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The map label for this gene is qseB [H]

Identifier: 73539148

GI number: 73539148

Start: 2091566

End: 2092273

Strand: Reverse

Name: qseB [H]

Synonym: Reut_B5326

Alternate gene names: 73539148

Gene position: 2092273-2091566 (Counterclockwise)

Preceding gene: 73539149

Following gene: 73539147

Centisome position: 76.75

GC content: 68.22

Gene sequence:

>708_bases
ATGCGCGTGCTGCTGGTGGAAGACGATGCCATGATCGGCGACAGCGTGAAGCTTGCGTTGCGCCAGGAAGGCTTTGCGGT
GGACTGGGTGCAGGATGGCGAGGCGGGCCTTGCCGCGGGCACGCCAACGGGAGGCTCGGGCGGTGCCGACGAAGGCGCGT
GCTATGACCTGATCCTGCTCGACCTCGGCTTGCCGCGCCGCTCGGGGCTTGACGTGCTGCGTGCCCTGCGCGCGCGCGGC
GTGTCGACGCCGGTGCTGATCCTGACCGCACGTGACGCGATTGCCGATCGTGTGGCGGGACTCAATGCGGGCGCCGACGA
TTACCTCGTCAAGCCGTTCGACCTGCAGGAGCTGGCCGCGCGCATGCACGCGCTCGCGCGCCGCGCCGAAGGAAGGGCCG
AGCCGATCCTCAGCTACGGTGCCATTTCGCTGAACCCGGCCACGCGCGAGGTCACCCTCAATGGCGAACCGGTGCACCTG
TCCGCGCGTGAGTTCTCGCTGCTGTCGGCGCTGATGGCGCGCCCGGGCAAGGTCTGGTCGGTCGCGCAGTTGCAGGAACG
ACTGTACAGCTGGGACGACGAGGTGGGCAGCAATACGGTCGAGGTCTACATCCACGCGCTGCGCAAGAAGTTCGGCGCCG
CGCTGATCCGCAATATCCGCGGCGTGGGCTATGTCATGCCCCGGCTCGAAGAGGGACCGGGCAACTGA

Upstream 100 bases:

>100_bases
GCCTGTCTACGTGATTACCGCGAGCTATCCCGCGCTGCCGGGCCTGGCGCGCGCGCTGGCCGATACGCTCAGTCACGGCC
GCCCACATATCGGATAAGAC

Downstream 100 bases:

>100_bases
TGCGTTCGATCCAGCGAACCCTGCTGTGGTGGCTTGCGGCCGGGCTGATGGCGGGCATCGCCATCGCGACCGTGCTGATC
TACGGCCAGGCGCGGCAAGA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRVLLVEDDAMIGDSVKLALRQEGFAVDWVQDGEAGLAAGTPTGGSGGADEGACYDLILLDLGLPRRSGLDVLRALRARG
VSTPVLILTARDAIADRVAGLNAGADDYLVKPFDLQELAARMHALARRAEGRAEPILSYGAISLNPATREVTLNGEPVHL
SAREFSLLSALMARPGKVWSVAQLQERLYSWDDEVGSNTVEVYIHALRKKFGAALIRNIRGVGYVMPRLEEGPGN

Sequences:

>Translated_235_residues
MRVLLVEDDAMIGDSVKLALRQEGFAVDWVQDGEAGLAAGTPTGGSGGADEGACYDLILLDLGLPRRSGLDVLRALRARG
VSTPVLILTARDAIADRVAGLNAGADDYLVKPFDLQELAARMHALARRAEGRAEPILSYGAISLNPATREVTLNGEPVHL
SAREFSLLSALMARPGKVWSVAQLQERLYSWDDEVGSNTVEVYIHALRKKFGAALIRNIRGVGYVMPRLEEGPGN
>Mature_235_residues
MRVLLVEDDAMIGDSVKLALRQEGFAVDWVQDGEAGLAAGTPTGGSGGADEGACYDLILLDLGLPRRSGLDVLRALRARG
VSTPVLILTARDAIADRVAGLNAGADDYLVKPFDLQELAARMHALARRAEGRAEPILSYGAISLNPATREVTLNGEPVHL
SAREFSLLSALMARPGKVWSVAQLQERLYSWDDEVGSNTVEVYIHALRKKFGAALIRNIRGVGYVMPRLEEGPGN

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=49.1150442477876, Blast_Score=215, Evalue=2e-57,
Organism=Escherichia coli, GI1790552, Length=232, Percent_Identity=43.1034482758621, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1787375, Length=233, Percent_Identity=36.0515021459227, Blast_Score=140, Evalue=5e-35,
Organism=Escherichia coli, GI1790860, Length=231, Percent_Identity=35.4978354978355, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786784, Length=231, Percent_Identity=35.0649350649351, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=34.7826086956522, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=34.6491228070175, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI2367329, Length=238, Percent_Identity=33.1932773109244, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1786911, Length=214, Percent_Identity=34.5794392523364, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1789809, Length=237, Percent_Identity=30.379746835443, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=32.9004329004329, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787229, Length=232, Percent_Identity=31.8965517241379, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1790863, Length=238, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI145693140, Length=244, Percent_Identity=27.8688524590164, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=29.0598290598291, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25216; Mature: 25216

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLVEDDAMIGDSVKLALRQEGFAVDWVQDGEAGLAAGTPTGGSGGADEGACYDLILL
CEEEEECCCCCCCCHHEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE
DLGLPRRSGLDVLRALRARGVSTPVLILTARDAIADRVAGLNAGADDYLVKPFDLQELAA
ECCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHH
RMHALARRAEGRAEPILSYGAISLNPATREVTLNGEPVHLSAREFSLLSALMARPGKVWS
HHHHHHHHHCCCCCCHHHCCCEEECCCCEEEEECCCCEEECHHHHHHHHHHHHCCCCCCH
VAQLQERLYSWDDEVGSNTVEVYIHALRKKFGAALIRNIRGVGYVMPRLEEGPGN
HHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVLLVEDDAMIGDSVKLALRQEGFAVDWVQDGEAGLAAGTPTGGSGGADEGACYDLILL
CEEEEECCCCCCCCHHEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE
DLGLPRRSGLDVLRALRARGVSTPVLILTARDAIADRVAGLNAGADDYLVKPFDLQELAA
ECCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHH
RMHALARRAEGRAEPILSYGAISLNPATREVTLNGEPVHLSAREFSLLSALMARPGKVWS
HHHHHHHHHCCCCCCHHHCCCEEECCCCEEEEECCCCEEECHHHHHHHHHHHHCCCCCCH
VAQLQERLYSWDDEVGSNTVEVYIHALRKKFGAALIRNIRGVGYVMPRLEEGPGN
HHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]