| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is fur [H]
Identifier: 75674212
GI number: 75674212
Start: 13439
End: 13909
Strand: Direct
Name: fur [H]
Synonym: Nwi_0013
Alternate gene names: 75674212
Gene position: 13439-13909 (Clockwise)
Preceding gene: 75674211
Following gene: 75674213
Centisome position: 0.4
GC content: 61.57
Gene sequence:
>471_bases ATGCGCCATCGGAACCGGACACTAGAGATGATGGCCCTAAAATCGACGCCTGTGCAGAAGCCCACCACGATCGAGGCGCG TTGCGCGGCCGCCGGAATGCGCATGACCGAACAGCGCCGGGTTATCGCGCGCGTGCTCGCGGAGGCGTCCGATCATCCCG ACGTCGAGGAGCTTTACCGGCGCTGCGCCGGGGTGGATGACAAGATCTCGATCTCGACGGTCTATCGCACGGTGAAGCTG TTCGAGGATGCCGGCATCATCGAGCGGCACGATTTCCGCGAAGGCCGCGCGCGCTATGAGACGATGCGCGACAGCCACCA CGATCATCTGATCAACCTGCGCGACGGCCAGGTTATCGAATTCACTTCGGATGAGATCGAGAAACTGCAAGCCGAGGTCG CGCGCAAGCTCGGCTACCGGCTGGTCGATCATCGGCTCGAACTCTATTGCGTGCCGATGGATGACGAATAA
Upstream 100 bases:
>100_bases GAGCCAGGGAGAACCACCGGCAACGGTGCATCGGTTTTTTCGTCCGGTCGCACTCCTTATATCGTTCGCGCGCATTATCT TACGCACATATGAGCGGATC
Downstream 100 bases:
>100_bases GTCGCGGGTGCCTGTCGAAATGCCGGAAAGCCGCATGCCGCCGCGCAAGCTGCACATCAAATCCTACGGTTGCCAGATGA ACGTCTACGACGCCCAGCGC
Product: ferric-uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRHRNRTLEMMALKSTPVQKPTTIEARCAAAGMRMTEQRRVIARVLAEASDHPDVEELYRRCAGVDDKISISTVYRTVKL FEDAGIIERHDFREGRARYETMRDSHHDHLINLRDGQVIEFTSDEIEKLQAEVARKLGYRLVDHRLELYCVPMDDE
Sequences:
>Translated_156_residues MRHRNRTLEMMALKSTPVQKPTTIEARCAAAGMRMTEQRRVIARVLAEASDHPDVEELYRRCAGVDDKISISTVYRTVKL FEDAGIIERHDFREGRARYETMRDSHHDHLINLRDGQVIEFTSDEIEKLQAEVARKLGYRLVDHRLELYCVPMDDE >Mature_156_residues MRHRNRTLEMMALKSTPVQKPTTIEARCAAAGMRMTEQRRVIARVLAEASDHPDVEELYRRCAGVDDKISISTVYRTVKL FEDAGIIERHDFREGRARYETMRDSHHDHLINLRDGQVIEFTSDEIEKLQAEVARKLGYRLVDHRLELYCVPMDDE
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=120, Percent_Identity=45, Blast_Score=104, Evalue=3e-24,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18213; Mature: 18213
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRNRTLEMMALKSTPVQKPTTIEARCAAAGMRMTEQRRVIARVLAEASDHPDVEELYR CCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHH RCAGVDDKISISTVYRTVKLFEDAGIIERHDFREGRARYETMRDSHHDHLINLRDGQVIE HHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEE FTSDEIEKLQAEVARKLGYRLVDHRLELYCVPMDDE ECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC >Mature Secondary Structure MRHRNRTLEMMALKSTPVQKPTTIEARCAAAGMRMTEQRRVIARVLAEASDHPDVEELYR CCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHH RCAGVDDKISISTVYRTVKLFEDAGIIERHDFREGRARYETMRDSHHDHLINLRDGQVIE HHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEE FTSDEIEKLQAEVARKLGYRLVDHRLELYCVPMDDE ECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9835040 [H]