| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674222
Identifier: 75674222
GI number: 75674222
Start: 24107
End: 24772
Strand: Direct
Name: 75674222
Synonym: Nwi_0023
Alternate gene names: NA
Gene position: 24107-24772 (Clockwise)
Preceding gene: 75674221
Following gene: 75674223
Centisome position: 0.71
GC content: 67.42
Gene sequence:
>666_bases ATGCTCGCGATCGCCGACCCGGCAGATCTGGATCAGGGGCCGCGGACCAACAGGTCGGCGACGGCCCGGATGTGCGCGGT CACCCGGCAGGTGCGCCCGATCGGCGAGTTGATCCGGTTCGTGGTATCACCCTCGGGCGAGGTGATCGCGGACCTGAAGC GCAAGCTGCCTGGCCGGGGCTTGTGGATTTCGGCCTCGCACGCCGCTGTTGCGGAGGCGGTCCGCCGTAACCAGTTCAGC AGGGGCTTCAAGCGGGACGTCCGGGTGCCGGCCTCGCTGGCTGAGGACACCCGGCAGTTGATGGTCCGCAGCGCGATGGA CGCGCTGGCCATGGTCGCCAAGGCCGGTCAGGTCGTTGCGGGATTCGCGAAAGTGGAGGACGCGCTGCTTCGTCGTCAGG CGGTGGCCCTGATCCACGCGGCCGACGGCGCCGCCGACGGAATCCGGAAACTGGACGCCGCCGTCAGGAAAATCGCCGGC CAATCCGGGGAAGCTCGGGAAATCCCGGTTGTCACCGCCCTGAACTCGGCAGAATTGGATTTGGCACTTGGCAGGGCAAA TGTGATACATGCAGCCCTGCTCGCAGGTCCGGCGGGCAGGACGTTCCTGCAGCGCAGCCAGACACTGGTTCGATACCAGG ATGGCGGGCAGCGGCAGGACAGCTGA
Upstream 100 bases:
>100_bases TTTCCGCCCGCATCCCGCTCTAAAATGTTGGAATCGATCACGTTCATGGTTTTGGATCGATTCGATCCAAAACCATCGTG ATCTGGGAGACGCTGAGGAC
Downstream 100 bases:
>100_bases ACAAGGCAAGAATTCTAACGACACGACCCGTGCGAACGCGTACGGCGCAACAAGATTGGGACTGCTGAATGGTTGATACG AAAAATCCTGGCGACAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MLAIADPADLDQGPRTNRSATARMCAVTRQVRPIGELIRFVVSPSGEVIADLKRKLPGRGLWISASHAAVAEAVRRNQFS RGFKRDVRVPASLAEDTRQLMVRSAMDALAMVAKAGQVVAGFAKVEDALLRRQAVALIHAADGAADGIRKLDAAVRKIAG QSGEAREIPVVTALNSAELDLALGRANVIHAALLAGPAGRTFLQRSQTLVRYQDGGQRQDS
Sequences:
>Translated_221_residues MLAIADPADLDQGPRTNRSATARMCAVTRQVRPIGELIRFVVSPSGEVIADLKRKLPGRGLWISASHAAVAEAVRRNQFS RGFKRDVRVPASLAEDTRQLMVRSAMDALAMVAKAGQVVAGFAKVEDALLRRQAVALIHAADGAADGIRKLDAAVRKIAG QSGEAREIPVVTALNSAELDLALGRANVIHAALLAGPAGRTFLQRSQTLVRYQDGGQRQDS >Mature_221_residues MLAIADPADLDQGPRTNRSATARMCAVTRQVRPIGELIRFVVSPSGEVIADLKRKLPGRGLWISASHAAVAEAVRRNQFS RGFKRDVRVPASLAEDTRQLMVRSAMDALAMVAKAGQVVAGFAKVEDALLRRQAVALIHAADGAADGIRKLDAAVRKIAG QSGEAREIPVVTALNSAELDLALGRANVIHAALLAGPAGRTFLQRSQTLVRYQDGGQRQDS
Specific function: Unknown
COG id: COG2740
COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23547; Mature: 23547
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIADPADLDQGPRTNRSATARMCAVTRQVRPIGELIRFVVSPSGEVIADLKRKLPGRG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC LWISASHAAVAEAVRRNQFSRGFKRDVRVPASLAEDTRQLMVRSAMDALAMVAKAGQVVA EEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFAKVEDALLRRQAVALIHAADGAADGIRKLDAAVRKIAGQSGEAREIPVVTALNSAELD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHH LALGRANVIHAALLAGPAGRTFLQRSQTLVRYQDGGQRQDS HHHCHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCC >Mature Secondary Structure MLAIADPADLDQGPRTNRSATARMCAVTRQVRPIGELIRFVVSPSGEVIADLKRKLPGRG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC LWISASHAAVAEAVRRNQFSRGFKRDVRVPASLAEDTRQLMVRSAMDALAMVAKAGQVVA EEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFAKVEDALLRRQAVALIHAADGAADGIRKLDAAVRKIAGQSGEAREIPVVTALNSAELD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHH LALGRANVIHAALLAGPAGRTFLQRSQTLVRYQDGGQRQDS HHHCHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA