| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is lnt [H]
Identifier: 75674217
GI number: 75674217
Start: 18113
End: 19720
Strand: Direct
Name: lnt [H]
Synonym: Nwi_0018
Alternate gene names: 75674217
Gene position: 18113-19720 (Clockwise)
Preceding gene: 75674216
Following gene: 75674218
Centisome position: 0.53
GC content: 64.49
Gene sequence:
>1608_bases GTGAGCCTGAGCATCGCGGGCAGCGCCAGGACGGCGGGTGTTGCCGTCACGTTGTCATGGGGATGGAAGCGCGCCTTCGT TGCGCTTGCCTCCGGCGCAGCCTCATCGCTTGCCATGGAGCCCTTCAACGCCTGGCCGTTGCTGTTCGTCACCTTTCCGG TCGCAACCTGGCTGATCGACGGCTCCGCCGGCCGTCTGCGCGGCGTGCCGGCCGCAGCGCTTGCCGGCTGGCTGTTCGGA TTCGGCTATTTCGTCCCCGGCCTCTACTGGATCGGCAACGCCTTCCTTGTTGATGCGCAGACCTTCGCATGGCTGATACC GTTCGCCGTCCTTGGCCTGCCGGCCTATCTCGCGCTCTTTACGGCGCTCGGTTTCGCCCTCGCGCGCTTTATCTGGACCA CGGACGCCTCGCGCATTCTCGCGCTCGCCGCCGCGCTGACGATCAGTGAATGGCTGCGCGGACACGTCCTGACAGGCTTC CCGTGGAATGCATTCGGCTACGCGCTGACGGAGCCGCTGGCGCTGGCGCAAACCGCCTCGCTGATCGGATTGTGGGGCTT GACGTTCATCGGCGTCGCCATCTTCGCGAGCCCCGCGGTGCTGATCGACGGCGGGAGCCGCGGCCGCAGACCGTGGCTCG TCCCGGTCACCGCGCTCATGCTGCTCCTCGCCATGAGCATCTACGGTTCAGTCAGGCTATCGCGGCATCCGACGGAATTC GCGGACAACGTGAAACTACGTATCATGCAGCCCAATCTGGCGCAGGACGCGCGGTTCAACTATTCCGCCAAGGCGGCGGT GATGCAGAAGTACCTGGCGCTGTCGGACCGGGCCACCGGACCGCACTCAACGGGCGTCAGCGGCGCGACCATCCTGATCT GGCCCGAATCGGCTTTCCCGTTTTTTCTGACCCGCGAAGCCGACGCGATGGCGGAAATCGCCGATCTCCTGCCGAAAGGC ACGATCCTCATGACCGGCTCGGTGCGCGCTCCCGACCCGTCGCCGAACGGCAGGATCACCAGAGCTTTCAACTCGATCTA TGTCATCGGCGATGACGGCGGCATCCTGTCGATCTACGACAAGCTCCATTTGGTGCCGTTTGGCGAATTCCTGCCGTTTC AGGGACTGATGGAAAAGCTCGGCTTCGTTCAACTCACCAAGGTCCAGGGCGGTTTCATTCCCGGAAAGAGCCGGCGGACC ATCGAGCTTCCGAACGCCCCGAGCGTTCTCCCGCTGATCTGCTACGAGGCGATCTTTCCGGACGGGATGCAGACCAGGGG CGGTCGGCCGGGCTGGATCGTCAACCTCACCAATGACGGCTGGTTCGGCATCAGCACGGGGCCTCATCAGCATCTTCAGC AGGCGCGGCTGCGCGCCATCGAGCAGGGACTGCCCCTCGTGCGAGCGGCGAACACCGGTATTTCCGTAGTTACGGATCCC GTAGGGCGTATTGTCGCACGGCTCGATCTCGGCGTGGAAAGCGTTCTGGACTCTCGCTTGCCCGTCAACATGACGCCAAC GCCCTACGCCCGCGCAGGTGATATTCCCGCCGCAATCATGGTGACCATGGCGCTCGTCCTGGTGATTCGCCGGCGTCGCG GGCACTAG
Upstream 100 bases:
>100_bases CGCGCGACGGCCGACGCCGGGAGAACGCGCCGGATGCAACCTCGCAATCGCAGGGCGATCCGGCCTCTCCTTCATCGCCG GGCGACGGAGGCGACCCCCA
Downstream 100 bases:
>100_bases CCGCGACGCGCACGTCATCTTGATCACCGGGTATCTTGATCACCGGGTACGATGTTCACGGCAGCGCTTCGTTCACACGA TCGATATAATTCGTGTAACA
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MSLSIAGSARTAGVAVTLSWGWKRAFVALASGAASSLAMEPFNAWPLLFVTFPVATWLIDGSAGRLRGVPAAALAGWLFG FGYFVPGLYWIGNAFLVDAQTFAWLIPFAVLGLPAYLALFTALGFALARFIWTTDASRILALAAALTISEWLRGHVLTGF PWNAFGYALTEPLALAQTASLIGLWGLTFIGVAIFASPAVLIDGGSRGRRPWLVPVTALMLLLAMSIYGSVRLSRHPTEF ADNVKLRIMQPNLAQDARFNYSAKAAVMQKYLALSDRATGPHSTGVSGATILIWPESAFPFFLTREADAMAEIADLLPKG TILMTGSVRAPDPSPNGRITRAFNSIYVIGDDGGILSIYDKLHLVPFGEFLPFQGLMEKLGFVQLTKVQGGFIPGKSRRT IELPNAPSVLPLICYEAIFPDGMQTRGGRPGWIVNLTNDGWFGISTGPHQHLQQARLRAIEQGLPLVRAANTGISVVTDP VGRIVARLDLGVESVLDSRLPVNMTPTPYARAGDIPAAIMVTMALVLVIRRRRGH
Sequences:
