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The map label for this gene is yccF [H]

Identifier: 73539146

GI number: 73539146

Start: 2089317

End: 2089772

Strand: Reverse

Name: yccF [H]

Synonym: Reut_B5323

Alternate gene names: 73539146

Gene position: 2089772-2089317 (Counterclockwise)

Preceding gene: 73539147

Following gene: 73539143

Centisome position: 76.66

GC content: 65.35

Gene sequence:

>456_bases
ATGCGCGCGATCGGCAATTTCCTCTGGTTCATCCTTGGCGGTGTCTTCATGGGCCTGGCCTGGTGGCTGGCGGGGCTGCT
GGCGTTTTGCTCGATCGTGGGTATCCCGTGGGGCAAGGCGTGCTTCGTGATCGGCAGCTTCACGTTCTTCCCGTTCGGCA
AGCAGGCGATCAGCCGGCGCGAGCTGAACCAGCGCGACGACATCGGCACCGGTGCGCTCGGCATGGTCGGCAATGTGCTG
TGGTTCGTCTTTGCCGGCATCTGGCTCGCGATCGGCCACGTGATGTCGGCCATCGCGTGCTTCGTGACCATCATCGGGAT
TCCGTTCGCGATCCAGCACCTGAAGCTGGCCGGTATCGCGCTGGCGCCGATCGGCCAGACGGTAGTGAGCAATGAGGTGG
CGGAGGCCGCGCGGCGCGAAACGGCGCGTGGCGAGGTCAACAGCCTGAGGCGGTAG

Upstream 100 bases:

>100_bases
ATCCGGACCGCTGAAGGCCCTGCGGCAGGCGCGCAGAAACGGGTACGCTTTTGCCGGCGCGTATCATCGTGCTCTCTTCT
ACTCGTCCCGGAATCCCCGC

Downstream 100 bases:

>100_bases
GGGCTAGGCGTCGTCGGACGGTTCTTCGCGGCTCGCATGGGCGACGAGCCGGTCCAGCAGGCTGGCGAGCAGCGCCTGCT
CCTGTTCGCTCAGGCAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRAIGNFLWFILGGVFMGLAWWLAGLLAFCSIVGIPWGKACFVIGSFTFFPFGKQAISRRELNQRDDIGTGALGMVGNVL
WFVFAGIWLAIGHVMSAIACFVTIIGIPFAIQHLKLAGIALAPIGQTVVSNEVAEAARRETARGEVNSLRR

Sequences:

>Translated_151_residues
MRAIGNFLWFILGGVFMGLAWWLAGLLAFCSIVGIPWGKACFVIGSFTFFPFGKQAISRRELNQRDDIGTGALGMVGNVL
WFVFAGIWLAIGHVMSAIACFVTIIGIPFAIQHLKLAGIALAPIGQTVVSNEVAEAARRETARGEVNSLRR
>Mature_151_residues
MRAIGNFLWFILGGVFMGLAWWLAGLLAFCSIVGIPWGKACFVIGSFTFFPFGKQAISRRELNQRDDIGTGALGMVGNVL
WFVFAGIWLAIGHVMSAIACFVTIIGIPFAIQHLKLAGIALAPIGQTVVSNEVAEAARRETARGEVNSLRR

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=133, Percent_Identity=39.0977443609023, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 16342; Mature: 16342

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIGNFLWFILGGVFMGLAWWLAGLLAFCSIVGIPWGKACFVIGSFTFFPFGKQAISRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHH
ELNQRDDIGTGALGMVGNVLWFVFAGIWLAIGHVMSAIACFVTIIGIPFAIQHLKLAGIA
HCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPIGQTVVSNEVAEAARRETARGEVNSLRR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MRAIGNFLWFILGGVFMGLAWWLAGLLAFCSIVGIPWGKACFVIGSFTFFPFGKQAISRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHH
ELNQRDDIGTGALGMVGNVLWFVFAGIWLAIGHVMSAIACFVTIIGIPFAIQHLKLAGIA
HCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPIGQTVVSNEVAEAARRETARGEVNSLRR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]