| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pcbC [H]
Identifier: 77456900
GI number: 77456900
Start: 786292
End: 787257
Strand: Reverse
Name: pcbC [H]
Synonym: Pfl01_0672
Alternate gene names: 77456900
Gene position: 787257-786292 (Counterclockwise)
Preceding gene: 77456901
Following gene: 77456899
Centisome position: 12.23
GC content: 63.04
Gene sequence:
>966_bases ATGAACCAACTTCCGATCATCGACATCTCGCCGCTCTACTCCGACGACCAGAACGCCTGGCCGGCCGTCGCCGAACAGAT CGACCACGCCTGCCGCGAATGGGGCTTCTTCTACATCAAGGGGCATCCGATTTCTGCGCAGCGCATTGCATCCCTGCTCG ATCACGCGCAACGCTTCTTCGCGCTGCCGGAAGCAGAAAAGCTCAGGATCGACATCACCCAGACCCGTCATCACCGCGGC TACGGGGCCATCGCCACCGAACAGCTCGACCCGGACAAACCCAGCGACCTCAAGGAAACCTTCGACATGGGCCTGCACCT GCCGGCCGATCATCCCGAGGTGCTGGCAGTAAAACCCTTGCGCGGTCCCAACCGTCATCCGGCCATTCCCGGCTGGGAAA CGTTGATGGAACAGCACTACCTCGACATGCAAGCGCTCGCGCAAACCCTGCTGCGTGCCATGACGTTAGCGCTGGGCATC GAGCGCGACTTCTTCGACACGCGCTTCAACGAGCCGGTCAGCGTGCTGCGGATGATCCACTACCCGCCGCGCCACACCGC CAGTTCCGCCGAACAGCAAGGTGCGGGCGCGCACACCGATTACGGCTGCATCACGCTGCTGTATCAGGACGCGGCCGGCG GCTTGCAGGTGAAAAATGTCAAAGGCCAGTGGATCGACGCACCGCCCATCGACGGCACCTTCGTGGTCAACCTCGGCGAC ATGATGGCGCGCTGGAGCAACGACCGTTATCGCTCGACCCCGCACCGGGTCATCAGCCCGCTCGGCGTGGATCGCTACTC GATGCCATTCTTCGCCGAGCCGCATCCGGATACTCGCATCGAGTGCCTGCCCGGTTGCCAGGACGCACAGCATCCGGCGA AATATCCGACCACCACCTGCGCCGAATTCCTGCTGTCGCGCTTCGCCGATACCTACGCCTATCGACGGGAGCAGGAAGCG GTGTGA
Upstream 100 bases:
>100_bases AACTACTACGTCGAAGGCATGAAGGCCGAGATGCCGAAGTAATCCACCTGCCCCTGACCGCTCCCTCTGCATCGGAGCGG TCGCTAACGAGCATTCGAAA
Downstream 100 bases:
>100_bases TGGATCGGTTGGTCAGGTTTTGCCAATTGTTTCGGCGGGCATCTGTAGAATGCTCGCCATTGCACCTGATGAGAAAAGAA TATGTACGACTGGCTCAACG
Product: 2OG-Fe(II) oxygenase
Products: NA
Alternate protein names: IPNS [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNQLPIIDISPLYSDDQNAWPAVAEQIDHACREWGFFYIKGHPISAQRIASLLDHAQRFFALPEAEKLRIDITQTRHHRG YGAIATEQLDPDKPSDLKETFDMGLHLPADHPEVLAVKPLRGPNRHPAIPGWETLMEQHYLDMQALAQTLLRAMTLALGI ERDFFDTRFNEPVSVLRMIHYPPRHTASSAEQQGAGAHTDYGCITLLYQDAAGGLQVKNVKGQWIDAPPIDGTFVVNLGD MMARWSNDRYRSTPHRVISPLGVDRYSMPFFAEPHPDTRIECLPGCQDAQHPAKYPTTTCAEFLLSRFADTYAYRREQEA V
Sequences:
>Translated_321_residues MNQLPIIDISPLYSDDQNAWPAVAEQIDHACREWGFFYIKGHPISAQRIASLLDHAQRFFALPEAEKLRIDITQTRHHRG YGAIATEQLDPDKPSDLKETFDMGLHLPADHPEVLAVKPLRGPNRHPAIPGWETLMEQHYLDMQALAQTLLRAMTLALGI ERDFFDTRFNEPVSVLRMIHYPPRHTASSAEQQGAGAHTDYGCITLLYQDAAGGLQVKNVKGQWIDAPPIDGTFVVNLGD MMARWSNDRYRSTPHRVISPLGVDRYSMPFFAEPHPDTRIECLPGCQDAQHPAKYPTTTCAEFLLSRFADTYAYRREQEA V >Mature_321_residues MNQLPIIDISPLYSDDQNAWPAVAEQIDHACREWGFFYIKGHPISAQRIASLLDHAQRFFALPEAEKLRIDITQTRHHRG YGAIATEQLDPDKPSDLKETFDMGLHLPADHPEVLAVKPLRGPNRHPAIPGWETLMEQHYLDMQALAQTLLRAMTLALGI ERDFFDTRFNEPVSVLRMIHYPPRHTASSAEQQGAGAHTDYGCITLLYQDAAGGLQVKNVKGQWIDAPPIDGTFVVNLGD MMARWSNDRYRSTPHRVISPLGVDRYSMPFFAEPHPDTRIECLPGCQDAQHPAKYPTTTCAEFLLSRFADTYAYRREQEA V
Specific function: Removes, in the presence of oxygen, 4 hydrogen atoms from delta-L-(alpha-aminoadipyl)-L-cysteinyl-D-valine (ACV) to form the azetidinone and thiazolidine rings of isopenicillin [H]
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain [H]
Homologues:
Organism=Drosophila melanogaster, GI28572124, Length=340, Percent_Identity=25.8823529411765, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI85816264, Length=296, Percent_Identity=27.7027027027027, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002057 - InterPro: IPR002283 - InterPro: IPR005123 [H]
Pfam domain/function: PF03171 2OG-FeII_Oxy [H]
EC number: =1.21.3.1 [H]
Molecular weight: Translated: 36342; Mature: 36342
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLPIIDISPLYSDDQNAWPAVAEQIDHACREWGFFYIKGHPISAQRIASLLDHAQRFF CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHH ALPEAEKLRIDITQTRHHRGYGAIATEQLDPDKPSDLKETFDMGLHLPADHPEVLAVKPL CCCCCCEEEEEEEHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECC RGPNRHPAIPGWETLMEQHYLDMQALAQTLLRAMTLALGIERDFFDTRFNEPVSVLRMIH CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHC YPPRHTASSAEQQGAGAHTDYGCITLLYQDAAGGLQVKNVKGQWIDAPPIDGTFVVNLGD CCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEHHH MMARWSNDRYRSTPHRVISPLGVDRYSMPFFAEPHPDTRIECLPGCQDAQHPAKYPTTTC HHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHH AEFLLSRFADTYAYRREQEAV HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQLPIIDISPLYSDDQNAWPAVAEQIDHACREWGFFYIKGHPISAQRIASLLDHAQRFF CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHH ALPEAEKLRIDITQTRHHRGYGAIATEQLDPDKPSDLKETFDMGLHLPADHPEVLAVKPL CCCCCCEEEEEEEHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECC RGPNRHPAIPGWETLMEQHYLDMQALAQTLLRAMTLALGIERDFFDTRFNEPVSVLRMIH CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHC YPPRHTASSAEQQGAGAHTDYGCITLLYQDAAGGLQVKNVKGQWIDAPPIDGTFVVNLGD CCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEHHH MMARWSNDRYRSTPHRVISPLGVDRYSMPFFAEPHPDTRIECLPGCQDAQHPAKYPTTTC HHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHH AEFLLSRFADTYAYRREQEAV HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1956290 [H]