| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 255961272
Identifier: 255961272
GI number: 255961272
Start: 3964508
End: 3965452
Strand: Direct
Name: 255961272
Synonym: Pfl01_3481
Alternate gene names: NA
Gene position: 3964508-3965452 (Clockwise)
Preceding gene: 77459702
Following gene: 77459704
Centisome position: 61.58
GC content: 46.24
Gene sequence:
>945_bases ATGGCCCTACAGGTTACGACAGTTAACGAGTACACGAAGTACGACAGACAATACAAGATTACGATTGGTGATTACGTCAA CGGTGACGGGATTGAACTCATCAGCACAGAAGTTGACGCCCCCCTTCAGATTACCTTCAATATTGAGAAGTCGGCAGACA CCAAGCACAAGAATGGTAACTCCGGCTCTATCGAAATCTACAACCTGAACCCTGAACAAGCATTGTTGATGGACAGGAAA GACATCGAAGTTGCTTTGTACGTTGGGTACAACAACAGAGATGGAATGAAGCTCCTAGCCTCTGGAAACATGACCAAAGG CAAGACAGTTAAGCATGGAACAGACACCATTTCTGTTATTGAACTTGGTGAAGGTTATGTAGAGCTGACCCAAGCCCGCC TTAGTCGCATCCTATCTCCCGGTCAAACTGTGGGGGATGTCATTGAAACCATCAGAGAGTCTATGCCGGGTGTAGCCCGT GGTTCTATTGTCGGGACTAACCTGAACAGTCCGATCATTGGCAGCTACCGCTTGAGTGCTACAGCCAAAGAAGAGCTAGA CAAAATCACCAAAGCTTACGGGTTTCAATACCATGTCACTAACGGCATTTTGAACGTTACTGATGTTAATGGCCCGAACT CCAGAAGCGTAGTTGATGTTCCTATCATCAGTGTCGATACAGGCATGATTGATGAACCATTTCAAACCACGGAATACCTG AAGCTTCCTAAAGGCGATAAGCGTGCACGCTATGGCGTTCAAGTTGTAACAGCCCTAGACGCAACCATTGTGCCTAGTTC TGTAGTCAAGATTGAATCTGAAAAAGTTACAGGCTACTACCGCGTGAATACTGCTCGTTATACAGGTGACTTCCGTGGTA ATGACTGGCAGGTTGAGATTCAGTGCTCTGAAATGACACCTGATGACATTGACGTCCTACAGTAA
Upstream 100 bases:
>100_bases CGTAAACAATTCTGCAAAGCCCAGTGCAGAACCAACCACCACAAGCAAAACGCTTTCACAGTGGCTGTGAGGCTGTTTGC TACACATAGAGGATATAGAT
Downstream 100 bases:
>100_bases CAAAACACTCCTACGTGCAAGCCCGCACACAATCCCATAAAAAAAAACCGATAAGGAAACCCATTCATGGCAATCAAGAC CAAGAAACTAACCATTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MALQVTTVNEYTKYDRQYKITIGDYVNGDGIELISTEVDAPLQITFNIEKSADTKHKNGNSGSIEIYNLNPEQALLMDRK DIEVALYVGYNNRDGMKLLASGNMTKGKTVKHGTDTISVIELGEGYVELTQARLSRILSPGQTVGDVIETIRESMPGVAR GSIVGTNLNSPIIGSYRLSATAKEELDKITKAYGFQYHVTNGILNVTDVNGPNSRSVVDVPIISVDTGMIDEPFQTTEYL KLPKGDKRARYGVQVVTALDATIVPSSVVKIESEKVTGYYRVNTARYTGDFRGNDWQVEIQCSEMTPDDIDVLQ
Sequences:
>Translated_314_residues MALQVTTVNEYTKYDRQYKITIGDYVNGDGIELISTEVDAPLQITFNIEKSADTKHKNGNSGSIEIYNLNPEQALLMDRK DIEVALYVGYNNRDGMKLLASGNMTKGKTVKHGTDTISVIELGEGYVELTQARLSRILSPGQTVGDVIETIRESMPGVAR GSIVGTNLNSPIIGSYRLSATAKEELDKITKAYGFQYHVTNGILNVTDVNGPNSRSVVDVPIISVDTGMIDEPFQTTEYL KLPKGDKRARYGVQVVTALDATIVPSSVVKIESEKVTGYYRVNTARYTGDFRGNDWQVEIQCSEMTPDDIDVLQ >Mature_313_residues ALQVTTVNEYTKYDRQYKITIGDYVNGDGIELISTEVDAPLQITFNIEKSADTKHKNGNSGSIEIYNLNPEQALLMDRKD IEVALYVGYNNRDGMKLLASGNMTKGKTVKHGTDTISVIELGEGYVELTQARLSRILSPGQTVGDVIETIRESMPGVARG SIVGTNLNSPIIGSYRLSATAKEELDKITKAYGFQYHVTNGILNVTDVNGPNSRSVVDVPIISVDTGMIDEPFQTTEYLK LPKGDKRARYGVQVVTALDATIVPSSVVKIESEKVTGYYRVNTARYTGDFRGNDWQVEIQCSEMTPDDIDVLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34576; Mature: 34445
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQVTTVNEYTKYDRQYKITIGDYVNGDGIELISTEVDAPLQITFNIEKSADTKHKNGN CEEEEEECHHHHCCCCEEEEEECCEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCC SGSIEIYNLNPEQALLMDRKDIEVALYVGYNNRDGMKLLASGNMTKGKTVKHGTDTISVI CCEEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEECCCCEEEEE ELGEGYVELTQARLSRILSPGQTVGDVIETIRESMPGVARGSIVGTNLNSPIIGSYRLSA EECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEECC TAKEELDKITKAYGFQYHVTNGILNVTDVNGPNSRSVVDVPIISVDTGMIDEPFQTTEYL CHHHHHHHHHHHHCEEEEEECCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEE KLPKGDKRARYGVQVVTALDATIVPSSVVKIESEKVTGYYRVNTARYTGDFRGNDWQVEI ECCCCCCCHHCCEEEEEEECCCCCCCEEEEEECCEEEEEEEEEEEEEECCCCCCCEEEEE QCSEMTPDDIDVLQ EECCCCCCCHHCCC >Mature Secondary Structure ALQVTTVNEYTKYDRQYKITIGDYVNGDGIELISTEVDAPLQITFNIEKSADTKHKNGN EEEEEECHHHHCCCCEEEEEECCEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCC SGSIEIYNLNPEQALLMDRKDIEVALYVGYNNRDGMKLLASGNMTKGKTVKHGTDTISVI CCEEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEECCCCEEEEE ELGEGYVELTQARLSRILSPGQTVGDVIETIRESMPGVARGSIVGTNLNSPIIGSYRLSA EECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEECC TAKEELDKITKAYGFQYHVTNGILNVTDVNGPNSRSVVDVPIISVDTGMIDEPFQTTEYL CHHHHHHHHHHHHCEEEEEECCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEE KLPKGDKRARYGVQVVTALDATIVPSSVVKIESEKVTGYYRVNTARYTGDFRGNDWQVEI ECCCCCCCHHCCEEEEEEECCCCCCCEEEEEECCEEEEEEEEEEEEEECCCCCCCEEEEE QCSEMTPDDIDVLQ EECCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA