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The map label for this gene is yhcS [C]

Identifier: 73539528

GI number: 73539528

Start: 2533992

End: 2534888

Strand: Direct

Name: yhcS [C]

Synonym: Reut_B5706

Alternate gene names: 73539528

Gene position: 2533992-2534888 (Clockwise)

Preceding gene: 73539525

Following gene: 73539529

Centisome position: 92.95

GC content: 51.39

Gene sequence:

>897_bases
ATGATCAGAATGACCGACGTCGATCTACGGTTGTTGCGCATATTCAAAACGGTTGCTGACTTGAAAGGTCTTTCAGCAGC
GGAATCTGCGCTCAATATGAATCTGTCCACCATAAGCTCCCACATGACGGATCTCGAAAAGCGACTGGGCCTAAGGCTAT
GCGAGCGCGGTCGGCGGGGCTTCCATCTGACCGAAGAGGGCTATTCTGTTTATCAGGCGGCCGAGAGCTTGCTGAACTCA
GTGGAAGAATTCCGGGCGGACATCGGGGCCATACGTCATGAGATTAGCGGCGAGTTGGCAATTGGCGTTGTAGATAACAC
CATCACCGACGTGCAGGCCAAAATTACGGATGCGATCCGCGCCGTCAAGAAAAAAGGGGGTGATCTCTTTTTGAAAATGG
AAATCAAATCCCCAGACGAGATCGAGGCTGCGGTGCTTGAGCGGAGAATACATGTTGGCATTGGACCCTTCCGAATTATG
CATCCAGGTTTGAAGTACCTGCCACTTTATACAGAGAATCTACGTCTTTACTGCAGCCACCTCCACCCTCTTTTCAATTC
GGCTCCGAATGACATCAACACAGAGGATTTGCAGAAGCTGGATTACGTTGCGCGGGGTTATATGCGCGAATCCAGGGAGC
TGAGCGACGCTAGCAACTTTAAAGTAGCGGCCACCGTCCATCACATGGAAGCGGTCGCGACCCTCGTTTTGTCAGGCAAC
TTTATCGGGTTCCTTCCGGAGCATTATGCCTTGCAGTGGGTCAAGCAAGACCTGATGCGAGCGATACATCCCGCGTTTCT
AAGCCATAGCGCCGAATTCTCGCTGGCGTTGCTAAAAGGTCGTGAACAGACGATAGCTGTGCGAGTATTTGTAGAGGCGT
TGCAATCTTCTTTATAG

Upstream 100 bases:

>100_bases
CAAGGTCGGCGGCCGTGCTAGGCTGTCCATGGGGCGATGCGACGTAAGCTGTAGGAGCCACTAGTGCAAGCCCACGGACA
GCGGATGGAGGAGTATCAGT

Downstream 100 bases:

>100_bases
CTCAATCTACGTATGTCAACGTAGCTCCCGCATTTTTCACCTCGAGTTCGACGGTCATGGCGACGTTTTGGGAGGGAAGA
GCATTGGAGACTCGCTCGAG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; Transcriptional Regulator LysR Family Protein; Transcriptional Regulator LysR; LysR Family Regulatory Protein; Transcriptional Regulator Of LysR Family Protein; Transcriptional Regulator Lysr Family; LysR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcriptional Regulator Transcription Regulator Protein

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MIRMTDVDLRLLRIFKTVADLKGLSAAESALNMNLSTISSHMTDLEKRLGLRLCERGRRGFHLTEEGYSVYQAAESLLNS
VEEFRADIGAIRHEISGELAIGVVDNTITDVQAKITDAIRAVKKKGGDLFLKMEIKSPDEIEAAVLERRIHVGIGPFRIM
HPGLKYLPLYTENLRLYCSHLHPLFNSAPNDINTEDLQKLDYVARGYMRESRELSDASNFKVAATVHHMEAVATLVLSGN
FIGFLPEHYALQWVKQDLMRAIHPAFLSHSAEFSLALLKGREQTIAVRVFVEALQSSL

Sequences:

>Translated_298_residues
MIRMTDVDLRLLRIFKTVADLKGLSAAESALNMNLSTISSHMTDLEKRLGLRLCERGRRGFHLTEEGYSVYQAAESLLNS
VEEFRADIGAIRHEISGELAIGVVDNTITDVQAKITDAIRAVKKKGGDLFLKMEIKSPDEIEAAVLERRIHVGIGPFRIM
HPGLKYLPLYTENLRLYCSHLHPLFNSAPNDINTEDLQKLDYVARGYMRESRELSDASNFKVAATVHHMEAVATLVLSGN
FIGFLPEHYALQWVKQDLMRAIHPAFLSHSAEFSLALLKGREQTIAVRVFVEALQSSL
>Mature_298_residues
MIRMTDVDLRLLRIFKTVADLKGLSAAESALNMNLSTISSHMTDLEKRLGLRLCERGRRGFHLTEEGYSVYQAAESLLNS
VEEFRADIGAIRHEISGELAIGVVDNTITDVQAKITDAIRAVKKKGGDLFLKMEIKSPDEIEAAVLERRIHVGIGPFRIM
HPGLKYLPLYTENLRLYCSHLHPLFNSAPNDINTEDLQKLDYVARGYMRESRELSDASNFKVAATVHHMEAVATLVLSGN
FIGFLPEHYALQWVKQDLMRAIHPAFLSHSAEFSLALLKGREQTIAVRVFVEALQSSL

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33444; Mature: 33444

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRMTDVDLRLLRIFKTVADLKGLSAAESALNMNLSTISSHMTDLEKRLGLRLCERGRRG
CCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
FHLTEEGYSVYQAAESLLNSVEEFRADIGAIRHEISGELAIGVVDNTITDVQAKITDAIR
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
AVKKKGGDLFLKMEIKSPDEIEAAVLERRIHVGIGPFRIMHPGLKYLPLYTENLRLYCSH
HHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEHHHHHHHHHH
LHPLFNSAPNDINTEDLQKLDYVARGYMRESRELSDASNFKVAATVHHMEAVATLVLSGN
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCC
FIGFLPEHYALQWVKQDLMRAIHPAFLSHSAEFSLALLKGREQTIAVRVFVEALQSSL
CCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRMTDVDLRLLRIFKTVADLKGLSAAESALNMNLSTISSHMTDLEKRLGLRLCERGRRG
CCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
FHLTEEGYSVYQAAESLLNSVEEFRADIGAIRHEISGELAIGVVDNTITDVQAKITDAIR
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
AVKKKGGDLFLKMEIKSPDEIEAAVLERRIHVGIGPFRIMHPGLKYLPLYTENLRLYCSH
HHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEHHHHHHHHHH
LHPLFNSAPNDINTEDLQKLDYVARGYMRESRELSDASNFKVAATVHHMEAVATLVLSGN
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCC
FIGFLPEHYALQWVKQDLMRAIHPAFLSHSAEFSLALLKGREQTIAVRVFVEALQSSL
CCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA