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The map label for this gene is yvoA [H]

Identifier: 73539211

GI number: 73539211

Start: 2173896

End: 2174678

Strand: Reverse

Name: yvoA [H]

Synonym: Reut_B5389

Alternate gene names: 73539211

Gene position: 2174678-2173896 (Counterclockwise)

Preceding gene: 73539219

Following gene: 73539210

Centisome position: 79.77

GC content: 67.94

Gene sequence:

>783_bases
ATGAGCGAAGCCGTCGTTCCCCTGTATCACCAGATTTACGTGGTACTGCGCCAGCAGATCGTCGAGGGCCGCTTTGGCCA
GGGACCCCTGCCGGGCGAAATTGATCTCGCCAAACAGTTCCACGCATCCCGCGTGACCATGCGGCGCGTGTTCGACCGGC
TGGTCCAGGAAGGGCTCGTGCGCCGTCACCGCGGGCTGGGGACCTTCGTCAACCCGCACCCGGTCAAGGCCGCGGCTTCA
GCCGAAGAGCGCAGCGCCAGCCTGCTCGACAACATCATCGACATGGGCCAGAAGACGGCCGTGAAGGTGATCTCCATCGA
TGAGGTCCACGCCACGCCGGAAGTGGCTGAGGCGCTCGATCTCTCGCCCGGCGATCCCGTGGTGAAGATCGTGCGTGTGC
GCCACTACCGGAACCGGCCGCTGTCCCATATCACGGTCTATCTTCCCGCCGAACTAGGCCGGCCGATCACGCGCAAGTCG
CTCGAGGAACAGCCGGTGCTGCGCCTGCTGGAAAGCGGCGGTGTGCGACTCGGCCGCGCCAGCCAGACGCTGTCCGCGCG
CCTGGCCGACGTGGTGGTCGCTCCGCTGCTCGACGTGCCGGTCGGGGGCGCCCTGCTCGCGGTGCGCCGCGTGGTCAAGG
ACAGCGACGGGCGCCCGGTCCAGTTCCTGCTCGGCCAGTACCGGCCGGACCGCTACGAGTACCGCATGGAGCTCTCTCCC
GCCGGCGTCGACAGTGCCAACGTCTGGGTGGAGAACGAAACCCGCCCCGGCCTGCGCGATTGA

Upstream 100 bases:

>100_bases
ATGCCGAAAGCGGCTCATCGCACGGTCCCGCTAGGACTTATGTCTGATCTACAGTACATTAGAGGCATTACAGACTTGTC
ATGTCTCCCCAAGCGAAACC

Downstream 100 bases:

>100_bases
ACTGACCCGGCCGGCGCAGGGCGCCCAACAGCCCTGCGTGCCCAACGGGATCGCTCCATGCCGCGCGATCCCCGGCGATA
CTTCGCATTCGTGATCACTT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSEAVVPLYHQIYVVLRQQIVEGRFGQGPLPGEIDLAKQFHASRVTMRRVFDRLVQEGLVRRHRGLGTFVNPHPVKAAAS
AEERSASLLDNIIDMGQKTAVKVISIDEVHATPEVAEALDLSPGDPVVKIVRVRHYRNRPLSHITVYLPAELGRPITRKS
LEEQPVLRLLESGGVRLGRASQTLSARLADVVVAPLLDVPVGGALLAVRRVVKDSDGRPVQFLLGQYRPDRYEYRMELSP
AGVDSANVWVENETRPGLRD

Sequences:

>Translated_260_residues
MSEAVVPLYHQIYVVLRQQIVEGRFGQGPLPGEIDLAKQFHASRVTMRRVFDRLVQEGLVRRHRGLGTFVNPHPVKAAAS
AEERSASLLDNIIDMGQKTAVKVISIDEVHATPEVAEALDLSPGDPVVKIVRVRHYRNRPLSHITVYLPAELGRPITRKS
LEEQPVLRLLESGGVRLGRASQTLSARLADVVVAPLLDVPVGGALLAVRRVVKDSDGRPVQFLLGQYRPDRYEYRMELSP
AGVDSANVWVENETRPGLRD
>Mature_259_residues
SEAVVPLYHQIYVVLRQQIVEGRFGQGPLPGEIDLAKQFHASRVTMRRVFDRLVQEGLVRRHRGLGTFVNPHPVKAAASA
EERSASLLDNIIDMGQKTAVKVISIDEVHATPEVAEALDLSPGDPVVKIVRVRHYRNRPLSHITVYLPAELGRPITRKSL
EEQPVLRLLESGGVRLGRASQTLSARLADVVVAPLLDVPVGGALLAVRRVVKDSDGRPVQFLLGQYRPDRYEYRMELSPA
GVDSANVWVENETRPGLRD

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790540, Length=232, Percent_Identity=29.3103448275862, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790118, Length=194, Percent_Identity=27.8350515463918, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082252, Length=218, Percent_Identity=26.1467889908257, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788418, Length=233, Percent_Identity=25.3218884120172, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786950, Length=231, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 28848; Mature: 28716

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAVVPLYHQIYVVLRQQIVEGRFGQGPLPGEIDLAKQFHASRVTMRRVFDRLVQEGLV
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHRGLGTFVNPHPVKAAASAEERSASLLDNIIDMGQKTAVKVISIDEVHATPEVAEALD
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEHHHCCCHHHHHHHC
LSPGDPVVKIVRVRHYRNRPLSHITVYLPAELGRPITRKSLEEQPVLRLLESGGVRLGRA
CCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCEECCH
SQTLSARLADVVVAPLLDVPVGGALLAVRRVVKDSDGRPVQFLLGQYRPDRYEYRMELSP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEECC
AGVDSANVWVENETRPGLRD
CCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
SEAVVPLYHQIYVVLRQQIVEGRFGQGPLPGEIDLAKQFHASRVTMRRVFDRLVQEGLV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHRGLGTFVNPHPVKAAASAEERSASLLDNIIDMGQKTAVKVISIDEVHATPEVAEALD
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEHHHCCCHHHHHHHC
LSPGDPVVKIVRVRHYRNRPLSHITVYLPAELGRPITRKSLEEQPVLRLLESGGVRLGRA
CCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCEECCH
SQTLSARLADVVVAPLLDVPVGGALLAVRRVVKDSDGRPVQFLLGQYRPDRYEYRMELSP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEECC
AGVDSANVWVENETRPGLRD
CCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]