPDHYASLWVQQGRLRALKASTRFYDLSLASVTRKGRRPHLVLESFLE
EEEEEECCHHCCCCHHHHHHHHHHCHHHHHHHCCCEEEHHHHHHHHCCCCCHHHHHHHHH
SLAATR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8661945 [H]