| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is 77454858
Identifier: 77454858
GI number: 77454858
Start: 263179
End: 263673
Strand: Direct
Name: 77454858
Synonym: pREL1_0291
Alternate gene names: NA
Gene position: 263179-263673 (Clockwise)
Preceding gene: 77454857
Following gene: 77454860
Centisome position: 96.91
GC content: 66.26
Gene sequence:
>495_bases ATGGGGTCGGATCTGTCGAGGTCGACGGTGGTCGAGGTCACTCGCAAGTACGCCAAGCTGTACCTGGCGGCGTCGAAGAA GGACAAGGGCCGGATGCTCGATGAGTTCTGCGAGCTGACCGGTCTGTCCCGCAGCCGCGCCAGGCATGCTCTGGTGGAGG CCGGCTCGCGGGCGCCGAACGTGGTGCGGATGGATCGGCGCAGGTCTCGGCCCCGGAAGTACAGTGCCGACGCACGCGAG GTTCTCAAACACCTGTGGGTCCTGTCCGGGGGCAGTTGTGGTCCGTATCTGGCTGCGCAGATGGTCCTGCTGCTGGATTC GCTGGAGGCCCACGGCGAGCTCGTCGACGGTCGCGGCCACTACAGCCCGTCGGTGCGGACCGAGTTGGAGTCGATGAGCG GTGCGACGATCGACCGGTACCTGCAGGCGATCAAGGCCACCGCCTCGTTGCGGGGGTTTTCCGCCCTTCCGGATTTCCGG CCCTTCCGGATTTAG
Upstream 100 bases:
>100_bases GACAAGGTCTCGGCAATCATCACGTATGTCAGCCGCGAACGGGACTTGGTTCCTCACGTACTGGTAGCCGCGAAGCCGGG GCCGGGTCGACGATGAGCGG
Downstream 100 bases:
>100_bases AGTGCGTTGATCCGGTTCTGGAGCTGTCCGGAGTGGATGAGTGACCGCAAGATGAATCACCCTAGGTTCTGTGCCGCCTC CAGTTGGGGCTGATCCTCGG
Product: putative transposase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MGSDLSRSTVVEVTRKYAKLYLAASKKDKGRMLDEFCELTGLSRSRARHALVEAGSRAPNVVRMDRRRSRPRKYSADARE VLKHLWVLSGGSCGPYLAAQMVLLLDSLEAHGELVDGRGHYSPSVRTELESMSGATIDRYLQAIKATASLRGFSALPDFR PFRI
Sequences:
>Translated_164_residues MGSDLSRSTVVEVTRKYAKLYLAASKKDKGRMLDEFCELTGLSRSRARHALVEAGSRAPNVVRMDRRRSRPRKYSADARE VLKHLWVLSGGSCGPYLAAQMVLLLDSLEAHGELVDGRGHYSPSVRTELESMSGATIDRYLQAIKATASLRGFSALPDFR PFRI >Mature_163_residues GSDLSRSTVVEVTRKYAKLYLAASKKDKGRMLDEFCELTGLSRSRARHALVEAGSRAPNVVRMDRRRSRPRKYSADAREV LKHLWVLSGGSCGPYLAAQMVLLLDSLEAHGELVDGRGHYSPSVRTELESMSGATIDRYLQAIKATASLRGFSALPDFRP FRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18243; Mature: 18112
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSDLSRSTVVEVTRKYAKLYLAASKKDKGRMLDEFCELTGLSRSRARHALVEAGSRAPN CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC VVRMDRRRSRPRKYSADAREVLKHLWVLSGGSCGPYLAAQMVLLLDSLEAHGELVDGRGH HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCC YSPSVRTELESMSGATIDRYLQAIKATASLRGFSALPDFRPFRI CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GSDLSRSTVVEVTRKYAKLYLAASKKDKGRMLDEFCELTGLSRSRARHALVEAGSRAPN CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC VVRMDRRRSRPRKYSADAREVLKHLWVLSGGSCGPYLAAQMVLLLDSLEAHGELVDGRGH HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCC YSPSVRTELESMSGATIDRYLQAIKATASLRGFSALPDFRPFRI CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA