| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is pepP [H]
Identifier: 73539294
GI number: 73539294
Start: 2263599
End: 2265017
Strand: Reverse
Name: pepP [H]
Synonym: Reut_B5472
Alternate gene names: 73539294
Gene position: 2265017-2263599 (Counterclockwise)
Preceding gene: 73539295
Following gene: 73539293
Centisome position: 83.08
GC content: 66.31
Gene sequence:
>1419_bases ATGGGCTGCGCCATCGAACCTATCGGCGTTCCCATGTTTGACAAGGGCGTCTACCGGGCACGCCGTCGCCAGCTGCGCGA GCGCGTCGGCACGGGTCTGCTGCTATTTCCCGGCAATGACCACTGCGCCATCAACTTCGCGCATAACCCGTATCCGTTCA GGCAAGACTCGACCTTCACCTACCTGTTCGGCATTCGCCGCCCCGGCCTGGCCGCATTGATCGATGCCGATAGCGGTGCG GAAACGCTGTTCGGCGACGACGCCACCGCTGACGATGAGCTGTGGCTCGGTGCACAGCCTCGCCTCCATGCGCAGGCCGA ACGTGCGGGCATTGCCAGTGTACGGCCGTTGTCGGAGATCGAAGCCGTGATCAGCACTGCCCGCAGTCAGGGGCGCACCG TGCACTACCTGCCTTCTTACCGGCACCAAACGACGCTCGATCTCGCCCGACGGCTTGAGCTGCCGGCGGCATCCGTCGCG GCAAAGTCGTCCGTCGCACTGATCCGCGCAGTGGTCGCACTGCGCGAGATCAAGAGCGCGGGCGAGGTATCCGAAGTCGA GAAGGCACTCACCGTGACGCACGCCATGCACCTTGCCGCCATGCGCATGAGCCGCCCCGGCGTGGTCGAGCGCGAGGTGG TCGCGGAGATGCGCCGCATTGCGCAATGCCACGACGTGCAGGAAGCCTATGCACCTATCTTCACGCGGCGCAAGGAAGGG CTGCATGCGCAGGTCTATGACATGCAGCTTGCAGCGGGCGACCTCGTCATCAACGACGCGGGCGCCTGCAGCGCCATGGA CTACGCCAGCGATGTCACGCGCACGCTGCCTGTTGGCGGCCGCTTCAGCGCCAGGCAGCGCGAACTGTACGAACTGCTGC TGGCGGCCCAGCTTGCCGGTATCGCCGCCATGCGTCCCGGCTTGCGCTATCTCGACCTGCACAAGGCGGTCAGCGCGGCG ATCGTGCGCGGCATGTGCGAGATGGGCTTCTTTCGCGGCGCGCCGGAGGAGATCGTCGCGGCCGGCGCCCATGCCATTTG CTTTCCGCATGGGCTGGGTCACCAGCTCGGCCTTGATGTCCATGACATGGAGGCGCTGGGCGAAGACCACGTCGGCTACG ACGACGAAGTATCGCGCAGCGGCCAGTTCGGGCTGCGCTACCTGCGCATGGGCAAGCGCCTGCGCGAAGGCATGGTCATG ACGATCGAGCCGGGCATCTATTTCATGCCGGCCCTGATCGACCGCTGGCGCGCCGAGCAACGGCACGCCGCACACATCTG TTACGCGCGCTTCGACGCCTACCGCGATTTCGGCGGCATGCGCGTCGAGGATGTGGTGCATGTCGGCGGAAAGAGCGCGC GCGTGCTCGGCCCGCACATCCCGAAGACGGTGGCCGAGGTCGAGGCGGCCATGCCGTAG
Upstream 100 bases:
>100_bases GCCCCTGCCAGTCGTTCGCCCGAGGCCGTGCGCGACGACGTGCGCAACGGCTACCTGAGCGCGGCGCAGGCCCGTGAAAT CTACGGCGTCACGGTCTGAC
Downstream 100 bases:
>100_bases TCATTCCGTTCGTCGCAGCATCCTGCGGCCGCCCGGCCAATCCGCATGCCGCAGCGCTTTCCTACCACTGAGAGAGAGAT CTTGAAGGCATCTTATTTGC
Product: Xaa-Pro dipeptidase
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase; Aminopeptidase P II; APP-II; X-Pro aminopeptidase [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MGCAIEPIGVPMFDKGVYRARRRQLRERVGTGLLLFPGNDHCAINFAHNPYPFRQDSTFTYLFGIRRPGLAALIDADSGA ETLFGDDATADDELWLGAQPRLHAQAERAGIASVRPLSEIEAVISTARSQGRTVHYLPSYRHQTTLDLARRLELPAASVA AKSSVALIRAVVALREIKSAGEVSEVEKALTVTHAMHLAAMRMSRPGVVEREVVAEMRRIAQCHDVQEAYAPIFTRRKEG LHAQVYDMQLAAGDLVINDAGACSAMDYASDVTRTLPVGGRFSARQRELYELLLAAQLAGIAAMRPGLRYLDLHKAVSAA IVRGMCEMGFFRGAPEEIVAAGAHAICFPHGLGHQLGLDVHDMEALGEDHVGYDDEVSRSGQFGLRYLRMGKRLREGMVM TIEPGIYFMPALIDRWRAEQRHAAHICYARFDAYRDFGGMRVEDVVHVGGKSARVLGPHIPKTVAEVEAAMP
Sequences:
>Translated_472_residues MGCAIEPIGVPMFDKGVYRARRRQLRERVGTGLLLFPGNDHCAINFAHNPYPFRQDSTFTYLFGIRRPGLAALIDADSGA ETLFGDDATADDELWLGAQPRLHAQAERAGIASVRPLSEIEAVISTARSQGRTVHYLPSYRHQTTLDLARRLELPAASVA AKSSVALIRAVVALREIKSAGEVSEVEKALTVTHAMHLAAMRMSRPGVVEREVVAEMRRIAQCHDVQEAYAPIFTRRKEG LHAQVYDMQLAAGDLVINDAGACSAMDYASDVTRTLPVGGRFSARQRELYELLLAAQLAGIAAMRPGLRYLDLHKAVSAA IVRGMCEMGFFRGAPEEIVAAGAHAICFPHGLGHQLGLDVHDMEALGEDHVGYDDEVSRSGQFGLRYLRMGKRLREGMVM TIEPGIYFMPALIDRWRAEQRHAAHICYARFDAYRDFGGMRVEDVVHVGGKSARVLGPHIPKTVAEVEAAMP >Mature_471_residues GCAIEPIGVPMFDKGVYRARRRQLRERVGTGLLLFPGNDHCAINFAHNPYPFRQDSTFTYLFGIRRPGLAALIDADSGAE TLFGDDATADDELWLGAQPRLHAQAERAGIASVRPLSEIEAVISTARSQGRTVHYLPSYRHQTTLDLARRLELPAASVAA KSSVALIRAVVALREIKSAGEVSEVEKALTVTHAMHLAAMRMSRPGVVEREVVAEMRRIAQCHDVQEAYAPIFTRRKEGL HAQVYDMQLAAGDLVINDAGACSAMDYASDVTRTLPVGGRFSARQRELYELLLAAQLAGIAAMRPGLRYLDLHKAVSAAI VRGMCEMGFFRGAPEEIVAAGAHAICFPHGLGHQLGLDVHDMEALGEDHVGYDDEVSRSGQFGLRYLRMGKRLREGMVMT IEPGIYFMPALIDRWRAEQRHAAHICYARFDAYRDFGGMRVEDVVHVGGKSARVLGPHIPKTVAEVEAAMP
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI149589008, Length=432, Percent_Identity=29.3981481481481, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI260593663, Length=422, Percent_Identity=29.8578199052133, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI260593665, Length=225, Percent_Identity=36.4444444444444, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI11559925, Length=432, Percent_Identity=27.5462962962963, Blast_Score=128, Evalue=1e-29, Organism=Escherichia coli, GI1789275, Length=467, Percent_Identity=28.4796573875803, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1790282, Length=439, Percent_Identity=25.7403189066059, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1788728, Length=348, Percent_Identity=28.448275862069, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17508215, Length=433, Percent_Identity=29.0993071593533, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI71989583, Length=345, Percent_Identity=26.9565217391304, Blast_Score=82, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6321118, Length=417, Percent_Identity=28.537170263789, Blast_Score=142, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6320922, Length=478, Percent_Identity=23.4309623430962, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI21357079, Length=482, Percent_Identity=28.8381742738589, Blast_Score=165, Evalue=5e-41, Organism=Drosophila melanogaster, GI19920384, Length=372, Percent_Identity=27.9569892473118, Blast_Score=105, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 51834; Mature: 51703
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS00491 PROLINE_PEPTIDASE ; PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCAIEPIGVPMFDKGVYRARRRQLRERVGTGLLLFPGNDHCAINFAHNPYPFRQDSTFT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCCCCCCCCEE YLFGIRRPGLAALIDADSGAETLFGDDATADDELWLGAQPRLHAQAERAGIASVRPLSEI EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCHHHH EAVISTARSQGRTVHYLPSYRHQTTLDLARRLELPAASVAAKSSVALIRAVVALREIKSA HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC GEVSEVEKALTVTHAMHLAAMRMSRPGVVEREVVAEMRRIAQCHDVQEAYAPIFTRRKEG CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LHAQVYDMQLAAGDLVINDAGACSAMDYASDVTRTLPVGGRFSARQRELYELLLAAQLAG CEEEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH IAAMRPGLRYLDLHKAVSAAIVRGMCEMGFFRGAPEEIVAAGAHAICFPHGLGHQLGLDV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCCCHHHCCCH HDMEALGEDHVGYDDEVSRSGQFGLRYLRMGKRLREGMVMTIEPGIYFMPALIDRWRAEQ HHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH RHAAHICYARFDAYRDFGGMRVEDVVHVGGKSARVLGPHIPKTVAEVEAAMP HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHCCC >Mature Secondary Structure GCAIEPIGVPMFDKGVYRARRRQLRERVGTGLLLFPGNDHCAINFAHNPYPFRQDSTFT CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCCCCCCCCEE YLFGIRRPGLAALIDADSGAETLFGDDATADDELWLGAQPRLHAQAERAGIASVRPLSEI EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCHHHH EAVISTARSQGRTVHYLPSYRHQTTLDLARRLELPAASVAAKSSVALIRAVVALREIKSA HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC GEVSEVEKALTVTHAMHLAAMRMSRPGVVEREVVAEMRRIAQCHDVQEAYAPIFTRRKEG CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LHAQVYDMQLAAGDLVINDAGACSAMDYASDVTRTLPVGGRFSARQRELYELLLAAQLAG CEEEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH IAAMRPGLRYLDLHKAVSAAIVRGMCEMGFFRGAPEEIVAAGAHAICFPHGLGHQLGLDV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCCCHHHCCCH HDMEALGEDHVGYDDEVSRSGQFGLRYLRMGKRLREGMVMTIEPGIYFMPALIDRWRAEQ HHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH RHAAHICYARFDAYRDFGGMRVEDVVHVGGKSARVLGPHIPKTVAEVEAAMP HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2659585; 1339425; 9278503; 9520390 [H]