Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77456647
Identifier: 77456647
GI number: 77456647
Start: 480394
End: 480699
Strand: Direct
Name: 77456647
Synonym: Pfl01_0419
Alternate gene names: NA
Gene position: 480394-480699 (Clockwise)
Preceding gene: 77456645
Following gene: 77456648
Centisome position: 7.46
GC content: 52.29
Gene sequence:
>306_bases ATGACTGAGATACTTCGAAGCTCCACATTCTCGAGCTGGCTTGTGAAGCTGGCTGATAGTCGCGCCAGGATGCGTATTCA GGTGCGAATTGATCGTATGGCTGAGGGAAACTTCGGTGATGTCAAAGCCATTGACGAAGGGATCAGCGAAGCCCGAATTG ACTATGGCCCGGGATATCGGGTCTATTTCATGCAGCAAGGTCGTCAGCTGGTCATCCTCCTTTGTGGTGGAGACAAGAGC AGTCAATCTCGAGACATCAAGCAAGCCAGGCTCATCGCGGAATCCTGGCAGGAGCAAAACCCATGA
Upstream 100 bases:
>100_bases ACGCGCAGCAAATCATGGGTATGACGAGTGTAGACGCCGTATATCGGACAGAGAGAAGTCCATGTAGAGTGCGTGTAGCT CAACGGCTACACTTGCAACC
Downstream 100 bases:
>100_bases CCGAACAATTCACTCGTTGGGACTCAGCCGAGTACCTCAAGACAGAAGAGGACATGGCCAACTATCTGGATGCCTGCATG GAAGAGGCGGGGGATGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTEILRSSTFSSWLVKLADSRARMRIQVRIDRMAEGNFGDVKAIDEGISEARIDYGPGYRVYFMQQGRQLVILLCGGDKS SQSRDIKQARLIAESWQEQNP
Sequences:
>Translated_101_residues MTEILRSSTFSSWLVKLADSRARMRIQVRIDRMAEGNFGDVKAIDEGISEARIDYGPGYRVYFMQQGRQLVILLCGGDKS SQSRDIKQARLIAESWQEQNP >Mature_100_residues TEILRSSTFSSWLVKLADSRARMRIQVRIDRMAEGNFGDVKAIDEGISEARIDYGPGYRVYFMQQGRQLVILLCGGDKSS QSRDIKQARLIAESWQEQNP
Specific function: Unknown
COG id: COG3657
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014056 - InterPro: IPR009241 [H]
Pfam domain/function: PF05973 Gp49 [H]
EC number: NA
Molecular weight: Translated: 11541; Mature: 11410
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEILRSSTFSSWLVKLADSRARMRIQVRIDRMAEGNFGDVKAIDEGISEARIDYGPGYR CCCHHHHCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHCCHHHCCCCCCCCEE VYFMQQGRQLVILLCGGDKSSQSRDIKQARLIAESWQEQNP EEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TEILRSSTFSSWLVKLADSRARMRIQVRIDRMAEGNFGDVKAIDEGISEARIDYGPGYR CCHHHHCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHCCHHHCCCCCCCCEE VYFMQQGRQLVILLCGGDKSSQSRDIKQARLIAESWQEQNP EEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]