| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is yjeE [C]
Identifier: 75674245
GI number: 75674245
Start: 52804
End: 54327
Strand: Direct
Name: yjeE [C]
Synonym: Nwi_0046
Alternate gene names: 75674245
Gene position: 52804-54327 (Clockwise)
Preceding gene: 75674244
Following gene: 75674246
Centisome position: 1.55
GC content: 67.26
Gene sequence:
>1524_bases ATGAGCGAGCCGTCGAGATTCGCGACCGCGCTCGTCAACGAGACCGCGACCGCGCATCTGATGGCCGACCTCGCACTGCT GATCGGTCCCGGCGACGTCATCACGCTGTCGGGCGATCTCGGCGCGGGCAAGACCGCGGCCGCCCGCGCCTTGATCCGGT ATCTGGCCGGCGACGACACGATCGAGGTGCCGAGCCCGACCTTCACGCTGGCGCAGCATTACGATCTGCCGCCGCATCCC CTGCTTCACGCCGATCTCTATCGCATCAGCGGTCCCGGCGAACTGGACGAGATCGGCCTCGCGCCGCTGCCCGAGGACGC GGTGGTCCTGATCGAATGGCCGGAGCGCGCCGCCGGCGGCCTGCCCGCCGACCGGATCGACATCGCCATCAGCCATCGCC CGGCGCTCGGATCAGCGGCGCGCTCAGCCGAGATCACCGGCTACGGCAAGGCCGCATCGCAAGTCGCGCGGCTGGCGTCG CTGCGGCGGTTTCTTGACGATGCCGGTTATCTCGACGCAAGACGGCAGCGCATGGCGGGCGACGCCTCGACGCGCTCATA TGCCCGGTTGATCCGCGACGACGCCAGCTTCATCCTCATGAACGCGCCGAAGCGGCCCGACGGACCCGCGATCCACGACG GCAAGTCCTACAGCGCGGCGGTGCACCTTGCCGAGGACATCAAGCCCTTCGTCGCCATCGCGCACGGCCTGCGCGGTCAG GGCTTTTCCGCGCCGGAGATCCATCATGCCGATCTGGAGTCGGGATTCCTGATCACCGAGGATTTCGGCAGCGCCGGCTT TGTCGAGGGCACGCCGCCGGCGCCGATCGTCGAGCGCTATCAGGCGGCGACCGACCTGCTCGCCGCGCTGCACGGCCGGA CGCTGCCGGACACGCTTCCCTTGACGGCGGATACGGCCTACGCGATTCCCGCGTTCGACCTTGAGGCGATGCTGATCGAG GTCGGCCTGATGCTGGACTGGTATCTGATCGACCGCGGCATTGAACCAGACGAAGGCCTGCGCGCGGAATTCCTGGCGAT ATGGCGCGCGTTGCTGGCGAAGCCGGATGCCGCGTCCAGAACCTGGGTGTTGCGTGACTTCCACTCGCCCAACCTGATCT GGCTGGAACAGCGGCGCGATATCGGAAAGGTCGGCATCATCGACTTTCAGGACACCGTGCTCGGTCCCGACGCCTATGAT CTGGTCTCGCTGTTGCAGGATGCGCGCGTGGACGTCCCCGAATCGATCGAACTTGCCTTGCTCGCCCGTTACGCGAAGGC GCGGCTGGAGTGTGAAGCGCATTTCGATCCCGCCGGTTTCGCCGAGACGTATGCCATCATCTCGGCGCAACGCAACACCC GGCTGCTCGGCACGTTCGCGCGGCTCAATCGGCGCGACGGCAAACCGCACTATCTGCGGCATCAACCCCGGATCTGGACC TATCTCACCCGCTCGCTCGCGCACCCGGCCTTGTCGGCGGCGAGAGCGTGGTACCGGAATCACGTCCCGCCTCCCGCGGG TTGA
Upstream 100 bases:
>100_bases TCCACGGCGGACGCGTGCATTTCGATCCCGCCATCAAGAGCGGGACCAGGGTCGTTTGCGACTTTCCGCTCGACCGGGGC GCCCACCGGAACGCCGCCGA
Downstream 100 bases:
>100_bases ACCATTTTGTTTTACGCCTTTTTAGAAGTCGCGGGTGTAGCTTCACGACGCCGGTTCTATCCCTCGGATCGCGGCACAGT CCTCCTCCCAAGGCGGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MSEPSRFATALVNETATAHLMADLALLIGPGDVITLSGDLGAGKTAAARALIRYLAGDDTIEVPSPTFTLAQHYDLPPHP LLHADLYRISGPGELDEIGLAPLPEDAVVLIEWPERAAGGLPADRIDIAISHRPALGSAARSAEITGYGKAASQVARLAS LRRFLDDAGYLDARRQRMAGDASTRSYARLIRDDASFILMNAPKRPDGPAIHDGKSYSAAVHLAEDIKPFVAIAHGLRGQ GFSAPEIHHADLESGFLITEDFGSAGFVEGTPPAPIVERYQAATDLLAALHGRTLPDTLPLTADTAYAIPAFDLEAMLIE VGLMLDWYLIDRGIEPDEGLRAEFLAIWRALLAKPDAASRTWVLRDFHSPNLIWLEQRRDIGKVGIIDFQDTVLGPDAYD LVSLLQDARVDVPESIELALLARYAKARLECEAHFDPAGFAETYAIISAQRNTRLLGTFARLNRRDGKPHYLRHQPRIWT YLTRSLAHPALSAARAWYRNHVPPPAG
Sequences:
>Translated_507_residues MSEPSRFATALVNETATAHLMADLALLIGPGDVITLSGDLGAGKTAAARALIRYLAGDDTIEVPSPTFTLAQHYDLPPHP LLHADLYRISGPGELDEIGLAPLPEDAVVLIEWPERAAGGLPADRIDIAISHRPALGSAARSAEITGYGKAASQVARLAS LRRFLDDAGYLDARRQRMAGDASTRSYARLIRDDASFILMNAPKRPDGPAIHDGKSYSAAVHLAEDIKPFVAIAHGLRGQ GFSAPEIHHADLESGFLITEDFGSAGFVEGTPPAPIVERYQAATDLLAALHGRTLPDTLPLTADTAYAIPAFDLEAMLIE VGLMLDWYLIDRGIEPDEGLRAEFLAIWRALLAKPDAASRTWVLRDFHSPNLIWLEQRRDIGKVGIIDFQDTVLGPDAYD LVSLLQDARVDVPESIELALLARYAKARLECEAHFDPAGFAETYAIISAQRNTRLLGTFARLNRRDGKPHYLRHQPRIWT YLTRSLAHPALSAARAWYRNHVPPPAG >Mature_506_residues SEPSRFATALVNETATAHLMADLALLIGPGDVITLSGDLGAGKTAAARALIRYLAGDDTIEVPSPTFTLAQHYDLPPHPL LHADLYRISGPGELDEIGLAPLPEDAVVLIEWPERAAGGLPADRIDIAISHRPALGSAARSAEITGYGKAASQVARLASL RRFLDDAGYLDARRQRMAGDASTRSYARLIRDDASFILMNAPKRPDGPAIHDGKSYSAAVHLAEDIKPFVAIAHGLRGQG FSAPEIHHADLESGFLITEDFGSAGFVEGTPPAPIVERYQAATDLLAALHGRTLPDTLPLTADTAYAIPAFDLEAMLIEV GLMLDWYLIDRGIEPDEGLRAEFLAIWRALLAKPDAASRTWVLRDFHSPNLIWLEQRRDIGKVGIIDFQDTVLGPDAYDL VSLLQDARVDVPESIELALLARYAKARLECEAHFDPAGFAETYAIISAQRNTRLLGTFARLNRRDGKPHYLRHQPRIWTY LTRSLAHPALSAARAWYRNHVPPPAG
Specific function: Unknown
COG id: COG3178
COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=150, Percent_Identity=36.6666666666667, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 55225; Mature: 55094
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPSRFATALVNETATAHLMADLALLIGPGDVITLSGDLGAGKTAAARALIRYLAGDDT CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCE IEVPSPTFTLAQHYDLPPHPLLHADLYRISGPGELDEIGLAPLPEDAVVLIEWPERAAGG EECCCCCEEHHHCCCCCCCCCHHHHHEEECCCCCHHHCCCCCCCCCCEEEEECCCHHCCC LPADRIDIAISHRPALGSAARSAEITGYGKAASQVARLASLRRFLDDAGYLDARRQRMAG CCCCCEEEEEECCCCCCCHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC DASTRSYARLIRDDASFILMNAPKRPDGPAIHDGKSYSAAVHLAEDIKPFVAIAHGLRGQ CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHHHHCCCCC GFSAPEIHHADLESGFLITEDFGSAGFVEGTPPAPIVERYQAATDLLAALHGRTLPDTLP CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC LTADTAYAIPAFDLEAMLIEVGLMLDWYLIDRGIEPDEGLRAEFLAIWRALLAKPDAASR CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC TWVLRDFHSPNLIWLEQRRDIGKVGIIDFQDTVLGPDAYDLVSLLQDARVDVPESIELAL EEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH LARYAKARLECEAHFDPAGFAETYAIISAQRNTRLLGTFARLNRRDGKPHYLRHQPRIWT HHHHHHHHEEEEECCCCCCHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCHHCCCCHHHH YLTRSLAHPALSAARAWYRNHVPPPAG HHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SEPSRFATALVNETATAHLMADLALLIGPGDVITLSGDLGAGKTAAARALIRYLAGDDT CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCE IEVPSPTFTLAQHYDLPPHPLLHADLYRISGPGELDEIGLAPLPEDAVVLIEWPERAAGG EECCCCCEEHHHCCCCCCCCCHHHHHEEECCCCCHHHCCCCCCCCCCEEEEECCCHHCCC LPADRIDIAISHRPALGSAARSAEITGYGKAASQVARLASLRRFLDDAGYLDARRQRMAG CCCCCEEEEEECCCCCCCHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC DASTRSYARLIRDDASFILMNAPKRPDGPAIHDGKSYSAAVHLAEDIKPFVAIAHGLRGQ CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHHHHCCCCC GFSAPEIHHADLESGFLITEDFGSAGFVEGTPPAPIVERYQAATDLLAALHGRTLPDTLP CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC LTADTAYAIPAFDLEAMLIEVGLMLDWYLIDRGIEPDEGLRAEFLAIWRALLAKPDAASR CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC TWVLRDFHSPNLIWLEQRRDIGKVGIIDFQDTVLGPDAYDLVSLLQDARVDVPESIELAL EEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH LARYAKARLECEAHFDPAGFAETYAIISAQRNTRLLGTFARLNRRDGKPHYLRHQPRIWT HHHHHHHHEEEEECCCCCCHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCHHCCCCHHHH YLTRSLAHPALSAARAWYRNHVPPPAG HHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]