| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is xylI [H]
Identifier: 73539514
GI number: 73539514
Start: 2522586
End: 2523377
Strand: Direct
Name: xylI [H]
Synonym: Reut_B5692
Alternate gene names: 73539514
Gene position: 2522586-2523377 (Clockwise)
Preceding gene: 73539513
Following gene: 73539515
Centisome position: 92.53
GC content: 65.15
Gene sequence:
>792_bases ATGACATTGAACCGGGAAACCATTGAAGCGCTCGCCGCGCATGTCGAGAGCGCACAACTTGCCGTGCGCGACATCACGAA GATCACCGACGAATACCCTGATCTCGACTGGGCCGACGCCTATGACATCCAGGACGAGATTCGCCGGCGCAAGGAGTCGC GCGGCCTCAGGACGGTGGGGCTGAAGGCCGGGCTCACGTCGTTCGCCAAGATGAAGCAGATGGGGGTGGAGACGCCGGTC TTTGGCTTCGTCAGTGAAGACATGGCGCGGCCGGACGGCGGCGAGATTCGCATGTCGGAGTTGATCCACCCCAAGGTAGA GGCGGAGATCTGCATCGTCACCAAGGCGCCGCTGCGAGGCCCGGGCTGCCACGTGGGCAGCGTGCTGGCGGCAATCGACT TTGTCGTGCCGGCGGTGGAAATCATCGACAGCCGCTACCGCGACTTCAAGTTCGACCTGAAGAGCGTCATTGCCGACAAC ACCTCGGCGGCGCGCTTTGTGGTGGGTGGACGCGCGCGCGCCCCGGAGGACCTCGACCTGCGCACGCTCGGCGTGGTGCT GGAGAAGAATGGCCGTGCCGTCGCCATGGCGGCTGGGGCGGCGGTGCTGGGTCATCCGGCGGCAGCAGTGGCGATGATGG CAAACCACCTCGGCGCGCGCGGCCAGGAAATCCCGGCCGGCACGTTCATCATGACCGGCGGCGTGACAGAGGCCATTGCC GTCGCGGCGGGCGACAGCGTGTGCGTACGCTTCCAGAAGCTGGGTAGCGTATCAATGCGATTCGTGAAATGA
Upstream 100 bases:
>100_bases GTGCCCGTCAAGCCGGGCGACAGCCTGTATTGCAGCGTGGGCGGGCTGGGCGGGACCTCGGTGCGCTTCATCTGACTCAT ACCCATCGGGAAACCAGACC
Downstream 100 bases:
>100_bases GTGTCCGTTGCCGCTAGATCGAAGCGAGCCACGATGTCGGCCTGACTATTGCCTGTCATCGGCATGGCGCCGGCGAGAAG TGTCGCGTGCTCGAGTGATC
Product: 4-oxalocrotonate decarboxylase
Products: NA
Alternate protein names: 4-OD [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTLNRETIEALAAHVESAQLAVRDITKITDEYPDLDWADAYDIQDEIRRRKESRGLRTVGLKAGLTSFAKMKQMGVETPV FGFVSEDMARPDGGEIRMSELIHPKVEAEICIVTKAPLRGPGCHVGSVLAAIDFVVPAVEIIDSRYRDFKFDLKSVIADN TSAARFVVGGRARAPEDLDLRTLGVVLEKNGRAVAMAAGAAVLGHPAAAVAMMANHLGARGQEIPAGTFIMTGGVTEAIA VAAGDSVCVRFQKLGSVSMRFVK
Sequences:
>Translated_263_residues MTLNRETIEALAAHVESAQLAVRDITKITDEYPDLDWADAYDIQDEIRRRKESRGLRTVGLKAGLTSFAKMKQMGVETPV FGFVSEDMARPDGGEIRMSELIHPKVEAEICIVTKAPLRGPGCHVGSVLAAIDFVVPAVEIIDSRYRDFKFDLKSVIADN TSAARFVVGGRARAPEDLDLRTLGVVLEKNGRAVAMAAGAAVLGHPAAAVAMMANHLGARGQEIPAGTFIMTGGVTEAIA VAAGDSVCVRFQKLGSVSMRFVK >Mature_262_residues TLNRETIEALAAHVESAQLAVRDITKITDEYPDLDWADAYDIQDEIRRRKESRGLRTVGLKAGLTSFAKMKQMGVETPVF GFVSEDMARPDGGEIRMSELIHPKVEAEICIVTKAPLRGPGCHVGSVLAAIDFVVPAVEIIDSRYRDFKFDLKSVIADNT SAARFVVGGRARAPEDLDLRTLGVVLEKNGRAVAMAAGAAVLGHPAAAVAMMANHLGARGQEIPAGTFIMTGGVTEAIAV AAGDSVCVRFQKLGSVSMRFVK
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=259, Percent_Identity=32.046332046332, Blast_Score=138, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017630 - InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.1.1.77 [H]
Molecular weight: Translated: 28180; Mature: 28049
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNRETIEALAAHVESAQLAVRDITKITDEYPDLDWADAYDIQDEIRRRKESRGLRTVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE LKAGLTSFAKMKQMGVETPVFGFVSEDMARPDGGEIRMSELIHPKVEAEICIVTKAPLRG HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEHHHHCCCCCCCEEEEEEECCCCC PGCHVGSVLAAIDFVVPAVEIIDSRYRDFKFDLKSVIADNTSAARFVVGGRARAPEDLDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCH RTLGVVLEKNGRAVAMAAGAAVLGHPAAAVAMMANHLGARGQEIPAGTFIMTGGVTEAIA HEEEEEEECCCCEEEEECCCHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHH VAAGDSVCVRFQKLGSVSMRFVK HHCCCHHHHHHHHHCCCCEEECC >Mature Secondary Structure TLNRETIEALAAHVESAQLAVRDITKITDEYPDLDWADAYDIQDEIRRRKESRGLRTVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE LKAGLTSFAKMKQMGVETPVFGFVSEDMARPDGGEIRMSELIHPKVEAEICIVTKAPLRG HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEHHHHCCCCCCCEEEEEEECCCCC PGCHVGSVLAAIDFVVPAVEIIDSRYRDFKFDLKSVIADNTSAARFVVGGRARAPEDLDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCH RTLGVVLEKNGRAVAMAAGAAVLGHPAAAVAMMANHLGARGQEIPAGTFIMTGGVTEAIA HEEEEEEECCCCEEEEECCCHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHH VAAGDSVCVRFQKLGSVSMRFVK HHCCCHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8510667 [H]