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The map label for this gene is dapB [H]

Identifier: 75674400

GI number: 75674400

Start: 231747

End: 232613

Strand: Direct

Name: dapB [H]

Synonym: Nwi_0201

Alternate gene names: 75674400

Gene position: 231747-232613 (Clockwise)

Preceding gene: 75674399

Following gene: 75674401

Centisome position: 6.81

GC content: 64.13

Gene sequence:

>867_bases
TTGCCGCGAAACGCAGCCCCCGCTATACCCACAGAAGCATTCGAGGACTCGGCCGTGGCTGACATGCGTTTGATTGTTGC
AGGGGCAGGCGGCCGGATGGGCCGCGCCCTGGTGCGCGCGATCGCCGAAACCGATGGCGCGGTGCTGGCGGGCGCGCTCG
AGGCGCCGGAATCCGAGTTGATCGGGAAGGACGCCAGCGTTCTGGCCGGCCTTCCCGCCAGCGGAATCGAAGTGTCGGCG
GATCTCTGGTCATTGTCGGCGAAAGCCGACGGTATCCTGGATTTTACGGTTCCGGCCGCGACCATCGCGAATGTGGCCGT
CGCCGCCGAGCGCGGCCTGATTCACGTCATCGGCACCACCGGCCTTTCGGCGTCGGACATGGCTGTGATCCGGAGCGTGA
CGTCACGCACGGCGGTCGTGCAGTCGGGCAATATGAGTCTAGGCGTCAACCTGCTTGCTGCACTGGTAAAGCGCATGGCG
CAGGCACTCGACGAAAGTTTCGATGTTGAAGTTCTCGAGATGCATCACAGGGCCAAGATTGATGCGCCTTCCGGCACAGC
GTTGATGTTGGGACAGGCGGCGGCTGACGGCCGCAAGGTCGGTCTGGATCAGCGCGCGGTGCGCGGCCGGGACGGCCTTA
CCGGCGCCCGCAAGGCCGGCGACATCGGTTTTGCCTCGCTTCGGGGAGGCACCGTGTCCGGAGATCACAGCGTCATCTTC
GCGGGTCCATATGAGCGCATCACATTGTCGCATCATGCCGAGGACCGGATGATTTTCGCGCATGGCGCATTGAAGGCCGC
GAAGTGGGCGTTCGGTAAAGAGCCCGGCCTCTACTCGATGTCAGACGTGCTCGGGCTGGATGTTTAG

Upstream 100 bases:

>100_bases
TGAAGAAGATGGTACGACAGTTGATCACGCTCGCCGGGAATATGCAGTAGGCCGTGCTTGATAGGAACGGCATCGCGCAA
CGGATGCGGGACCTGATTGG

Downstream 100 bases:

>100_bases
CATTGCGGTTATCACAGCGTTTTCGAGCGAAGCCTATCCTCCGGCTTGATCCGGGGATGCATATCGTTTCGTGCGAAGAC
GCCGCGTCAAATCAAGATCC

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MPRNAAPAIPTEAFEDSAVADMRLIVAGAGGRMGRALVRAIAETDGAVLAGALEAPESELIGKDASVLAGLPASGIEVSA
DLWSLSAKADGILDFTVPAATIANVAVAAERGLIHVIGTTGLSASDMAVIRSVTSRTAVVQSGNMSLGVNLLAALVKRMA
QALDESFDVEVLEMHHRAKIDAPSGTALMLGQAAADGRKVGLDQRAVRGRDGLTGARKAGDIGFASLRGGTVSGDHSVIF
AGPYERITLSHHAEDRMIFAHGALKAAKWAFGKEPGLYSMSDVLGLDV

Sequences:

>Translated_288_residues
MPRNAAPAIPTEAFEDSAVADMRLIVAGAGGRMGRALVRAIAETDGAVLAGALEAPESELIGKDASVLAGLPASGIEVSA
DLWSLSAKADGILDFTVPAATIANVAVAAERGLIHVIGTTGLSASDMAVIRSVTSRTAVVQSGNMSLGVNLLAALVKRMA
QALDESFDVEVLEMHHRAKIDAPSGTALMLGQAAADGRKVGLDQRAVRGRDGLTGARKAGDIGFASLRGGTVSGDHSVIF
AGPYERITLSHHAEDRMIFAHGALKAAKWAFGKEPGLYSMSDVLGLDV
>Mature_287_residues
PRNAAPAIPTEAFEDSAVADMRLIVAGAGGRMGRALVRAIAETDGAVLAGALEAPESELIGKDASVLAGLPASGIEVSAD
LWSLSAKADGILDFTVPAATIANVAVAAERGLIHVIGTTGLSASDMAVIRSVTSRTAVVQSGNMSLGVNLLAALVKRMAQ
ALDESFDVEVLEMHHRAKIDAPSGTALMLGQAAADGRKVGLDQRAVRGRDGLTGARKAGDIGFASLRGGTVSGDHSVIFA
GPYERITLSHHAEDRMIFAHGALKAAKWAFGKEPGLYSMSDVLGLDV

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=268, Percent_Identity=42.1641791044776, Blast_Score=201, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 29559; Mature: 29428

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRNAAPAIPTEAFEDSAVADMRLIVAGAGGRMGRALVRAIAETDGAVLAGALEAPESEL
CCCCCCCCCCCHHCCCCHHHEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHH
IGKDASVLAGLPASGIEVSADLWSLSAKADGILDFTVPAATIANVAVAAERGLIHVIGTT
CCCCCHHHCCCCCCCCEEEHHHEEECCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEECC
GLSASDMAVIRSVTSRTAVVQSGNMSLGVNLLAALVKRMAQALDESFDVEVLEMHHRAKI
CCCHHHHHHHHHHHHHHEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
DAPSGTALMLGQAAADGRKVGLDQRAVRGRDGLTGARKAGDIGFASLRGGTVSGDHSVIF
CCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCEECCCCCEEE
AGPYERITLSHHAEDRMIFAHGALKAAKWAFGKEPGLYSMSDVLGLDV
ECCCCEEEEECCCCCCEEEECCCHHHHHHCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
PRNAAPAIPTEAFEDSAVADMRLIVAGAGGRMGRALVRAIAETDGAVLAGALEAPESEL
CCCCCCCCCCHHCCCCHHHEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHH
IGKDASVLAGLPASGIEVSADLWSLSAKADGILDFTVPAATIANVAVAAERGLIHVIGTT
CCCCCHHHCCCCCCCCEEEHHHEEECCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEECC
GLSASDMAVIRSVTSRTAVVQSGNMSLGVNLLAALVKRMAQALDESFDVEVLEMHHRAKI
CCCHHHHHHHHHHHHHHEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
DAPSGTALMLGQAAADGRKVGLDQRAVRGRDGLTGARKAGDIGFASLRGGTVSGDHSVIF
CCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCEECCCCCEEE
AGPYERITLSHHAEDRMIFAHGALKAAKWAFGKEPGLYSMSDVLGLDV
ECCCCEEEEECCCCCCEEEECCCHHHHHHCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA