| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is flhF [H]
Identifier: 73539439
GI number: 73539439
Start: 2437099
End: 2439513
Strand: Direct
Name: flhF [H]
Synonym: Reut_B5617
Alternate gene names: 73539439
Gene position: 2437099-2439513 (Clockwise)
Preceding gene: 73539438
Following gene: 73539440
Centisome position: 89.4
GC content: 69.03
Gene sequence:
>2415_bases ATGAGCGTAGCGAAATTCGTGGCGGCCAACGGCCGTGAAGCCATGCGCAAGGTGCGCGAAGCCATGGGACCCGATGCCGT GGTGCTGTCCAACCGCACCATCGATGGCGGCGTGGAAATCGTAGCCATGCGCGACACCGACCTGAGCGCCGCATCGGCCG GCGCGCAGGTCTACGTGGCGCCCGCGCCGGTCGTGGCAGCGCCCGAGCCGGTCGTGGCAGCGCCCGAGCCGGCTGCCATC GACGATCTGCGCGGCGAACTGCAGTCCATGCGTGCCATGTTCGAACGGCAATTGGCCGGGCTGGCCCCCGCCGCTGCCGC TGGCGCGGTTTCCAATGGCGATCCGCTGCGCGAATCGCTGTTCGCCTGGATGGTCGGGGCCGGCTTCTCGGCACAGCTTT CGCGTACGCTGCTGGCGCGGCTGCCGGTTGGCTACGACCGTCCCGCTGCCATGACATGGATTCGCGGCGAGCTGGCCAGC AAGGTGCCCGTACTCGACAACGAAGACACACTGTTCGACCAGGGCGGCGTGCTTGCGCTGATCGGTCCGACCGGCGTGGG CAAGACCACCACGACGGCCAAGCTGGCCGCGCGCTACGTGCTGCGCCACGGTCCCGAGCGCCTGGCGCTGCTGACCACCG ACAGCTTCCGTATCGGCGCGCATGAACAGCTGCGCATCTATGGCGATATCCTCGGCGTGCCCGTGCATGCGGTGAAAGAT GCTGCCGATCTGCGCTTCGCGCTCGCGGCGATGAAGGACAAGCATCTGGTGATCATCGACACCGTCGGCATGAGCCAGCG GGACCGCAACCTGTCGGAGCAGATCGCCATGCTTGCCGGCGTGCAGGCGCCGGTGCAGCGTGTGCTGCTGCTCAATGGCG CCAGCCATGGCGACACACTCAACGAGGTGGTGCATGCCTACCGCCATGACGCCGTGCCGGAAGGCGGTGGCGTCGACGGC TGCATCATCAGCAAGCTCGACGAAGCCACGCATCTGGGCTCCGTGCTCGATGTCGTGATTCGCCATCGCTTGCCGGTGTT CTACGTGTCCACCGGACAGCGTGTGCCGGAACACCTCGAGCTTGCGCAAGGCGCCTCGCTGGTCGAGCGTGCGTTCCTGA CGCCGCGCCGTGGTTCGGTGTTTGCCGATGCAGATGCTGCACGGCGCCAGGCCGGCACCCTCGACGAAGCGCCGGGCCGC CAGGGCGGCGCCGACGATGTGCTGCGGTCGCTGACCGACAGCGCGGACGCGCTGGGCCAGTGCGTGAATGAACTCAATGC CGCGCAGCATGGCTTCGACCTGGCGCGCCAGCTCTGGCAGCAGCGCACGGCTGATACGCCCGCACTGCGGCCGATGGCGC AGCAGGTGCGCGAAGCGGTTTGCCGCGACGTGAACCGCGAATGCGACCACTTCGTGCTGTCGCTGACGGCCACGCTGCAG GTGCCAGTACCGGGACGCCGTGCGCCGCAGTCGATGCTGCATACGCTGTGGCTGGGCGACCGCACCGGCATGCCGCTGGC GGCCACGGTTACGCCTGCCGGACGTGCTGGCCAGGCCATGGGCGAAGCCGACGCCGAGGTCGCCACGCTGCGCGCCACCC TTGGCGCGGCGCGGCCCGTCGTGCATATGCTGGATGCGCTACCGGCCGGGGCCACGCTGGCGCGCTGGCAGCAATCCGGC GAGCGCTGGGTCGCTGCCACACGCAAGACGGCGCGCGTGATCACCGGCGGCGCGGCGTGGAAGCTTGATGCACTGGCCGA AACGCTGACGTTCCACGCCATGGGCGAGTTCACCGTGCGTGGCCGCGAGGCCGCGCAGTGGCTCGCCACGGCGGATGTCC GTGTGCCGGAAGGCCCCGTGCGTGGCCGCGGTGCACCGGAAGGCGGCATCGACGCGAAACTCGTGATTGCAAGAATGGTC GACCACGCTTCGGGCGAACTGTTCGATACGCGCTACCTGCTGTGCGACCCGCAGCTGTCAGGCCGGGCCGCGCACACGGC ACGCTGGGCGCTGTGGGCCGACAACGCGGATGCGCAGTTCCGCACGCTGCGCCATGCGCTCGATCATTTCGCTCAGGATG GCGAAAGCGCCGCTGGCGGCAGCGTGGCCGCGCTTCAGCTCGGTCTGACGGTGCTGCGCCTCGAACACGCGCCCACGGCT ACTGCCCCGGCCTTCCTGGCCCGCCTTGCCGGCCGCACGGCTGCGAGACAGCCCGGCGGCGCATCGGTGCCGGGATCAGT GCTGAATGAAGGCATGGGGCGCCTGCTGGCTTTGCTCGATGTACTCGAAAACTATCCGGGCCGCCCGGTCGTTGACGCCG TCGAGGCCGACGCGTCTGCGGAGCCGGACGTGCAAGCGCAATCGAATGTGGTGGTGGGACTTCCCCAACTCATGGCGCCG GGAGTCGTGTCGTGA
Upstream 100 bases:
>100_bases CGTCGCACCATGCCGCAGCTGAGGGTGTTGTCCCATGCCGAAGTGCCGGACAACCGCAATATCCGCATTACCGCAATGAT CGGTGCGTGAGGAACGCAAG
Downstream 100 bases:
>100_bases GCGCGCTCGCAATGGACCAGGCCGAAAGCCTGCGACGCATGCTGGCGCCGCGTGTCACGCGCCGCATTGCGGTGGTGGCC AGCGAACGCGGTGCCGGTGC
Product: flagellar biosynthesis regulator FlhF
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 804; Mature: 803
Protein sequence:
>804_residues MSVAKFVAANGREAMRKVREAMGPDAVVLSNRTIDGGVEIVAMRDTDLSAASAGAQVYVAPAPVVAAPEPVVAAPEPAAI DDLRGELQSMRAMFERQLAGLAPAAAAGAVSNGDPLRESLFAWMVGAGFSAQLSRTLLARLPVGYDRPAAMTWIRGELAS KVPVLDNEDTLFDQGGVLALIGPTGVGKTTTTAKLAARYVLRHGPERLALLTTDSFRIGAHEQLRIYGDILGVPVHAVKD AADLRFALAAMKDKHLVIIDTVGMSQRDRNLSEQIAMLAGVQAPVQRVLLLNGASHGDTLNEVVHAYRHDAVPEGGGVDG CIISKLDEATHLGSVLDVVIRHRLPVFYVSTGQRVPEHLELAQGASLVERAFLTPRRGSVFADADAARRQAGTLDEAPGR QGGADDVLRSLTDSADALGQCVNELNAAQHGFDLARQLWQQRTADTPALRPMAQQVREAVCRDVNRECDHFVLSLTATLQ VPVPGRRAPQSMLHTLWLGDRTGMPLAATVTPAGRAGQAMGEADAEVATLRATLGAARPVVHMLDALPAGATLARWQQSG ERWVAATRKTARVITGGAAWKLDALAETLTFHAMGEFTVRGREAAQWLATADVRVPEGPVRGRGAPEGGIDAKLVIARMV DHASGELFDTRYLLCDPQLSGRAAHTARWALWADNADAQFRTLRHALDHFAQDGESAAGGSVAALQLGLTVLRLEHAPTA TAPAFLARLAGRTAARQPGGASVPGSVLNEGMGRLLALLDVLENYPGRPVVDAVEADASAEPDVQAQSNVVVGLPQLMAP GVVS
Sequences:
>Translated_804_residues MSVAKFVAANGREAMRKVREAMGPDAVVLSNRTIDGGVEIVAMRDTDLSAASAGAQVYVAPAPVVAAPEPVVAAPEPAAI DDLRGELQSMRAMFERQLAGLAPAAAAGAVSNGDPLRESLFAWMVGAGFSAQLSRTLLARLPVGYDRPAAMTWIRGELAS KVPVLDNEDTLFDQGGVLALIGPTGVGKTTTTAKLAARYVLRHGPERLALLTTDSFRIGAHEQLRIYGDILGVPVHAVKD AADLRFALAAMKDKHLVIIDTVGMSQRDRNLSEQIAMLAGVQAPVQRVLLLNGASHGDTLNEVVHAYRHDAVPEGGGVDG CIISKLDEATHLGSVLDVVIRHRLPVFYVSTGQRVPEHLELAQGASLVERAFLTPRRGSVFADADAARRQAGTLDEAPGR QGGADDVLRSLTDSADALGQCVNELNAAQHGFDLARQLWQQRTADTPALRPMAQQVREAVCRDVNRECDHFVLSLTATLQ VPVPGRRAPQSMLHTLWLGDRTGMPLAATVTPAGRAGQAMGEADAEVATLRATLGAARPVVHMLDALPAGATLARWQQSG ERWVAATRKTARVITGGAAWKLDALAETLTFHAMGEFTVRGREAAQWLATADVRVPEGPVRGRGAPEGGIDAKLVIARMV DHASGELFDTRYLLCDPQLSGRAAHTARWALWADNADAQFRTLRHALDHFAQDGESAAGGSVAALQLGLTVLRLEHAPTA TAPAFLARLAGRTAARQPGGASVPGSVLNEGMGRLLALLDVLENYPGRPVVDAVEADASAEPDVQAQSNVVVGLPQLMAP GVVS >Mature_803_residues SVAKFVAANGREAMRKVREAMGPDAVVLSNRTIDGGVEIVAMRDTDLSAASAGAQVYVAPAPVVAAPEPVVAAPEPAAID DLRGELQSMRAMFERQLAGLAPAAAAGAVSNGDPLRESLFAWMVGAGFSAQLSRTLLARLPVGYDRPAAMTWIRGELASK VPVLDNEDTLFDQGGVLALIGPTGVGKTTTTAKLAARYVLRHGPERLALLTTDSFRIGAHEQLRIYGDILGVPVHAVKDA ADLRFALAAMKDKHLVIIDTVGMSQRDRNLSEQIAMLAGVQAPVQRVLLLNGASHGDTLNEVVHAYRHDAVPEGGGVDGC IISKLDEATHLGSVLDVVIRHRLPVFYVSTGQRVPEHLELAQGASLVERAFLTPRRGSVFADADAARRQAGTLDEAPGRQ GGADDVLRSLTDSADALGQCVNELNAAQHGFDLARQLWQQRTADTPALRPMAQQVREAVCRDVNRECDHFVLSLTATLQV PVPGRRAPQSMLHTLWLGDRTGMPLAATVTPAGRAGQAMGEADAEVATLRATLGAARPVVHMLDALPAGATLARWQQSGE RWVAATRKTARVITGGAAWKLDALAETLTFHAMGEFTVRGREAAQWLATADVRVPEGPVRGRGAPEGGIDAKLVIARMVD HASGELFDTRYLLCDPQLSGRAAHTARWALWADNADAQFRTLRHALDHFAQDGESAAGGSVAALQLGLTVLRLEHAPTAT APAFLARLAGRTAARQPGGASVPGSVLNEGMGRLLALLDVLENYPGRPVVDAVEADASAEPDVQAQSNVVVGLPQLMAPG VVS
Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]
COG id: COG1419
COG function: function code N; Flagellar GTP-binding protein
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding SRP family [H]
Homologues:
Organism=Escherichia coli, GI1789874, Length=209, Percent_Identity=31.5789473684211, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR000897 - InterPro: IPR020006 [H]
Pfam domain/function: PF00448 SRP54 [H]
EC number: NA
Molecular weight: Translated: 84927; Mature: 84796
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAKFVAANGREAMRKVREAMGPDAVVLSNRTIDGGVEIVAMRDTDLSAASAGAQVYVA CCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCEECCCEEEEEEECCCCCHHCCCCEEEEE PAPVVAAPEPVVAAPEPAAIDDLRGELQSMRAMFERQLAGLAPAAAAGAVSNGDPLRESL CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHH FAWMVGAGFSAQLSRTLLARLPVGYDRPAAMTWIRGELASKVPVLDNEDTLFDQGGVLAL HHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEE IGPTGVGKTTTTAKLAARYVLRHGPERLALLTTDSFRIGAHEQLRIYGDILGVPVHAVKD ECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCHHHEEEHHHHCCCHHHHHH AADLRFALAAMKDKHLVIIDTVGMSQRDRNLSEQIAMLAGVQAPVQRVLLLNGASHGDTL HHHHHHHHHHHCCCCEEEEEECCCCCHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH NEVVHAYRHDAVPEGGGVDGCIISKLDEATHLGSVLDVVIRHRLPVFYVSTGQRVPEHLE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH LAQGASLVERAFLTPRRGSVFADADAARRQAGTLDEAPGRQGGADDVLRSLTDSADALGQ HHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH CVNELNAAQHGFDLARQLWQQRTADTPALRPMAQQVREAVCRDVNRECDHFVLSLTATLQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHEEEEEEEEEE VPVPGRRAPQSMLHTLWLGDRTGMPLAATVTPAGRAGQAMGEADAEVATLRATLGAARPV ECCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VHMLDALPAGATLARWQQSGERWVAATRKTARVITGGAAWKLDALAETLTFHAMGEFTVR HHHHHCCCCCHHHHHHHHCCCCEEHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCEEEC GREAAQWLATADVRVPEGPVRGRGAPEGGIDAKLVIARMVDHASGELFDTRYLLCDPQLS CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECEEEEECCCCC GRAAHTARWALWADNADAQFRTLRHALDHFAQDGESAAGGSVAALQLGLTVLRLEHAPTA CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCC TAPAFLARLAGRTAARQPGGASVPGSVLNEGMGRLLALLDVLENYPGRPVVDAVEADASA HHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC EPDVQAQSNVVVGLPQLMAPGVVS CCCCCCCCCEEEECHHHCCCCCCC >Mature Secondary Structure SVAKFVAANGREAMRKVREAMGPDAVVLSNRTIDGGVEIVAMRDTDLSAASAGAQVYVA CHHHHHHCCCHHHHHHHHHHCCCCEEEEECCEECCCEEEEEEECCCCCHHCCCCEEEEE PAPVVAAPEPVVAAPEPAAIDDLRGELQSMRAMFERQLAGLAPAAAAGAVSNGDPLRESL CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHH FAWMVGAGFSAQLSRTLLARLPVGYDRPAAMTWIRGELASKVPVLDNEDTLFDQGGVLAL HHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEE IGPTGVGKTTTTAKLAARYVLRHGPERLALLTTDSFRIGAHEQLRIYGDILGVPVHAVKD ECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCHHHEEEHHHHCCCHHHHHH AADLRFALAAMKDKHLVIIDTVGMSQRDRNLSEQIAMLAGVQAPVQRVLLLNGASHGDTL HHHHHHHHHHHCCCCEEEEEECCCCCHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH NEVVHAYRHDAVPEGGGVDGCIISKLDEATHLGSVLDVVIRHRLPVFYVSTGQRVPEHLE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH LAQGASLVERAFLTPRRGSVFADADAARRQAGTLDEAPGRQGGADDVLRSLTDSADALGQ HHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH CVNELNAAQHGFDLARQLWQQRTADTPALRPMAQQVREAVCRDVNRECDHFVLSLTATLQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHEEEEEEEEEE VPVPGRRAPQSMLHTLWLGDRTGMPLAATVTPAGRAGQAMGEADAEVATLRATLGAARPV ECCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VHMLDALPAGATLARWQQSGERWVAATRKTARVITGGAAWKLDALAETLTFHAMGEFTVR HHHHHCCCCCHHHHHHHHCCCCEEHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCEEEC GREAAQWLATADVRVPEGPVRGRGAPEGGIDAKLVIARMVDHASGELFDTRYLLCDPQLS CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECEEEEECCCCC GRAAHTARWALWADNADAQFRTLRHALDHFAQDGESAAGGSVAALQLGLTVLRLEHAPTA CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCC TAPAFLARLAGRTAARQPGGASVPGSVLNEGMGRLLALLDVLENYPGRPVVDAVEADASA HHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC EPDVQAQSNVVVGLPQLMAPGVVS CCCCCCCCCEEEECHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]