>Translated_535_residues MSLSIAGSARTAGVAVTLSWGWKRAFVALASGAASSLAMEPFNAWPLLFVTFPVATWLIDGSAGRLRGVPAAALAGWLFG FGYFVPGLYWIGNAFLVDAQTFAWLIPFAVLGLPAYLALFTALGFALARFIWTTDASRILALAAALTISEWLRGHVLTGF PWNAFGYALTEPLALAQTASLIGLWGLTFIGVAIFASPAVLIDGGSRGRRPWLVPVTALMLLLAMSIYGSVRLSRHPTEF ADNVKLRIMQPNLAQDARFNYSAKAAVMQKYLALSDRATGPHSTGVSGATILIWPESAFPFFLTREADAMAEIADLLPKG TILMTGSVRAPDPSPNGRITRAFNSIYVIGDDGGILSIYDKLHLVPFGEFLPFQGLMEKLGFVQLTKVQGGFIPGKSRRT IELPNAPSVLPLICYEAIFPDGMQTRGGRPGWIVNLTNDGWFGISTGPHQHLQQARLRAIEQGLPLVRAANTGISVVTDP VGRIVARLDLGVESVLDSRLPVNMTPTPYARAGDIPAAIMVTMALVLVIRRRRGH >Mature_534_residues SLSIAGSARTAGVAVTLSWGWKRAFVALASGAASSLAMEPFNAWPLLFVTFPVATWLIDGSAGRLRGVPAAALAGWLFGF GYFVPGLYWIGNAFLVDAQTFAWLIPFAVLGLPAYLALFTALGFALARFIWTTDASRILALAAALTISEWLRGHVLTGFP WNAFGYALTEPLALAQTASLIGLWGLTFIGVAIFASPAVLIDGGSRGRRPWLVPVTALMLLLAMSIYGSVRLSRHPTEFA DNVKLRIMQPNLAQDARFNYSAKAAVMQKYLALSDRATGPHSTGVSGATILIWPESAFPFFLTREADAMAEIADLLPKGT ILMTGSVRAPDPSPNGRITRAFNSIYVIGDDGGILSIYDKLHLVPFGEFLPFQGLMEKLGFVQLTKVQGGFIPGKSRRTI ELPNAPSVLPLICYEAIFPDGMQTRGGRPGWIVNLTNDGWFGISTGPHQHLQQARLRAIEQGLPLVRAANTGISVVTDPV GRIVARLDLGVESVLDSRLPVNMTPTPYARAGDIPAAIMVTMALVLVIRRRRGH
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=535, Percent_Identity=30.4672897196262, Blast_Score=167, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 57569; Mature: 57438
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSIAGSARTAGVAVTLSWGWKRAFVALASGAASSLAMEPFNAWPLLFVTFPVATWLID CCEEECCCCCCCCEEEEEECCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHEEEE GSAGRLRGVPAAALAGWLFGFGYFVPGLYWIGNAFLVDAQTFAWLIPFAVLGLPAYLALF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH TALGFALARFIWTTDASRILALAAALTISEWLRGHVLTGFPWNAFGYALTEPLALAQTAS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCHHHHHHHHH LIGLWGLTFIGVAIFASPAVLIDGGSRGRRPWLVPVTALMLLLAMSIYGSVRLSRHPTEF HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCEEECCCCHHH ADNVKLRIMQPNLAQDARFNYSAKAAVMQKYLALSDRATGPHSTGVSGATILIWPESAFP CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC FFLTREADAMAEIADLLPKGTILMTGSVRAPDPSPNGRITRAFNSIYVIGDDGGILSIYD EEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECEEEEEECCCCEEEEEC KLHLVPFGEFLPFQGLMEKLGFVQLTKVQGGFIPGKSRRTIELPNAPSVLPLICYEAIFP CEEEEECHHCCCHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHCC DGMQTRGGRPGWIVNLTNDGWFGISTGPHQHLQQARLRAIEQGLPLVRAANTGISVVTDP CCCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECH VGRIVARLDLGVESVLDSRLPVNMTPTPYARAGDIPAAIMVTMALVLVIRRRRGH HHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLSIAGSARTAGVAVTLSWGWKRAFVALASGAASSLAMEPFNAWPLLFVTFPVATWLID CEEECCCCCCCCEEEEEECCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHEEEE GSAGRLRGVPAAALAGWLFGFGYFVPGLYWIGNAFLVDAQTFAWLIPFAVLGLPAYLALF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH TALGFALARFIWTTDASRILALAAALTISEWLRGHVLTGFPWNAFGYALTEPLALAQTAS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCHHHHHHHHH LIGLWGLTFIGVAIFASPAVLIDGGSRGRRPWLVPVTALMLLLAMSIYGSVRLSRHPTEF HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCEEECCCCHHH ADNVKLRIMQPNLAQDARFNYSAKAAVMQKYLALSDRATGPHSTGVSGATILIWPESAFP CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC FFLTREADAMAEIADLLPKGTILMTGSVRAPDPSPNGRITRAFNSIYVIGDDGGILSIYD EEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECEEEEEECCCCEEEEEC KLHLVPFGEFLPFQGLMEKLGFVQLTKVQGGFIPGKSRRTIELPNAPSVLPLICYEAIFP CEEEEECHHCCCHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHCC DGMQTRGGRPGWIVNLTNDGWFGISTGPHQHLQQARLRAIEQGLPLVRAANTGISVVTDP CCCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECH VGRIVARLDLGVESVLDSRLPVNMTPTPYARAGDIPAAIMVTMALVLVIRRRRGH HHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA