| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is 73539390
Identifier: 73539390
GI number: 73539390
Start: 2386057
End: 2386869
Strand: Direct
Name: 73539390
Synonym: Reut_B5568
Alternate gene names: NA
Gene position: 2386057-2386869 (Clockwise)
Preceding gene: 73539384
Following gene: 73539393
Centisome position: 87.52
GC content: 67.9
Gene sequence:
>813_bases ATGACTGCCCCGCTGGACGCATCCCCCTTCCCGTCTGCCACCTCCACCGAGCCTGATTCCGCCGCGCTGAAGCACCTCGC CGAGGCGTTCCACAAGGATGGCTTCATCGTGCTGCGCGGCTTCGCGCCGGAGCAGACCTGTGCTGCGCTGGAAGCGGTGA CGCGCAGCCACCTGGCCACGGCCGTTCCACCGGTCGAGTTCGAGGCCGACCTCGGCTATCCCGGCGCACCCGCCACGCGC GATGCCGCCGGCGGCGGCACCGTCAGGCGATTGCGGCAGGCTTATGGACGCGATCAGGTCTTTCGCGACTGGGCGGCGAA CCCGCGCCTGACAGCTATCGTGCAGGCGCTGTTGGGCGAAGCCCCGCGCATCACGCTGGCCCACCATAACTGCGTGATGA CCAAGCATCCGCACTACGGCAGCCAGACCGGCTGGCATCGCGATACGCGCTACTGGTCGTTCGTCAGCCCGGAACTCGTG ACGGTGTGGCTGGCGCTTGGCGACGAGGACGAGAGTAACGGCGTCCTGCGCGTCATTCCCGGCTCGCACAAGGCCGTGCT GGAACCGGGCCAGCTCGATCCGGCCGAGTTCCTGATCGAGGCCCACCCGGCAAGTCAGCCGTTGCTCGAGGGCGCGGCGT CGCTGGCGTTGCACCGTGGCGACGTGCTGTTCTTCGACAGCCGGCTGTTCCATGCCGCCGGCCGCAACAGCTCGAATGCA GTCAAGCTGTCGGTGGCGTTCGCCTACTTCGGCGCCAGCAATCGTCCCGTGGACGGCACGCGTTCGGCCGAATTCGGCAG CGTCGAGCTTTAA
Upstream 100 bases:
>100_bases GGCTTTTCCTGCCTCTTCGGGCCTTGACGCGCGAGCGGCGCCGGCTTCTGGCATCATCGTCGTATCGGCCACATGTTGGC CTGGATCTCCCTCTGCCGCA
Downstream 100 bases:
>100_bases GCGTGCCCGGGGCGGGGCCTGTGGCGCTCAGGTGCGCAGGCCGACCAGCCCGGAGATCTTGTCGGCCGCTTCCAGCAGCG AAGGCAGAAAGCGCTCGCGC
Product: phytanoyl-CoA dioxygenase
Products: NA
Alternate protein names: Deoxygenase; Hypophosphite Dioxygenase; Potassium Channel Protein; Type I Secretion Membrane Fusion Protein HlyD; Phytanoyl-CoA Dioxygenase Family Protein; Phytanoyl-CoA Dioxygenase PhyH Family; Dioxygenase
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTAPLDASPFPSATSTEPDSAALKHLAEAFHKDGFIVLRGFAPEQTCAALEAVTRSHLATAVPPVEFEADLGYPGAPATR DAAGGGTVRRLRQAYGRDQVFRDWAANPRLTAIVQALLGEAPRITLAHHNCVMTKHPHYGSQTGWHRDTRYWSFVSPELV TVWLALGDEDESNGVLRVIPGSHKAVLEPGQLDPAEFLIEAHPASQPLLEGAASLALHRGDVLFFDSRLFHAAGRNSSNA VKLSVAFAYFGASNRPVDGTRSAEFGSVEL
Sequences:
>Translated_270_residues MTAPLDASPFPSATSTEPDSAALKHLAEAFHKDGFIVLRGFAPEQTCAALEAVTRSHLATAVPPVEFEADLGYPGAPATR DAAGGGTVRRLRQAYGRDQVFRDWAANPRLTAIVQALLGEAPRITLAHHNCVMTKHPHYGSQTGWHRDTRYWSFVSPELV TVWLALGDEDESNGVLRVIPGSHKAVLEPGQLDPAEFLIEAHPASQPLLEGAASLALHRGDVLFFDSRLFHAAGRNSSNA VKLSVAFAYFGASNRPVDGTRSAEFGSVEL >Mature_269_residues TAPLDASPFPSATSTEPDSAALKHLAEAFHKDGFIVLRGFAPEQTCAALEAVTRSHLATAVPPVEFEADLGYPGAPATRD AAGGGTVRRLRQAYGRDQVFRDWAANPRLTAIVQALLGEAPRITLAHHNCVMTKHPHYGSQTGWHRDTRYWSFVSPELVT VWLALGDEDESNGVLRVIPGSHKAVLEPGQLDPAEFLIEAHPASQPLLEGAASLALHRGDVLFFDSRLFHAAGRNSSNAV KLSVAFAYFGASNRPVDGTRSAEFGSVEL
Specific function: Unknown
COG id: COG5285
COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17544582, Length=231, Percent_Identity=22.0779220779221, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29027; Mature: 28896
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPLDASPFPSATSTEPDSAALKHLAEAFHKDGFIVLRGFAPEQTCAALEAVTRSHLAT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH AVPPVEFEADLGYPGAPATRDAAGGGTVRRLRQAYGRDQVFRDWAANPRLTAIVQALLGE CCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCC APRITLAHHNCVMTKHPHYGSQTGWHRDTRYWSFVSPELVTVWLALGDEDESNGVLRVIP CCEEEEEECCEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCEEEEEC GSHKAVLEPGQLDPAEFLIEAHPASQPLLEGAASLALHRGDVLFFDSRLFHAAGRNSSNA CCCCEEECCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCE VKLSVAFAYFGASNRPVDGTRSAEFGSVEL EEEEEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAPLDASPFPSATSTEPDSAALKHLAEAFHKDGFIVLRGFAPEQTCAALEAVTRSHLAT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH AVPPVEFEADLGYPGAPATRDAAGGGTVRRLRQAYGRDQVFRDWAANPRLTAIVQALLGE CCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCC APRITLAHHNCVMTKHPHYGSQTGWHRDTRYWSFVSPELVTVWLALGDEDESNGVLRVIP CCEEEEEECCEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCEEEEEC GSHKAVLEPGQLDPAEFLIEAHPASQPLLEGAASLALHRGDVLFFDSRLFHAAGRNSSNA CCCCEEECCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCE VKLSVAFAYFGASNRPVDGTRSAEFGSVEL EEEEEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA