Click here to switch to the map view.

The map label for this gene is 77456877

Identifier: 77456877

GI number: 77456877

Start: 760342

End: 761280

Strand: Reverse

Name: 77456877

Synonym: Pfl01_0649

Alternate gene names: NA

Gene position: 761280-760342 (Counterclockwise)

Preceding gene: 77456880

Following gene: 77456876

Centisome position: 11.82

GC content: 67.63

Gene sequence:

>939_bases
ATGAACAGTCGCGTCACTCTGGGCCTGGCCGGCATCTTGCTGCTGGGTGCCGTCATCGCCGGTTACTGGGGGCTCACCTT
GAGTCGCCAGGCCCCGGCTGCCGAACCTGTGGTTGCCGCCCCTGCTACCCCTGTCGACACCCCGGCACCGGTGGAGGATC
CGACTCGCCAGCCGGTGGTGGTGCTGGTGCGCGATATCGCACCGTTCGTGACCCTCACCGCCGCCGATGTCACCGTGGAA
AAACTGCGCACCGCCCCCGCCGGCAGCCTGGCCAGCGTCGATCAGGTGATCGGCCGCACACCCTGGCGCGCCCTGTCCGC
CGGCACCTGGCTGACCCAGGAAAGCTTCGAGGCCGGCAGCCCGCTGGCGCGGATGATCCGTCCCGGCGAACGCGCACTGG
CGGTCGCGGTGGATGAAGTGATCAATGCCGGCGGCCAACTGGCACCGGGGGATTATGTCGATGTGCTGCTGTTCTTGCGC
AAGGATGAGAACAACCCGCAGCCGACCGCCCAACTGGTGGTGCCTGCCGTGCGGGTACTGGGCGTGGGCAGTCAGATGGG
CCTGACCAACAGCGGCCAGCCCGCCAGTCCCGCCCACAGCGAAGAAGAAAAACTCAAGCAGGAACAACTGCGCGCCGCCG
CCCGCAGCGTGGTGCTCGCGGTGCCTGAGCCGTTGCTCAACCGCCTGATGCTGGCCTCCAGCGCCGGCGTATTGCGGCTG
GCCGTGCGCAGCGCCGACGAACAACAACTGGCCCGCTACTGGGCCGGCGACAACAACGTCGCCGCCGGCCTCGACAGCCC
TCGACGCGAGTTGATCGAGTTCAGCCAACTGTCGTTGACACCGCCACCCAAACCCATGGCGGTCGCCAGTCAGACCGTTC
CAGGAAAACCGGCCGTGGAAGTGATTCGCGGCACCGAATCCGCCGAACCCACGCACTGA

Upstream 100 bases:

>100_bases
AAATAGTTACTCGTTCATAGCTGCCTGATTGCGAAGTTATCTCGTTGGACGTCACGGGTTGTTGCAAGAGACAGAGCGCA
GCGGGAAAGGGAGAGCCGTC

Downstream 100 bases:

>100_bases
ATCGAGCAAGGATGCACCTCCATGCGCAAACGCTTTACGCCCCTGTTCCACTGGCTGCAGTTTTCCTTGCTGAGCGTGGC
TTCGATCGGCAGCGCGGCCG

Product: Flp pilus assembly CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; Flp Pilus Assembly Protein; Pilus Assembly Protein; Flp Pilus Assembly; Pilus Assembly Protein Cpab; Signal Peptide Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; Signal Peptide Protein CpaB Like; Flp Pilus Assembly Protein CpaB-Like Protein; SAF Domain-Containing Protein

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNSRVTLGLAGILLLGAVIAGYWGLTLSRQAPAAEPVVAAPATPVDTPAPVEDPTRQPVVVLVRDIAPFVTLTAADVTVE
KLRTAPAGSLASVDQVIGRTPWRALSAGTWLTQESFEAGSPLARMIRPGERALAVAVDEVINAGGQLAPGDYVDVLLFLR
KDENNPQPTAQLVVPAVRVLGVGSQMGLTNSGQPASPAHSEEEKLKQEQLRAAARSVVLAVPEPLLNRLMLASSAGVLRL
AVRSADEQQLARYWAGDNNVAAGLDSPRRELIEFSQLSLTPPPKPMAVASQTVPGKPAVEVIRGTESAEPTH

Sequences:

>Translated_312_residues
MNSRVTLGLAGILLLGAVIAGYWGLTLSRQAPAAEPVVAAPATPVDTPAPVEDPTRQPVVVLVRDIAPFVTLTAADVTVE
KLRTAPAGSLASVDQVIGRTPWRALSAGTWLTQESFEAGSPLARMIRPGERALAVAVDEVINAGGQLAPGDYVDVLLFLR
KDENNPQPTAQLVVPAVRVLGVGSQMGLTNSGQPASPAHSEEEKLKQEQLRAAARSVVLAVPEPLLNRLMLASSAGVLRL
AVRSADEQQLARYWAGDNNVAAGLDSPRRELIEFSQLSLTPPPKPMAVASQTVPGKPAVEVIRGTESAEPTH
>Mature_312_residues
MNSRVTLGLAGILLLGAVIAGYWGLTLSRQAPAAEPVVAAPATPVDTPAPVEDPTRQPVVVLVRDIAPFVTLTAADVTVE
KLRTAPAGSLASVDQVIGRTPWRALSAGTWLTQESFEAGSPLARMIRPGERALAVAVDEVINAGGQLAPGDYVDVLLFLR
KDENNPQPTAQLVVPAVRVLGVGSQMGLTNSGQPASPAHSEEEKLKQEQLRAAARSVVLAVPEPLLNRLMLASSAGVLRL
AVRSADEQQLARYWAGDNNVAAGLDSPRRELIEFSQLSLTPPPKPMAVASQTVPGKPAVEVIRGTESAEPTH

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32770; Mature: 32770

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRVTLGLAGILLLGAVIAGYWGLTLSRQAPAAEPVVAAPATPVDTPAPVEDPTRQPVV
CCCCEEHHHHHHHHHHHHHHHHHCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCE
VLVRDIAPFVTLTAADVTVEKLRTAPAGSLASVDQVIGRTPWRALSAGTWLTQESFEAGS
EHHHHHHHHHEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHCCCCCCHHCCCCCC
PLARMIRPGERALAVAVDEVINAGGQLAPGDYVDVLLFLRKDENNPQPTAQLVVPAVRVL
CHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GVGSQMGLTNSGQPASPAHSEEEKLKQEQLRAAARSVVLAVPEPLLNRLMLASSAGVLRL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCCEEH
AVRSADEQQLARYWAGDNNVAAGLDSPRRELIEFSQLSLTPPPKPMAVASQTVPGKPAVE
HHHCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHH
VIRGTESAEPTH
HHHCCCCCCCCC
>Mature Secondary Structure
MNSRVTLGLAGILLLGAVIAGYWGLTLSRQAPAAEPVVAAPATPVDTPAPVEDPTRQPVV
CCCCEEHHHHHHHHHHHHHHHHHCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCE
VLVRDIAPFVTLTAADVTVEKLRTAPAGSLASVDQVIGRTPWRALSAGTWLTQESFEAGS
EHHHHHHHHHEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHCCCCCCHHCCCCCC
PLARMIRPGERALAVAVDEVINAGGQLAPGDYVDVLLFLRKDENNPQPTAQLVVPAVRVL
CHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GVGSQMGLTNSGQPASPAHSEEEKLKQEQLRAAARSVVLAVPEPLLNRLMLASSAGVLRL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCCEEH
AVRSADEQQLARYWAGDNNVAAGLDSPRRELIEFSQLSLTPPPKPMAVASQTVPGKPAVE
HHHCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHH
VIRGTESAEPTH
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA