| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is add [H]
Identifier: 77456899
GI number: 77456899
Start: 785257
End: 786210
Strand: Reverse
Name: add [H]
Synonym: Pfl01_0671
Alternate gene names: 77456899
Gene position: 786210-785257 (Counterclockwise)
Preceding gene: 77456900
Following gene: 77456895
Centisome position: 12.21
GC content: 60.48
Gene sequence:
>954_bases ATGTACGACTGGCTCAACGCCCTGCCCAAGGCCGAACTGCACCTGCACCTCGAAGGCTCGCTGGAGCCCGAGCTGCTGTT CGCCCTGGCCGAACGCAACAAGATCGCCCTGCCGTGGAGCGACGTCGAAACCCTGCGCAAGGCTTACGCCTTCAACAACC TGCAGGAATTCCTCGACCTGTATTACCAGGGCGCCGACGTGCTGCGCACCTCCCAGGATTTCTACGACCTGACCTGGGCC TATCTGCTGCGCTGCAAAGAACAGAACGTGATTCACACCGAGCCGTTCTTCGATCCGCAGACCCACACCGACCGTGGCAT CCCGTTTGAAGTGGTGCTCAACGGCATCGCCGCCGCGCTGAAGGATGGCGAGCAGCAACTGGGCATCACCAGCGGCCTGA TCCTGAGTTTCCTGCGTCACCTGAGCGAAGACGAAGCACAGAAAACCCTCGACCAGGCGCTGCCGTTCCGTGATGCGTTT GTTGCGGTAGGTCTGGACAGTTCCGAAATGGGCCACCCGCCGAGCAAGTTCCAGCGCGTGTTCGACCGTGCCCGTCATGA AGGTTTCCTGACCGTGGCTCACGCTGGCGAAGAAGGCCCGCCGGAGTACATCTGGGAAGCCATCGACCTGCTGAAAATCC AGCGCATCGACCATGGCGTACGCGCCATCGAAGATGAGCGTCTGATGCAGCGGATCATCGACGAGCAGATCCCGCTGACC GTGTGCCCGCTGTCGAATACCAAGCTCTGCGTGTTCGATCACATGTCCCAGCACAATATCCTCGACATGCTCGAGCGTGG CGTGAAGGTCACGGTGAACTCCGATGACCCGGCGTACTTCGGCGGTTATGTCACCGAGAACTTCCATGCGCTGCACGAAC ATCTGGGCATGACCCAGGATCAGGCCAAACGCCTGGCGCAGAACAGCCTGGATGCGCGGTTGGTGAAACCGTAA
Upstream 100 bases:
>100_bases GGAGCAGGAAGCGGTGTGATGGATCGGTTGGTCAGGTTTTGCCAATTGTTTCGGCGGGCATCTGTAGAATGCTCGCCATT GCACCTGATGAGAAAAGAAT
Downstream 100 bases:
>100_bases CAGCACAAGGCCGTTCGAACACACCCGTGTTCGAACGGCTTTTCAGTTCTCAGCGCACAACCGCTTCAGTCAACTCTTCC AGCGTCTTGCCCCGGGTCTC
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MYDWLNALPKAELHLHLEGSLEPELLFALAERNKIALPWSDVETLRKAYAFNNLQEFLDLYYQGADVLRTSQDFYDLTWA YLLRCKEQNVIHTEPFFDPQTHTDRGIPFEVVLNGIAAALKDGEQQLGITSGLILSFLRHLSEDEAQKTLDQALPFRDAF VAVGLDSSEMGHPPSKFQRVFDRARHEGFLTVAHAGEEGPPEYIWEAIDLLKIQRIDHGVRAIEDERLMQRIIDEQIPLT VCPLSNTKLCVFDHMSQHNILDMLERGVKVTVNSDDPAYFGGYVTENFHALHEHLGMTQDQAKRLAQNSLDARLVKP
Sequences:
>Translated_317_residues MYDWLNALPKAELHLHLEGSLEPELLFALAERNKIALPWSDVETLRKAYAFNNLQEFLDLYYQGADVLRTSQDFYDLTWA YLLRCKEQNVIHTEPFFDPQTHTDRGIPFEVVLNGIAAALKDGEQQLGITSGLILSFLRHLSEDEAQKTLDQALPFRDAF VAVGLDSSEMGHPPSKFQRVFDRARHEGFLTVAHAGEEGPPEYIWEAIDLLKIQRIDHGVRAIEDERLMQRIIDEQIPLT VCPLSNTKLCVFDHMSQHNILDMLERGVKVTVNSDDPAYFGGYVTENFHALHEHLGMTQDQAKRLAQNSLDARLVKP >Mature_317_residues MYDWLNALPKAELHLHLEGSLEPELLFALAERNKIALPWSDVETLRKAYAFNNLQEFLDLYYQGADVLRTSQDFYDLTWA YLLRCKEQNVIHTEPFFDPQTHTDRGIPFEVVLNGIAAALKDGEQQLGITSGLILSFLRHLSEDEAQKTLDQALPFRDAF VAVGLDSSEMGHPPSKFQRVFDRARHEGFLTVAHAGEEGPPEYIWEAIDLLKIQRIDHGVRAIEDERLMQRIIDEQIPLT VCPLSNTKLCVFDHMSQHNILDMLERGVKVTVNSDDPAYFGGYVTENFHALHEHLGMTQDQAKRLAQNSLDARLVKP
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=323, Percent_Identity=24.7678018575851, Blast_Score=110, Evalue=2e-24, Organism=Escherichia coli, GI1787910, Length=311, Percent_Identity=28.2958199356913, Blast_Score=140, Evalue=1e-34, Organism=Caenorhabditis elegans, GI32565969, Length=319, Percent_Identity=27.5862068965517, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538512, Length=319, Percent_Identity=27.5862068965517, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324188, Length=324, Percent_Identity=44.7530864197531, Blast_Score=263, Evalue=2e-71, Organism=Drosophila melanogaster, GI24645260, Length=316, Percent_Identity=26.2658227848101, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 36177; Mature: 36177
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDWLNALPKAELHLHLEGSLEPELLFALAERNKIALPWSDVETLRKAYAFNNLQEFLDL CCCHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHH YYQGADVLRTSQDFYDLTWAYLLRCKEQNVIHTEPFFDPQTHTDRGIPFEVVLNGIAAAL HHCCHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH KDGEQQLGITSGLILSFLRHLSEDEAQKTLDQALPFRDAFVAVGLDSSEMGHPPSKFQRV HCCHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCHHHHHHH FDRARHEGFLTVAHAGEEGPPEYIWEAIDLLKIQRIDHGVRAIEDERLMQRIIDEQIPLT HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE VCPLSNTKLCVFDHMSQHNILDMLERGVKVTVNSDDPAYFGGYVTENFHALHEHLGMTQD EECCCCCEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHH QAKRLAQNSLDARLVKP HHHHHHHHCCCCCCCCC >Mature Secondary Structure MYDWLNALPKAELHLHLEGSLEPELLFALAERNKIALPWSDVETLRKAYAFNNLQEFLDL CCCHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHH YYQGADVLRTSQDFYDLTWAYLLRCKEQNVIHTEPFFDPQTHTDRGIPFEVVLNGIAAAL HHCCHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH KDGEQQLGITSGLILSFLRHLSEDEAQKTLDQALPFRDAFVAVGLDSSEMGHPPSKFQRV HCCHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCHHHHHHH FDRARHEGFLTVAHAGEEGPPEYIWEAIDLLKIQRIDHGVRAIEDERLMQRIIDEQIPLT HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE VCPLSNTKLCVFDHMSQHNILDMLERGVKVTVNSDDPAYFGGYVTENFHALHEHLGMTQD EECCCCCEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHH QAKRLAQNSLDARLVKP HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA