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The map label for this gene is yhbH [C]

Identifier: 75674377

GI number: 75674377

Start: 203809

End: 204405

Strand: Direct

Name: yhbH [C]

Synonym: Nwi_0178

Alternate gene names: 75674377

Gene position: 203809-204405 (Clockwise)

Preceding gene: 75674376

Following gene: 75674378

Centisome position: 5.99

GC content: 62.98

Gene sequence:

>597_bases
ATGACACTTCGAATTTCGGGCAAGAGCATCAATGTCGGCGAGGCGCTGCGAGGGCGTCTCAACAGCCGCACCGACGAAGT
CCTCCGGAAATATTTCGATGGCCAGTATTCGGGCCACATCACGCTGAGCAAGGACGGCTTCGGCTTTCGCACCGACTGCG
CGCTGCATCTGGATTCCGGAGTGACGCTCGAAGCCGAATCGAATGCCGCGGATGCCTATGCCAGCGCCGACCAGGCGCTG
TTGCAGATCGAAAAGCGGCTGCGCCGCTACAAGAGCCGTCTCAAGGATCACTCGGCGCGCAAGGCGCGCGCAGCCGCGGA
AACGATCGCCGGGCTCGACGCGCCGAGCTACGTGATCGAGGCGCCGGCGATGAACGGCGAGGGCGAGGTCACCGCTTTCA
ATCCGGTGATCATCGCGGAAACCATCACCTCGCTGAGGCGGCTCTCGGTCAGCGAAGCGGTGATGGAACTCGATTTCACC
GGCGCGCCCGTATTGGTGTTTCAGCATGGCTCCAGCGGCCGCGTGAACATGATCTATCGCAGGCCTGATGGAAACGTGGG
CTGGATCGACCCGCCGGCCGTCAACGGCTCTGCCTGA

Upstream 100 bases:

>100_bases
CCAGGAAGCCGCCGAACCGCCCGCGCGATGCCGCACCGGCTTGATTGCGCAACCGCGACGCCCGATAATCACTTCCCACT
CATGATCGATGAGGCTTGTC

Downstream 100 bases:

>100_bases
CCCGCCGCCATTGACGCCTGGGACGGCGATCCATATGGTCCGCGGCCTTCGCGCCCGGTTTTCCACCGGCCCGGACGAAA
GTCCGGGATTTGGCATCGGG

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: ORF203 [H]

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTLRISGKSINVGEALRGRLNSRTDEVLRKYFDGQYSGHITLSKDGFGFRTDCALHLDSGVTLEAESNAADAYASADQAL
LQIEKRLRRYKSRLKDHSARKARAAAETIAGLDAPSYVIEAPAMNGEGEVTAFNPVIIAETITSLRRLSVSEAVMELDFT
GAPVLVFQHGSSGRVNMIYRRPDGNVGWIDPPAVNGSA

Sequences:

>Translated_198_residues
MTLRISGKSINVGEALRGRLNSRTDEVLRKYFDGQYSGHITLSKDGFGFRTDCALHLDSGVTLEAESNAADAYASADQAL
LQIEKRLRRYKSRLKDHSARKARAAAETIAGLDAPSYVIEAPAMNGEGEVTAFNPVIIAETITSLRRLSVSEAVMELDFT
GAPVLVFQHGSSGRVNMIYRRPDGNVGWIDPPAVNGSA
>Mature_197_residues
TLRISGKSINVGEALRGRLNSRTDEVLRKYFDGQYSGHITLSKDGFGFRTDCALHLDSGVTLEAESNAADAYASADQALL
QIEKRLRRYKSRLKDHSARKARAAAETIAGLDAPSYVIEAPAMNGEGEVTAFNPVIIAETITSLRRLSVSEAVMELDFTG
APVLVFQHGSSGRVNMIYRRPDGNVGWIDPPAVNGSA

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21455; Mature: 21324

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRISGKSINVGEALRGRLNSRTDEVLRKYFDGQYSGHITLSKDGFGFRTDCALHLDSG
CEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECCC
VTLEAESNAADAYASADQALLQIEKRLRRYKSRLKDHSARKARAAAETIAGLDAPSYVIE
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
APAMNGEGEVTAFNPVIIAETITSLRRLSVSEAVMELDFTGAPVLVFQHGSSGRVNMIYR
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEE
RPDGNVGWIDPPAVNGSA
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLRISGKSINVGEALRGRLNSRTDEVLRKYFDGQYSGHITLSKDGFGFRTDCALHLDSG
EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECCC
VTLEAESNAADAYASADQALLQIEKRLRRYKSRLKDHSARKARAAAETIAGLDAPSYVIE
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
APAMNGEGEVTAFNPVIIAETITSLRRLSVSEAVMELDFTGAPVLVFQHGSSGRVNMIYR
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEE
RPDGNVGWIDPPAVNGSA
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1991712; 12597275 [H]